Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Operophtera_20brumata_20[genbank_20GCA_5F001266575.1_202015-08-11] 25,801 sequences; 638,207,720 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq955 320 2e-82 seq4 125 1e-23 seq137 84.2 3e-11 >seq955 Length=106330 Score = 320 bits (354), Expect = 2e-82 Identities = 1141/1764 (65%), Gaps = 26/1764 (1%) Strand=Plus/Minus Query 78718 GTGAATTGAATGG-GAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAG 78776 |||||||| || | | || | || |||||||| | || || ||||| || ||||| | Sbjct 60339 GTGAATTGGATCGCGTTCGCA-GCCGGTTTCGTCCTCAGGTAATACATGCCAGTTTTCAA 60281 Query 78777 ACCGAGACTCCATCCGTAGAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTAT 78836 ||| | ||||| ||| || || || |||| ||| ||| | || || || | Sbjct 60280 ACCCATTTTCCATGCGTGAAAGTGAATTGATGTTAATTTACCATAGTTGGGTTCAGCCAC 60221 Query 78837 ATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTAT 78896 ||| || || | || || || || || || || || || | || || ||||| | || Sbjct 60220 ATGAATGTTGAATGACTGGCTCTGGTCTATAAAAGCCCCTCGATCAGCTGCCATCTGAAT 60161 Query 78897 GATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCTTCTGGAA 78955 | ||||||| || ||| ||||| | || || || || || |||| | |||| |||| Sbjct 60160 GCTCGTCTTGACTGAAATCTCCCAGACTGTCTTGTACAATTCTCTTATT-TCTTTGGGAA 60102 Query 78956 G-GTTTG--TATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCTTCAT 79012 | || |||| || | |||||| | || || || || || ||||||| Sbjct 60101 TAGCTTCAATATTTTGGACAGATCCATTGTTGTGAATGATTAGGTTTTTCATATCTTCAT 60042 Query 79013 TCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTC 79072 ||| || | |||||| | | ||| || ||||| | || || || || || || | Sbjct 60041 CCCACAAGTCCGCCTCGGTCAGATCTCGCAGCAGATGATGGTTCACGACCTGGAACTCGC 59982 Query 79073 CAGACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCACCGATTCATTATTTC 79132 | |||| || || || ||| || ||| ||| | || || | || || ||||| | Sbjct 59981 CCGACAGGACCCTGCGCTGGTAGATGTTAGACGTAAAAGGCTCGAAGGACTCGTTATTGC 59922 Query 79133 CCAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGAC 79192 | | ||||| || || || || || ||||| ||||| | || | |||| |||| Sbjct 59921 CGAGGATTTGTGCGGTGGAGGCGGTGGGCATCGGTGCTAATAAGAGCGAGTTTCGGAGAC 59862 Query 79193 CGTATGATCTGATTTTATCTTTTAGAGATTCCCAATCCCAAAGATCAGACGGGACAACAT 79252 | | | |||||| ||||| |||| |||| ||||| || || | || | Sbjct 59861 CATGTTTAGCGATTTTTTCTTTGAGAGCACCCCAGTCCCATAGGTCTGTGGGCGTTTTGT 59802 Query 79253 TCCAAAGATCATATTGTAGAATACCGTTACT-AGCGTATGATCCTGTGTATGTTTCATAA 79311 |||| | || ||||| | || || | || | || | | || | ||| ||||||||| Sbjct 59801 TCCACATGTCGTATTGCAAGATGCCCTGGCTCACCGGAC-AGCCCGGGTAAGTTTCATAA 59743 Query 79312 GGTCCTTCCTTTTCGGCTAATTCACAACTCGCCTCTAATGCTCCGTAATAAATGGTTTCG 79371 || || || || | || || || || ||||| || || || |||||||||||| Sbjct 59742 ACGCCAATTTTCTCAGCGAGCTCGCAGCTTGCTTCTAACGCACCATAGTAAATGGTTTCG 59683 Query 79372 AAAATCTTCTTATTGAGATCTTG--TGCTTCTAGGCTATCAAATGGATAATTTAAGAGAA 79429 ||||||| | ||| | |||| ||| || || ||| | || | | || | Sbjct 59682 AAAATCTGTTGATTCAA--CTTGATTGCAGCTTCACTTTCATACGGGATACGCATCAGGA 59625 Query 79430 TAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAAA 79489 || || || || |||||||||||||| || ||||| || | ||| | | | || || Sbjct 59624 CGAAAGCATCGGCCAATCCTTGAACACCGATTCCGATCGGCCGATGCCGCATGTTTGAGT 59565 Query 79490 TTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTCCTGACTA 79549 | | |||||||| || || || | || | ||||| ||||| || |||||| || | Sbjct 59564 TCTTGGCTTCTGGGATCGGGTAGAAGTTCACCTCTATGATTTTGTTTAGATTCTGCACGA 59505 Query 79550 TTACTTTGACCACATCCTTTAGTTTGAGAAAATCAAATCGTC----CATCTATTACAAAC 79605 | ||| || || ||||| || ||| | | | ||| |||| | || || Sbjct 59504 CGATTTTAGTGACTTCTTTTAGCTTCTCAAAGTTATA-CGTTTTGTCATCATTGACGAAT 59446 Query 79606 ATGTTCAACGCGACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGT 79665 |||||| ||||| || |||| |||||| ||||| || |||| | || || | Sbjct 59445 CTGTTCAGTGCGACGGACGCCAAATTACACACGGCAACTTCATCCGGCGACGTGTACTCA 59386 Query 79666 ATTATTTCAGTGCAGAGGTTACTACACTTAATGGTTCCTAAATTTTGTTGATTACTCTTT 79725 | || || |||||||| ||||| || || || || || | || | |||||| || || Sbjct 59385 ACGATCTCCGTGCAGAGATTACTGCATTTGATAGTGCCCAGGTTCTTTTGATTGCTTTTA 59326 Query 79726 TTGTTACACGCATCCTTATAAAGAATGAACGGAGTACCAGTTTCAATCTGAGATTCTATA 79785 |||| || || || || ||||| ||| | || || || ||||| | || | ||| || Sbjct 59325 CTGTTGCATGCGTCTTTGTAAAGCATGTATGGGGTCCCGGTTTCGACTTGCGCTTCAATG 59266 Query 79786 ATCGCTTTCCAGACGACTCGAGCCTTTATTATAGACTTGTATCTCTTTTCTCTT--TCGT 79843 || || ||||| | ||| | || | | | | || || || |||||||| || | Sbjct 59265 ATAGCCTTCCACAAAACTTGCGCTCTCACTT--GCCTCACATATCGTTTCTCTTGTTCAT 59208 Query 79844 ATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGT 79903 || | |||||| ||||||||||| ||||| ||| | | || ||||| |||| Sbjct 59207 ATCGCTCATATAACTTCTCGAACTCGTCCCCCCAGCAGTCGGCCAGGCCGGGACAGTCGT 59148 Query 79904 CAGGACACATCAACGACCACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAA 79963 || ||||| | ||| || || | || |||| |||||| || | || || | Sbjct 59147 GGGGGCACATGAGGCTCCATTCGCCGTTGCTCTCGACTCTTTTCATGAACAAGTCTGGTA 59088 Query 79964 TCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAA 80023 |||| || | ||| || ||||| | | | ||||| || || || || || || | Sbjct 59087 TCCAGAGCCCATAAAAAAGCTCTCTTGCGCGAACTTCCTCCTTCCCAGTGTTTTTCTTGA 59028 Query 80024 GATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCG 80083 |||| | |||| | | ||||| | |||||||| || | ||| | || | | || | Sbjct 59027 GATCCAAGAACTCAAATATATCCGCGTGCCACGGCTCGAGGTAGACCGCGAAGGCGCCGG 58968 Query 80084 GTCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTG 80143 |||||||||| || || || || | ||| ||||| ||||| ||||| || | | ||| | Sbjct 58967 GTCGTTTGTTCCCGCCTTGGTCGACGTACCTAGCTGTGTTGTTATAGACGCGGAGCATGG 58908 Query 80144 GAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAAT-- 80201 | | | || ||||| || ||||| |||| ||| ||| ||| |||| || || Sbjct 58907 GTACGAGGCCGTTGGAGACGCCGTTGGTTCCGGCGATGTAGGATCCCTTGGCGCGGATGC 58848 Query 80202 ATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAA 80261 | | || ||| | || || || || || ||| ||||| | ||||| |||| | Sbjct 58847 AGT-GTACGTGA-ACGCCGATACCGCCCGCTGATTTGGAGATGAGCGCGCAATGTTTGAG 58790 Query 80262 CGTATCATAGATGCCCTCTATGCTATCATCAATCATGTTAAGTAGAAAACAGCTAGACAT 80321 ||| || ||||||||||| ||||| || || ||||| | || || ||| || | Sbjct 58789 CGTGTCGTAGATGCCCTCGATGCTGTCGTCCTTCATGGCGATGAGGAAGCAGGAGGAGAG 58730 Query 80322 TTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTC 80381 ||| | || || |||| || | || || |||||||| || | || || Sbjct 58729 CTGGGGGCGGGGCGTGGCCGCCGAGAACAGCGTGGGGCTCGCGTGCGTGAAGTACTTCTC 58670 Query 80382 AGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTGATGAATTCCTACCGC 80441 ||||| || |||||||| | ||||| || || || ||| ||||| || | | Sbjct 58669 TGACAGCAGGTTGTACGTGTTGATAGCGGAGTCGATGTCCTCGCCGTGAATGCCGATGGA 58610 Query 80442 GACACGCATTAACATGTGCTGAGG 80465 || ||||| | ||||||||| || Sbjct 58609 AACTCGCATCAGCATGTGCTGGGG 58586 Score = 93.3 bits (102), Expect = 6e-14 Identities = 114/156 (73%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 80687 GtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAAAATGGCATAAT 80746 ||||||| || |||||||| | || |||| ||| | |||||| |||| |||||| || | Sbjct 55892 GTTTTTTAGTCTCCTTGTGCAAGTTGGATATGGCGAGTCTGGCTGCTAGAATGGCGTAGT 55833 Query 80747 CTGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCG 80806 | ||||| | || || || || ||| | || || |||| | ||||||||||| | Sbjct 55832 CCGGATGGTTGGTGGTCATCGTAGCCGCTGTCTCCGCAGCCAAGTTATCCAATTCTACGG 55773 Query 80807 TTGTTACTCCATTATATATTCCTTGGATAACCTTCA 80842 | || |||||| |||||| || ||| ||||||| Sbjct 55772 TGGTGACTCCAGAATATATGCCGCTGATTACCTTCA 55737 >seq4 Length=362500 Score = 125 bits (138), Expect = 1e-23 Identities = 258/383 (67%), Gaps = 3/383 (1%) Strand=Plus/Minus Query 173684 ATTTCTGTTATGACTCCAATTAATCCCATGTTAGCAGAATCATGTGATTCTGTCAATAAG 173743 || ||| ||||||| ||| || || ||||| || ||| | || | || || | | | Sbjct 26029 ATATCTCTTATGACACCAGTTCTACCGATGTTGGCTGAAGCCTGCAAATCCGTTGAAATG 25970 Query 173744 GCGTTTAAAAAATTTCCATCAGGAATGTTTGCGGAAGTCAAATACGATGGTGAAAGAGTA 173803 || | ||||||| |||| |||||||| ||||| ||||||| ||||||||| | || Sbjct 25969 GCAATGAAAAAATGTCCAAATGGAATGTTCTCGGAAATCAAATATGATGGTGAACGTGTG 25910 Query 173804 CAAGTTCATAAAAATAATAACGAGTTTGCCTTCTTTAGTAGAAACATGAAACCAGTACTC 173863 |||||||||||||| | ||||||| | || || | |||||||| | Sbjct 25909 CAAGTTCATAAAAAGGGGAGCGAGTTTAAATATTTCTCCCGAGCTTTAAAACCAGTTATG 25850 Query 173864 TCTCATAAAGTGGATTATCTCAAAGAATACATACCGAAAGCATTTAAAAAAGCTACGTCT 173923 | |||||||| | || | || || | | |||| |||| ||| |||| | | | Sbjct 25849 CCGCATAAAGTTAGTCATTTTAAGGATTTCTTACCTCAAGCGTTTCCTAAAGGTGTGGAT 25790 Query 173924 ATCATATTGGATTCTGAAATTGTTCTTGTAGACGAACATAATG---TACCGCTACCGTTT 173980 || || |||||| |||| || | | || || | ||| | ||| ||||||||| Sbjct 25789 ATGATTTTGGATGCTGAGGTTTTAATGGTTGATGTGAATACGGGGAAACCACTACCGTTT 25730 Query 173981 GGAAGTTTAGGTATACACAAAAAGAAAGAATATAAAAACTCTAACATGTGTTTGTTCGTG 174040 || | |||||||| ||||| ||| |||| |||| || | | ||| ||| ||| Sbjct 25729 GGTACATTAGGTATTCACAAGAAGTCCGAATTTAAAGGAGCTCAAGTATGTCTGTATGTG 25670 Query 174041 TTTGACTGTTTGTACTTTGATGG 174063 |||||||| ||||| | | |||| Sbjct 25669 TTTGACTGCTTGTATTATAATGG 25647 >seq137 Length=194913 Score = 84.2 bits (92), Expect = 3e-11 Identities = 124/176 (70%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 50230 TAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAAT 50289 ||||||||||| | ||| ||||| || || || | || || || || ||||| ||| Sbjct 27394 TAAGTATCGATGAGCAGAGAGTACATCTCTGAGTGTACATTCTCCATTGCAATCTGGAAT 27453 Query 50290 CCGTAGAAACATCTAGCCTCGGTAATCTGCACTTCTGTACAAAATCGTTCAGCTAAATTT 50349 || ||||| ||||| || || || | |||||||||| | | |||| || | || || Sbjct 27454 CCATAGAAGCATCTTGCTTCAGTGACCTGCACTTCTTGAGAGAATCTCTCCACCAAGTTC 27513 Query 50350 TCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATG 50405 ||||| || || || || ||| || || || |||| || ||||| || || || Sbjct 27514 TCATTGACAATGCCATCGGAGGCCGCGAAGAAAGCCAGGACGTGTTTGATGAAGTG 27569 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718037149333640