Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Operophtera_20brumata_20[genbank_20GCA_5F001266575.1_202015-08-11]
25,801 sequences; 638,207,720 total letters
Query= NC_003529.1
Length=155060
Score E
Sequences producing significant alignments: (Bits) Value
seq754 233 2e-56
seq955 138 1e-27
seq4530 118 1e-21
seq3481 96.9 3e-15
seq3664 89.7 5e-13
seq3754 86.0 6e-12
>seq754
Length=177731
Score = 233 bits (258), Expect = 2e-56
Identities = 353/495 (71%), Gaps = 8/495 (2%)
Strand=Plus/Plus
Query 20806 GGGTTCGCGCCATTGCCGCCCGGAAACTCCCAATCAATGTCGACGCCATCAAAGAATTTC 20865
||||| || || ||||| || || ||||||||||| || || || ||||| |||||||||
Sbjct 51107 GGGTTGGCACCTTTGCCTCCAGGGAACTCCCAATCGATATCAACACCATCGAAGAATTTC 51166
Query 20866 CACGTTTCTAGATACTCTTGGACCGAATCGAT-AAACGTTTGGCGCACGATCTTGTCGTG 20924
|| |||| || | |||| ||||| ||| ||||| | | | | ||||||| |
Sbjct 51167 CAAGTTTGCAGGAAGTCTTTCACCGATGCGACGAAACGGTCT-CTCTTGGTCTTGTCATT 51225
Query 20925 CATATGGAAAA--ATGGGTCCGAAAGTGTCCAGCCCCCGATAGACGGTAACACTTTGAGA 20982
|| | |||| |||| || | || |||||||| ||||| || || | | ||| ||
Sbjct 51226 --TAAGAAAAAGAATGGATCAGCCAGGGTCCAGCCACCGATGGATGGGAGGATTTTCAGG 51283
Query 20983 TGCGGGTTCGCCAATTTCGCGGCCATAAGTTGGCCAAAGTTGCCTTTGTACGGTTCGTTC 21042
| || ||||| |||| ||| || ||||| || ||||||||||| |||||||||
Sbjct 51284 TCAGGTTTCGCTTGTTTCAACATCATGAGCTGGCCGAAATTGCCTTTGTAAGGTTCGTTC 51343
Query 21043 CATGCGCTGACACCTTTCTGGGGTTTCTGTATGGCCGCCCACGGATCGTGAATGGCCACC 21102
|| | | |||||||||||||||||| | ||| ||||| ||||| || || | |||
Sbjct 51344 CAAGAAGACAGACCTTTCTGGGGTTTCTGCAAGGCTGCCCATGGATCATGGATTGTCACT 51403
Query 21103 TTAAAGTCGGCACGGCCCGCGCACGAACGTTGCAACGCTTCGAAACTGCCCGGGA-CACT 21161
|| ||||| | ||||| ||| |||||||||| |||| ||||||||| || | |
Sbjct 51404 TTGAAGTCCTCTCGGCCGCTGCAGGAACGTTGCAGAGCTTGGAAACTGCCTTCGATCTCC 51463
Query 21162 TTTGAGCGCATCGTTGATGCCTTCGCCTCCGCACATGGGCACGAAACCGTACAACAAATG 21221
|| | | ||||| ||||| || |||||||| || || | ||||||||||| | |||
Sbjct 51464 TTCAAAC-TGTCGTTAATGCCATCACCTCCGCAAATTGGGATGAAACCGTACAGGAGATG 51522
Query 21222 CGACAAGTTCGGTGTGGGCACTTTATCGACGGGAAACTGGCGCGGATACACACCCCATTC 21281
|| | || ||| || | || || ||||||| | || ||||| ||||||||
Sbjct 51523 CGTGAGATTTGGTACTGGGATACGGTCCACTGGAAACTTTCTGGGGTACACGCCCCATTC 51582
Query 21282 GACAAAGTATGCTCC 21296
||| ||||| |||||
Sbjct 51583 GACGAAGTAAGCTCC 51597
>seq955
Length=106330
Score = 138 bits (152), Expect = 1e-27
Identities = 287/427 (67%), Gaps = 3/427 (1%)
Strand=Plus/Minus
Query 153384 GTTTCGGAAATCTGTTTGTTCAGTAAAACGGCAGCATCGCTCACGTACGGTATGCGCAAC 153443
|||||| ||||||||| |||| | ||||| || || | ||||| || |||| |
Sbjct 59688 GTTTCGAAAATCTGTTGATTCAACTTGATTGCAGCTTCACTTTCATACGGGATACGCATC 59629
Query 153444 ATGACAAATGCATCGGCCAAACCTTGAATGCCAATGCCTATGGGACGATGGCGCATATTA 153503
| ||| || ||||||||||| ||||||| || || || || || ||||| ||||| ||
Sbjct 59628 AGGACGAAAGCATCGGCCAATCCTTGAACACCGATTCCGATCGGCCGATGCCGCATGTTT 59569
Query 153504 GAtttttttGCAGCTTCAACAGGATAGAAATTGCGGTCGATAATTTTATTTAAACTAATC 153563
|| || || || || | || ||||| || || || ||||| |||| | | |
Sbjct 59568 GAGTTCTTGGCTTCTGGGATCGGGTAGAAGTTCACCTCTATGATTTTGTTTAGATTCTGC 59509
Query 153564 ACGACATGTTTCACCACAGAATGCAACAGTTGAAAATCAAACGTTC---CATTAATGATA 153620
||||| ||| || | | | | ||| | | ||||| ||| | |||
Sbjct 59508 ACGACGATTTTAGTGACTTCTTTTAGCTTCTCAAAGTTATACGTTTTGTCATCATTGACG 59449
Query 153621 TATTTGTTGACGGCAATCGACGCCAAGTTGCAAACGGCAGTTTCGTCGGGGGCGCAATAT 153680
|| |||| | || | |||||||| || || |||||| ||| || || | ||
Sbjct 59448 AATCTGTTCAGTGCGACGGACGCCAAATTACACACGGCAACTTCATCCGGCGACGTGTAC 59389
Query 153681 TGTACTATTTCCGCACACAAATTGCTGCATTTTATCAGGCCGCAATTACTTTGATTGCTT 153740
| || || |||| || | ||| |||||||| || ||| || |||||||||||
Sbjct 59388 TCAACGATCTCCGTGCAGAGATTACTGCATTTGATAGTGCCCAGGTTCTTTTGATTGCTT 59329
Query 153741 TTGCGGTTACAAGCGTCCTTGTATAGCATGTATGGTGTGCCGGTTTCGGCTTGAATTTCT 153800
|| | ||| || ||||| ||||| ||||||||||| || ||||||||| |||| |||
Sbjct 59328 TTACTGTTGCATGCGTCTTTGTAAAGCATGTATGGGGTCCCGGTTTCGACTTGCGCTTCA 59269
Query 153801 ATAATAG 153807
|| ||||
Sbjct 59268 ATGATAG 59262
>seq4530
Length=43051
Score = 118 bits (130), Expect = 1e-21
Identities = 163/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597
|| || || | |||||| ||||| |||| || |||||||| |||||||| || || |
Sbjct 13463 CCACCGCGCAGACGCAATACTAAATGAAGGGTCGACTCTTTCTGAATGTTGTAGTCTGAC 13522
Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657
| ||||| ||||| |||||||| || ||| |||| || | ||||| || || ||
Sbjct 13523 AGTGTGCGGCCATCTTCTAGCTGTTTTCCGGCAAAGATAAGTCTCTGCTGGTCCGGGGGA 13582
Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717
|||||||| ||||| |||||| |||| | || | || || | | || |||
Sbjct 13583 ATGCCTTCCTTGTCCTGGATTTTGGCCTTTACATTCTCAATGGTATCTGAAGCTTCAACC 13642
Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765
|||| || | |||||||| |||| ||||||||||| || ||||||
Sbjct 13643 TCAAGTGTGATTGTCTTGCCAGTCAGTGTTTTTACGAAGATCTGCATA 13690
Score = 114 bits (126), Expect = 1e-20
Identities = 144/198 (73%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCA 139627
|| ||||| ||||||||||| || || || ||||| ||||| || || || |||
Sbjct 11668 GTTGACTCCTTTTGAATGTTGTAGTCTGACAGTGTGCGGCCATCTTCAAGTTGCTTGCCA 11727
Query 139628 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTTT 139687
|| |||| ||||| ||||| ||||| || |||||||| ||||| ||||||| ||
Sbjct 11728 GCGAAGATGAGACGCTGCTGGTCGGGGGGGATGCCTTCCTTGTCTTGGATTTTTGCCTTA 11787
Query 139688 AGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGTT 139747
| | || | |||||||| | ||| ||||| | || | |||||||| |||| |||
Sbjct 11788 ACATTCTCGATTGTGTCGGAAGCCTCAACCTCGAGTGTGATGGTCTTGCCAGTCAGTGTT 11847
Query 139748 TTTACGAATATTTGCATA 139765
||||| || || ||||||
Sbjct 11848 TTTACAAAGATCTGCATA 11865
Score = 105 bits (116), Expect = 7e-18
Identities = 160/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597
|| || || | ||||| || ||||| | |||||||| || || ||||| || || |
Sbjct 12779 CCACCACGCAGACGCAGTACCAAGTGTAGAGTAGACTCCTTCTGGATGTTGTAGTCTGAC 12838
Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657
| ||||| ||||| |||||||| || ||| |||| || | ||||| || || ||
Sbjct 12839 AGTGTGCGGCCATCTTCTAGCTGTTTTCCGGCAAAGATAAGTCTCTGCTGGTCCGGGGGA 12898
Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717
|||||||||||||| |||||| |||| | || | || |||| | || |||
Sbjct 12899 ATGCCTTCTTTGTCCTGGATTTTGGCCTTTACATTCTCAATGGTATCGGAAGCTTCAACC 12958
Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765
|||| || | || || || ||||| || |||||||| || ||||||
Sbjct 12959 TCAAGAGTAATGGTTTTACCAGTCAAAGTCTTTACGAAGATCTGCATA 13006
>seq3481
Length=53562
Score = 96.9 bits (106), Expect = 3e-15
Identities = 151/211 (72%), Gaps = 4/211 (2%)
Strand=Plus/Minus
Query 139556 ACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCG 139615
|| ||||||| ||||| || || || || || |||||| || |||| |||||
Sbjct 24260 ACCAAGTGAAGAGTAGATTCCTTCTGGATATTGTAATCGGACAGGGTGCGGCCATCTTCC 24201
Query 139616 AGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTG 139675
|||||||| || || |||| ||||| ||||| || || || || || || || || ||
Sbjct 24200 AGCTGTTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGCGGAATACCCTCCTTATCC-TG 24142
Query 139676 ATTTTTTGTTTTAGCTGTTC-CACTG-TGTCGGTGGGCTCCACCTCAACGGTCACCGTCT 139733
| | || | || | |||| || || |||| | || ||||||||||| ||| | ||||
Sbjct 24141 AATCTTGGCCTTCAC-GTTCTCAATGGTGTCCGAGGCCTCCACCTCAAGGGTGATGGTCT 24083
Query 139734 TGCCGGTCAACGTTTTTACGAATATTTGCAT 139764
| ||||| | ||||| ||||| || |||||
Sbjct 24082 TCCCGGTTAGGGTTTTGACGAAAATCTGCAT 24052
>seq3664
Length=101255
Score = 89.7 bits (98), Expect = 5e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597
|| ||||| | |||||| || ||||||| || || || |||||||||||||||||
Sbjct 95232 CCACCTCGGAGACGCAATACCAAGTGAAGGGTGGATTCCTTTTGAATGTTATAATCAGAA 95173
Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657
| |||| ||||| || || || |||||| |||||| ||| || || || || ||
Sbjct 95172 AGGGTGCGGCCATCTTCAAGTTGCTTCCCAGCAAAGATCAAACGCTGTTGGTCTGGGGGA 95113
Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717
||||| || ||||| || || || | | ||| | || || | | ||| ||
Sbjct 95112 ATGCCCTCCTTGTCTTGTATCTTAGCCTTCACATTTTCAATGGTATCTGAAGCCTCGACT 95053
Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764
|||| || | || ||||| || | || || ||||| ||||||||
Sbjct 95052 TCAAGAGTTATAGTTTTGCCAGTAAGGGTCTTGACGAAAATTTGCAT 95006
>seq3754
Length=50117
Score = 86.0 bits (94), Expect = 6e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597
|| ||||| | |||||| || ||||||| || || || |||||||||||||||||
Sbjct 770 CCACCTCGGAGACGCAATACCAAGTGAAGGGTGGATTCCTTTTGAATGTTATAATCAGAA 711
Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657
| |||| ||||| || || || || ||| |||||| ||| || || || || ||
Sbjct 710 AGGGTGCGGCCATCTTCAAGTTGCTTCCCGGCAAAGATCAAACGCTGTTGGTCTGGGGGA 651
Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717
||||| || ||||| || || || | | ||| | || || | | ||| ||
Sbjct 650 ATGCCCTCCTTGTCTTGTATCTTAGCCTTCACATTTTCAATGGTATCTGAAGCCTCGACT 591
Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764
|||| || | || ||||| || | || || ||||| ||||||||
Sbjct 590 TCAAGAGTTATAGTTTTGCCAGTAAGGGTCTTGACGAAAATTTGCAT 544
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 495904013159200
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