Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Operophtera_20brumata_20[genbank_20GCA_5F001266575.1_202015-08-11]
25,801 sequences; 638,207,720 total letters
Query= NC_004062.1
Length=119217
Score E
Sequences producing significant alignments: (Bits) Value
seq3754 96.9 3e-15
seq3664 96.9 3e-15
seq3481 95.1 9e-15
>seq3754
Length=50117
Score = 96.9 bits (106), Expect = 3e-15
Identities = 158/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942
||||| || || | || ||||| || | |||| ||||| || | ||||||||| ||
Sbjct 1454 CCTCCTCGGAGACGCAATACCAAGTGAAGAGTGGATTCCTTCTGGATATTGTAATCAGAA 1395
Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002
| || || |||| || | || || |||||||| ||||| |||||||| || | ||
Sbjct 1394 AGGGTGCGACCGTCTTCTAGCTGCTTCCCGGCAAAGATCAAACGCTGTTGGTCTGGGGGA 1335
Query 43003 ACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACG 43062
| || || || || |||| | || || | ||| || || |||||||||
Sbjct 1334 ATGCCCTCCTTGTCTTGGATCTTAGCCTTCACATTTTCAATGGTATCTGAAGCCTCGACT 1275
Query 43063 TCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCATT 43110
|| | ||||||||||| || || || || || || ||||||||||||
Sbjct 1274 TCAAGAGTTATAGTTTTGCCAGTAAGGGTCTTGACGAAAATTTGCATT 1227
Score = 91.5 bits (100), Expect = 1e-13
Identities = 148/213 (69%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 42898 AACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCG 42957
|| ||||| || | |||| || || || | ||||||||| || | ||||| | ||
Sbjct 299 AATACCAAGTGAAGAGTGGATTCTTTCTGGATATTGTAATCAGAAAGGGTACGGCCATCT 240
Query 42958 TCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCG 43017
|| | |||||| || || || |||||||||||||| || | || | |||||||| ||
Sbjct 239 TCAAGTTGTTTTCCAGCGAAGATCAATCGCTGTTGGTCTGGGGGGATTCCTTCTTTGTCT 180
Query 43018 CTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACGTCTACCGTTATAGTT 43077
|||| | || || | ||| ||||| ||| || || || | || || ||
Sbjct 179 TGGATCTTGGCCTTCACATTTTCAATAGTGTCCGAAGCTTCAACTTCAAGAGTGATTGTC 120
Query 43078 TTTCCGGTTAGAGTTTTCACAAAAATTTGCATT 43110
||||| || || || || |||||||||||||||
Sbjct 119 TTTCCAGTAAGGGTCTTGACAAAAATTTGCATT 87
Score = 91.5 bits (100), Expect = 1e-13
Identities = 148/213 (69%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 42898 AACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCG 42957
|| ||||| || | |||| || || || | ||||||||| || | ||||| | ||
Sbjct 1211 AATACCAAGTGAAGAGTGGATTCTTTCTGGATATTGTAATCAGAAAGGGTACGGCCATCT 1152
Query 42958 TCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCG 43017
|| | |||||| || || || |||||||||||||| || | || | |||||||| ||
Sbjct 1151 TCAAGTTGTTTTCCAGCGAAGATCAATCGCTGTTGGTCTGGGGGGATTCCTTCTTTGTCT 1092
Query 43018 CTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACGTCTACCGTTATAGTT 43077
|||| | || || | ||| ||||| ||| || || || | || || ||
Sbjct 1091 TGGATCTTGGCCTTCACATTTTCAATAGTGTCCGAAGCTTCAACTTCAAGAGTGATTGTC 1032
Query 43078 TTTCCGGTTAGAGTTTTCACAAAAATTTGCATT 43110
||||| || || || || |||||||||||||||
Sbjct 1031 TTTCCAGTAAGGGTCTTGACAAAAATTTGCATT 999
Score = 86.0 bits (94), Expect = 5e-12
Identities = 146/212 (69%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 42898 AACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCG 42957
|| ||||| || | |||| || || || | ||||||||| || | ||||| | ||
Sbjct 527 AATACCAAGTGAAGAGTGGATTCTTTCTGGATATTGTAATCAGAAAGGGTACGGCCATCT 468
Query 42958 TCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCG 43017
|| | |||||| || || || |||||||||||||| || | || | |||||||| ||
Sbjct 467 TCAAGTTGTTTTCCAGCGAAGATCAATCGCTGTTGGTCTGGGGGGATTCCTTCTTTGTCT 408
Query 43018 CTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACGTCTACCGTTATAGTT 43077
|||| | || || | ||| ||||| ||| || || || | || || |||
Sbjct 407 TGGATCTTGGCCTTCACATTTTCAATGGTGTCCGAAGCTTCTACTTCAAGTGTGATGGTT 348
Query 43078 TTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109
|| || || || || |||||||| || |||||
Sbjct 347 TTACCTGTGAGGGTCTTCACAAAGATCTGCAT 316
>seq3664
Length=101255
Score = 96.9 bits (106), Expect = 3e-15
Identities = 158/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942
||||| || || | || ||||| || | |||| ||||| || | ||||||||| ||
Sbjct 95916 CCTCCTCGGAGACGCAATACCAAGTGAAGAGTGGATTCCTTCTGGATATTGTAATCAGAA 95857
Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002
| || || |||| || | || || |||||||| ||||| |||||||| || | ||
Sbjct 95856 AGGGTGCGACCGTCTTCTAGCTGCTTCCCGGCAAAGATCAAACGCTGTTGGTCTGGGGGA 95797
Query 43003 ACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACG 43062
| || || || || |||| | || || | ||| || || |||||||||
Sbjct 95796 ATGCCCTCCTTGTCTTGGATCTTAGCCTTCACATTTTCAATGGTATCTGAAGCCTCGACT 95737
Query 43063 TCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCATT 43110
|| | ||||||||||| || || || || || || ||||||||||||
Sbjct 95736 TCAAGAGTTATAGTTTTGCCAGTAAGGGTCTTGACGAAAATTTGCATT 95689
Score = 87.8 bits (96), Expect = 1e-12
Identities = 147/213 (69%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 42898 AACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCG 42957
|| ||||| || | |||| || || || | ||||||||| || | ||||| | ||
Sbjct 94761 AATACCAAGTGAAGAGTGGATTCTTTCTGGATATTGTAATCAGAAAGGGTACGGCCATCT 94702
Query 42958 TCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCG 43017
|| | |||||| || || || |||||||||||||| || | || | |||||||| ||
Sbjct 94701 TCAAGTTGTTTTCCAGCGAAGATCAATCGCTGTTGGTCTGGGGGGATTCCTTCTTTGTCT 94642
Query 43018 CTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACGTCTACCGTTATAGTT 43077
|||| | || || | ||| ||||| ||| || || || | || || ||
Sbjct 94641 TGGATCTTGGCCTTCACATTTTCAATAGTGTCCGAAGCTTCAACTTCAAGAGTGATTGTC 94582
Query 43078 TTTCCGGTTAGAGTTTTCACAAAAATTTGCATT 43110
||||| || || || || |||||||| ||||||
Sbjct 94581 TTTCCAGTAAGGGTCTTGACAAAAATCTGCATT 94549
Score = 86.0 bits (94), Expect = 5e-12
Identities = 146/212 (69%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 42898 AACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCG 42957
|| ||||| || | |||| || || || | ||||||||| || | ||||| | ||
Sbjct 94989 AATACCAAGTGAAGAGTGGATTCTTTCTGGATATTGTAATCAGAAAGGGTACGGCCATCT 94930
Query 42958 TCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCG 43017
|| | |||||| || || || |||||||||||||| || | || | |||||||| ||
Sbjct 94929 TCAAGTTGTTTTCCAGCGAAGATCAATCGCTGTTGGTCTGGGGGGATTCCTTCTTTGTCT 94870
Query 43018 CTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACGTCTACCGTTATAGTT 43077
|||| | || || | ||| ||||| ||| || || || | || || |||
Sbjct 94869 TGGATCTTGGCCTTCACATTTTCAATGGTGTCCGAAGCTTCTACTTCAAGTGTGATGGTT 94810
Query 43078 TTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109
|| || || || || |||||||| || |||||
Sbjct 94809 TTACCTGTGAGGGTCTTCACAAAGATCTGCAT 94778
>seq3481
Length=53562
Score = 95.1 bits (104), Expect = 9e-15
Identities = 161/231 (70%), Gaps = 2/231 (1%)
Strand=Plus/Minus
Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942
||||| | || || | |||||| || | ||| ||||| || | |||||||||||||
Sbjct 24278 CCTCCTCTTAGCCTGAGCACCAAGTGAAGAGTAGATTCCTTCTGGATATTGTAATCGGAC 24219
Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002
| || || | || |||| ||||||||||| || || | ||||| || || | |||
Sbjct 24218 AGGGTGCGGCCATCTTCCAGCTGTTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGCGGA 24159
Query 43003 ACACCTTCTTTTTCGCTG-ATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGAC 43061
| ||| || || || ||| ||| | || || | ||| ||||| ||||| ||
Sbjct 24158 ATACCCTCCTTATC-CTGAATCTTGGCCTTCACGTTCTCAATGGTGTCCGAGGCCTCCAC 24100
Query 43062 GTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCATTTT 43112
|| | || || || || |||||||| ||||| || ||||| ||||||||
Sbjct 24099 CTCAAGGGTGATGGTCTTCCCGGTTAGGGTTTTGACGAAAATCTGCATTTT 24049
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 381249678448458
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |