Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Operophtera_20brumata_20[genbank_20GCA_5F001266575.1_202015-08-11]
25,801 sequences; 638,207,720 total letters
Query= NC_003391.1
Length=205719
Score E
Sequences producing significant alignments: (Bits) Value
seq955 273 3e-68
seq4 107 3e-18
>seq955
Length=106330
Score = 273 bits (302), Expect = 3e-68
Identities = 1131/1765 (64%), Gaps = 28/1765 (2%)
Strand=Plus/Minus
Query 64839 GTGAATTGAATGG-GAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAG 64897
|||||||| || | | || | || |||||||| | || || ||||| || ||||| |
Sbjct 60339 GTGAATTGGATCGCGTTCGCA-GCCGGTTTCGTCCTCAGGTAATACATGCCAGTTTTCAA 60281
Query 64898 ACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTAT 64957
||| | ||||| ||| ||| || || |||| ||| ||| | || || || |
Sbjct 60280 ACCCATTTTCCATGCGTGAAAGTGAATTGATGTTAATTTACCATAGTTGGGTTCAGCCAC 60221
Query 64958 ATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTAT 65017
||| || || | || || || || || || || || || | || || ||||| | ||
Sbjct 60220 ATGAATGTTGAATGACTGGCTCTGGTCTATAAAAGCCCCTCGATCAGCTGCCATCTGAAT 60161
Query 65018 GATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCTTCTGGAA 65076
| ||||||| || ||| ||||| | || || || || || |||| | |||| ||||
Sbjct 60160 GCTCGTCTTGACTGAAATCTCCCAGACTGTCTTGTACAATTCTCTTATT-TCTTTGGGAA 60102
Query 65077 G-GTTTG--TATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCATCAT 65133
| || |||| || | |||||| | || || || || || || ||||
Sbjct 60101 TAGCTTCAATATTTTGGACAGATCCATTGTTGTGAATGATTAGGTTTTTCATATCTTCAT 60042
Query 65134 TCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTC 65193
||| || | |||||| | | ||| || ||||| | || || || || || || |
Sbjct 60041 CCCACAAGTCCGCCTCGGTCAGATCTCGCAGCAGATGATGGTTCACGACCTGGAACTCGC 59982
Query 65194 CAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTATTTC 65253
| |||| || || || ||| || ||| ||| | || || | ||||| ||||| |
Sbjct 59981 CCGACAGGACCCTGCGCTGGTAGATGTTAGACGTAAAAGGCTCGAAGGACTCGTTATTGC 59922
Query 65254 CCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGAC 65313
| | ||||| || || || || || ||||| ||||| | || | |||| ||||
Sbjct 59921 CGAGGATTTGTGCGGTGGAGGCGGTGGGCATCGGTGCTAATAAGAGCGAGTTTCGGAGAC 59862
Query 65314 CGTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGGTACAACNN 65373
| | | | |||||| ||||| |||| |||| | ||| || || | ||
Sbjct 59861 CATGTTTAGCGATTTTTTCTTTGAGAGCACCCCAGTCCCATAGGTCTGTGGGCGTTTTGT 59802
Query 65374 NNNNNNNNNNNNNTTGTAGAATACCGTTACTGGC-GTACGATCCTACATATGTATCGTAT 65432
||| | || || | || | | || | || || || || ||
Sbjct 59801 TCCACATGTCGTATTGCAAGATGCCCTGGCTCACCGGAC-AGCCCGGGTAAGTTTCATAA 59743
Query 65433 GGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCG 65492
|| |||||||| || || || || || ||||| ||||| || ||||||||||||
Sbjct 59742 ACGCCAATTTTCTCAGCGAGCTCGCAGCTTGCTTCTAACGCACCATAGTAAATGGTTTCG 59683
Query 65493 AAGATCTTCTTATTTAGATCTTG--TGCTTCCAGGCTATCAAATGGATAATTTAAGAGAA 65550
|| |||| | ||| | |||| ||| | || ||| | || | | || |
Sbjct 59682 AAAATCTGTTGATTCAA--CTTGATTGCAGCTTCACTTTCATACGGGATACGCATCAGGA 59625
Query 65551 TAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAGA 65610
|| || || || |||||||||||||| || ||||| || | ||| | | | || |||
Sbjct 59624 CGAAAGCATCGGCCAATCCTTGAACACCGATTCCGATCGGCCGATGCCGCATGTTTGAGT 59565
Query 65611 TTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTG-ACA 65669
| | |||||||| || || || | || | ||||| ||||| || ||||| ||| ||
Sbjct 59564 TCTTGGCTTCTGGGATCGGGTAGAAGTTCACCTCTATGATTTTGTTTAGATT-CTGCACG 59506
Query 65670 ATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAA---TCGCTCATCTATTACAAAC 65726
| | ||| || || || || || ||| | | | | ||||| | || ||
Sbjct 59505 ACGATTTTAGTGACTTCTTTTAGCTTCTCAAAGTTATACGTTTTGTCATCATTGACGAAT 59446
Query 65727 ATGTTCAATGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGT 65786
|||||| ||| || || |||| |||||| ||||| || |||| | || || |
Sbjct 59445 CTGTTCAGTGCGACGGACGCCAAATTACACACGGCAACTTCATCCGGCGACGTGTACTCA 59386
Query 65787 ATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTT 65846
| ||||| ||||| |||||||| || ||||| || || | || | |||||| || ||
Sbjct 59385 ACGATCTCCGTGCAGAGATTACTGCATTTGATAGTGCCCAGGTTCTTTTGATTGCTTTTA 59326
Query 65847 TTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATA 65906
|||| || || || || ||||| ||| |||| || || ||||| | || | ||| ||
Sbjct 59325 CTGTTGCATGCGTCTTTGTAAAGCATGTATGGGGTCCCGGTTTCGACTTGCGCTTCAATG 59266
Query 65907 ATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTATCTCTTTTCTCTT--TCGT 65964
|| || ||||| | ||| | || | | | | | || || |||||||| || |
Sbjct 59265 ATAGCCTTCCACAAAACTTGCGCTCTCACTT--GCCTCACATATCGTTTCTCTTGTTCAT 59208
Query 65965 ATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCAT 66024
|| | ||| || ||||||||||| ||||| | | ||| || ||||| || |
Sbjct 59207 ATCGCTCATATAACTTCTCGAACTCGTCCCCCCAGCAGTCGGCCAGGCCGGGACAGTCGT 59148
Query 66025 CCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAA 66084
|| ||||| | ||| || |||| || |||| |||||| || | || || |
Sbjct 59147 GGGGGCACATGAGGCTCCATTCGCCGTTGCTCTCGACTCTTTTCATGAACAAGTCTGGTA 59088
Query 66085 TCCAAAGAGCTATAAATAA-ATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTA 66143
|||| || | ||||| || ||||| | | | |||||| || || || || || ||
Sbjct 59087 TCCAGAG-CCCATAAAAAAGCTCTCTTGCGCGAACTTCCTCCTTCCCAGTGTTTTTCTTG 59029
Query 66144 AGATCGAGGAACGCCATAATATCATAATGCCACGGTTCCAAGTATATGGCCATAACTCCA 66203
||||| | |||| | | ||||| |||||||| || | ||| | || | | ||
Sbjct 59028 AGATCCAAGAACTCAAATATATCCGCGTGCCACGGCTCGAGGTAGACCGCGAAGGCGCCG 58969
Query 66204 GGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATT 66263
|| |||||||| || || || || | ||| ||||| ||||| ||||| || | | |||
Sbjct 58968 GGTCGTTTGTTCCCGCCTTGGTCGACGTACCTAGCTGTGTTGTTATAGACGCGGAGCATG 58909
Query 66264 GGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTTGCACGAAT- 66322
|| | | || ||||| || ||||| |||| ||| ||| ||| | || || ||
Sbjct 58908 GGTACGAGGCCGTTGGAGACGCCGTTGGTTCCGGCGATGTAGGATCCCTTGGCGCGGATG 58849
Query 66323 -ATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTA 66381
| | || ||| | || || || || || ||| ||||| | ||||| |||| |
Sbjct 58848 CAGT-GTACGTGA-ACGCCGATACCGCCCGCTGATTTGGAGATGAGCGCGCAATGTTTGA 58791
Query 66382 ACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACA 66441
||| || ||||||||||| || || || ||| ||||| | || || ||| || |
Sbjct 58790 GCGTGTCGTAGATGCCCTCGATGCTGTCGTCCTTCATGGCGATGAGGAAGCAGGAGGAGA 58731
Query 66442 TTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTT 66501
||| | || || |||| || | || || |||||||| || | || |
Sbjct 58730 GCTGGGGGCGGGGCGTGGCCGCCGAGAACAGCGTGGGGCTCGCGTGCGTGAAGTACTTCT 58671
Query 66502 CAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTG 66561
| || || || |||||||| | ||||| ||||| || ||| ||||| || | |
Sbjct 58670 CTGACAGCAGGTTGTACGTGTTGATAGCGGAGTCGATGTCCTCGCCGTGAATGCCGATGG 58611
Query 66562 CGACACGCATTAACATGTGCTGAGG 66586
|| ||||| | ||||||||| ||
Sbjct 58610 AAACTCGCATCAGCATGTGCTGGGG 58586
Score = 87.8 bits (96), Expect = 2e-12
Identities = 113/156 (72%), Gaps = 0/156 (0%)
Strand=Plus/Minus
Query 66808 GtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTATAATGGCATAAT 66867
||||||| || || ||||| | || |||| ||| | ||| || |||| |||||| || |
Sbjct 55892 GTTTTTTAGTCTCCTTGTGCAAGTTGGATATGGCGAGTCTGGCTGCTAGAATGGCGTAGT 55833
Query 66868 CCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCG 66927
||||||| | || || || || ||| | || || |||| | ||||||||||| |
Sbjct 55832 CCGGATGGTTGGTGGTCATCGTAGCCGCTGTCTCCGCAGCCAAGTTATCCAATTCTACGG 55773
Query 66928 TTGTTACTCCATTATATATTCCTTGGATAACCTTCA 66963
| || |||||| |||||| || ||| |||||||
Sbjct 55772 TGGTGACTCCAGAATATATGCCGCTGATTACCTTCA 55737
>seq4
Length=362500
Score = 107 bits (118), Expect = 3e-18
Identities = 252/380 (66%), Gaps = 3/380 (1%)
Strand=Plus/Minus
Query 158439 TCTGTTATGACTCCAATTAATCCCATGTTAGCGGAATCGTGTGATTCTGTCAATAAGGCA 158498
||| ||||||| ||| || || ||||| || ||| | || | || || | | ||||
Sbjct 26026 TCTCTTATGACACCAGTTCTACCGATGTTGGCTGAAGCCTGCAAATCCGTTGAAATGGCA 25967
Query 158499 TTTAAAAAATTTCCATCAGGAATGTTTGCTGAAGTCAAATACGATGGCGAGAGAGTACAA 158558
| ||||||| |||| |||||||| | ||| ||||||| ||||| || | || |||
Sbjct 25966 ATGAAAAAATGTCCAAATGGAATGTTCTCGGAAATCAAATATGATGGTGAACGTGTGCAA 25907
Query 158559 GTTCATAAAAATAATAACGAGTTTGCCTTCTTTAGTAGAAACATGAAACCAGTACTCTCT 158618
||||||||||| | ||||||| | || || | |||||||| | |
Sbjct 25906 GTTCATAAAAAGGGGAGCGAGTTTAAATATTTCTCCCGAGCTTTAAAACCAGTTATGCCG 25847
Query 158619 CATAAAGTGGATTATCTCAAAGAATACATACCGAAAGCATTTAAAAAAGCTACGTCTATC 158678
|||||||| | || | || || | | |||| |||| ||| |||| | | |||
Sbjct 25846 CATAAAGTTAGTCATTTTAAGGATTTCTTACCTCAAGCGTTTCCTAAAGGTGTGGATATG 25787
Query 158679 GTATTGGATTCTGAAATTGTTCTTGTAGACGAACATAATG---TACCGCTCCCGTTTGGA 158735
| |||||| |||| || | | || || | ||| | ||| || ||||||||
Sbjct 25786 ATTTTGGATGCTGAGGTTTTAATGGTTGATGTGAATACGGGGAAACCACTACCGTTTGGT 25727
Query 158736 AGTTTAGGTATACACAAAAAGAAAGAATATAAAAACTCTAACATGTGTTTGTTCGTGTTT 158795
| |||||||| ||||| ||| |||| |||| || | | ||| ||| ||||||
Sbjct 25726 ACATTAGGTATTCACAAGAAGTCCGAATTTAAAGGAGCTCAAGTATGTCTGTATGTGTTT 25667
Query 158796 GACTGTTTGTACTTTGATGG 158815
||||| ||||| | | ||||
Sbjct 25666 GACTGCTTGTATTATAATGG 25647
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 657960531044840
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