Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Operophtera_20brumata_20[genbank_20GCA_5F001266575.1_202015-08-11]
25,801 sequences; 638,207,720 total letters
Query= NC_004105.1
Length=209771
Score E
Sequences producing significant alignments: (Bits) Value
seq955 273 3e-68
seq4 116 5e-21
>seq955
Length=106330
Score = 273 bits (302), Expect = 3e-68
Identities = 1083/1692 (64%), Gaps = 22/1692 (1%)
Strand=Plus/Minus
Query 70827 TTTCGTACGTAGATAGTACATGCCTGTTTTTAGACCGAGACTCCATCCGTAAAAATGCAT 70886
|||||| | || || |||||||| ||||| | ||| | ||||| ||| ||| || ||
Sbjct 60313 TTTCGTCCTCAGGTAATACATGCCAGTTTTCAAACCCATTTTCCATGCGTGAAAGTGAAT 60254
Query 70887 ACTCGTTAGTTTGGAATAGCTAGGATCGGCTATGTGAATATTCATCGACTGACTTTGATC 70946
|||| ||| |||| | || || || | ||||| || | ||||| || || ||
Sbjct 60253 TGATGTTAATTTACCATAGTTGGGTTCAGCCACATGAATGTTGAATGACTGGCTCTGGTC 60194
Query 70947 GATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAAT 71006
|| || || || | || || ||||| | ||| ||||||| || ||| ||||| |
Sbjct 60193 TATAAAAGCCCCTCGATCAGCTGCCATCTGAATGCTCGTCTTGACTGAAATCTCCCAGAC 60134
Query 71007 AGTTTTATA-AACTCGCTTAATATCTTCTGGAAG-GTTTG--TATTCTGAATGGATCCAC 71062
|| || || || || |||| | |||| |||| | || |||| || | ||||||
Sbjct 60133 TGTCTTGTACAATTCTCTTATT-TCTTTGGGAATAGCTTCAATATTTTGGACAGATCCAT 60075
Query 71063 CATCTGCAATAATCCTATTTTTGATCTCTTCATTCCATAATTTTCTCTCGGTTAAAACTC 71122
| ||| || ||||| || ||||||| ||| || | |||||| | | |||
Sbjct 60074 TGTTGTGAATGATTAGGTTTTTCATATCTTCATCCCACAAGTCCGCCTCGGTCAGATCTC 60015
Query 71123 TAAGGAGATGAGGATTAACTACTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATAT 71182
|| |||||| | || || || || || || || |||| || || || ||| || |
Sbjct 60014 GCAGCAGATGATGGTTCACGACCTGGAACTCGCCCGACAGGACCCTGCGCTGGTAGATGT 59955
Query 71183 TACTGGTATACGGTTCCACTGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCG 71242
|| ||| | || || | ||||| ||||| || | ||||| || || || || || |
Sbjct 59954 TAGACGTAAAAGGCTCGAAGGACTCGTTATTGCCGAGGATTTGTGCGGTGGAGGCGGTGG 59895
Query 71243 GCATAGGTGCCACCAATAGACTATTTCTAAGACCATGTGATCGGATTTTATCTTTTAGAG 71302
|||| ||||| | || || |||| ||||||||| |||||| ||||| ||||
Sbjct 59894 GCATCGGTGCTAATAAGAGCGAGTTTCGGAGACCATGTTTAGCGATTTTTTCTTTGAGAG 59835
Query 71303 ATTCCCAATTCCAAAGATCCGATGGTACAACNNNNNNNNNNNNNNNNNNNNNNATGCCGT 71362
|||| | ||| || || | || ||||| |
Sbjct 59834 CACCCCAGTCCCATAGGTCTGTGGGCGTTTTGTTCCACATGTCGTATTGCAAGATGCCCT 59775
Query 71363 TACT-AGCGTATGATCCTGCATATGTATCGTATGGTCCTTCTTTTTCGGCTAGTTCACAA 71421
|| | || | | || | || || || || || ||| || || || || ||
Sbjct 59774 GGCTCACCGGAC-AGCCCGGGTAAGTTTCATAAACGCCAATTTTCTCAGCGAGCTCGCAG 59716
Query 71422 CTCGCCTCTAATGCTCCATAATAAATGGTTTCGAAAATCTTCTTATTGAGATCTTG--TG 71479
|| || ||||| || ||||| ||||||||||||||||||| | ||| | |||| ||
Sbjct 59715 CTTGCTTCTAACGCACCATAGTAAATGGTTTCGAAAATCTGTTGATTCAA--CTTGATTG 59658
Query 71480 CTTCCGGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACGC 71539
| | || ||| | || | | || | || || || || ||||||||||| |
Sbjct 59657 CAGCTTCACTTTCATACGGGATACGCATCAGGACGAAAGCATCGGCCAATCCTTGAACAC 59598
Query 71540 CAATACCGATAGGTCTGTGTCTCTTATTAGAAATTTCAGCTTCTGGAATAGGATAATAAT 71599
| || ||||| || | || | | | || || | | |||||||| || || || | |
Sbjct 59597 CGATTCCGATCGGCCGATGCCGCATGTTTGAGTTCTTGGCTTCTGGGATCGGGTAGAAGT 59538
Query 71600 TAATATCTATAATTTTATTGAGATTTCTG-ACTATTACTTTGACCACATCCTTTAGTTTG 71658
| | ||||| ||||| || ||| ||||| || | | ||| || || ||||| ||
Sbjct 59537 TCACCTCTATGATTTTGTTTAGA-TTCTGCACGACGATTTTAGTGACTTCTTTTAGCTTC 59479
Query 71659 AGAAAATCAAA---TCTCCCATCTATTACAAACACGTTCAAGGCAACAGATGCCAGATTA 71715
||| | | | | | |||| | || || ||||| || || || |||| ||||
Sbjct 59478 TCAAAGTTATACGTTTTGTCATCATTGACGAATCTGTTCAGTGCGACGGACGCCAAATTA 59419
Query 71716 CAAACGGCTACCTCATTAGCATCGGCATATTGTATAATTTCAGTGCAAAGATTACTACAC 71775
|| ||||| || |||| | | || | | || || ||||| |||||||| ||
Sbjct 59418 CACACGGCAACTTCATCCGGCGACGTGTACTCAACGATCTCCGTGCAGAGATTACTGCAT 59359
Query 71776 TTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATA 71835
||||| || || | || | |||||| || || |||| || || || || ||||| ||
Sbjct 59358 TTGATAGTGCCCAGGTTCTTTTGATTGCTTTTACTGTTGCATGCGTCTTTGTAAAGCATG 59299
Query 71836 AACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTT 71895
| || || || ||||| | || | ||| || || || ||||| | ||| | || |
Sbjct 59298 TATGGGGTCCCGGTTTCGACTTGCGCTTCAATGATAGCCTTCCACAAAACTTGCGCTCTC 59239
Query 71896 ATTATATTCTTGTATCTCTTTTCTCTTTCGTATTGTGTATATAATCGTTCGAACTCGTCT 71955
| | || |||| || ||| ||| ||| | |||||| |||||||||||
Sbjct 59238 ACTTGCCTCACATATCGTTTCTCTTGTTCATATCGCTCATATAACTTCTCGAACTCGTC- 59180
Query 71956 CCCCAAGCA-TTGTCTAATCCAGGACATTCATTCGGACACATCAATGACCACTCTCCATC 72014
|||| |||| | | | | || ||||| || | || ||||| | ||| || || |
Sbjct 59179 CCCCCAGCAGTCGGCCAGGCCGGGACAGTCGTGGGGGCACATGAGGCTCCATTCGCCGTT 59120
Query 72015 ATCATTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGT 72074
| |||| |||||| || | || || ||||| || | ||| || ||||| |
Sbjct 59119 GCTCTCGACTCTTTTCATGAACAAGTCTGGTATCCAGAGCCCATAAAAAAGCTCTCTTGC 59060
Query 72075 TCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATG 72134
| | ||||| || || || || || || ||||| | |||| | | ||||| | ||
Sbjct 59059 GCGAACTTCCTCCTTCCCAGTGTTTTTCTTGAGATCCAAGAACTCAAATATATCCGCGTG 59000
Query 72135 CCACGGTTCCAAGTATATGGCCATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTA 72194
|||||| || | ||| | || | | || || |||||||| || || || || | |||
Sbjct 58999 CCACGGCTCGAGGTAGACCGCGAAGGCGCCGGGTCGTTTGTTCCCGCCTTGGTCGACGTA 58940
Query 72195 TCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGT 72254
||||| ||||| ||||| || | | ||| || | | || ||||| | || |||||
Sbjct 58939 CCTAGCTGTGTTGTTATAGACGCGGAGCATGGGTACGAGGCCGTTGGAGACGCCGTTGGT 58880
Query 72255 CCCGGAGATATAGCTTCCACTGGCACGAAT--ATTGCTAATTGATAGACCTATTCCCCCT 72312
|||| ||| ||| ||| |||| || || | || || ||| | || || || ||
Sbjct 58879 TCCGGCGATGTAGGATCCCTTGGCGCGGATGCAGTG-TACGTGA-ACGCCGATACCGCCC 58822
Query 72313 GCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCA 72372
|| ||| ||||| | ||||| |||| | ||| || ||||||||||| || || ||
Sbjct 58821 GCTGATTTGGAGATGAGCGCGCAATGTTTGAGCGTGTCGTAGATGCCCTCGATGCTGTCG 58762
Query 72373 TCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAAT 72432
||| ||||| | || || ||| || | ||| | || || |||| ||
Sbjct 58761 TCCTTCATGGCGATGAGGAAGCAGGAGGAGAGCTGGGGGCGGGGCGTGGCCGCCGAGAAC 58702
Query 72433 AAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCT 72492
| || || |||||||| || | || || ||||| || |||||||| | |||||
Sbjct 58701 AGCGTGGGGCTCGCGTGCGTGAAGTACTTCTCTGACAGCAGGTTGTACGTGTTGATAGCG 58642
Query 72493 GATTCTATATCC 72504
|| || || |||
Sbjct 58641 GAGTCGATGTCC 58630
Score = 96.9 bits (106), Expect = 5e-15
Identities = 115/156 (74%), Gaps = 0/156 (0%)
Strand=Plus/Minus
Query 72770 GtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGGCATAAT 72829
||||||| || |||||||| | || |||| ||| | |||||| ||||||||||| || |
Sbjct 55892 GTTTTTTAGTCTCCTTGTGCAAGTTGGATATGGCGAGTCTGGCTGCTAGAATGGCGTAGT 55833
Query 72830 CTGGATGTTGTGTAGTACAAGTGGCTGCTATTTCTGCTGCCAGAGTGTCCAATTCTACCG 72889
| ||||| | || || || || ||| | || || |||| | ||||||||||| |
Sbjct 55832 CCGGATGGTTGGTGGTCATCGTAGCCGCTGTCTCCGCAGCCAAGTTATCCAATTCTACGG 55773
Query 72890 TTGTTACTCCATTATATATTCCTTGGATAACCTTCA 72925
| || |||||| |||||| || ||| |||||||
Sbjct 55772 TGGTGACTCCAGAATATATGCCGCTGATTACCTTCA 55737
>seq4
Length=362500
Score = 116 bits (128), Expect = 5e-21
Identities = 256/383 (67%), Gaps = 3/383 (1%)
Strand=Plus/Minus
Query 165033 ATTTCTGTTATGACTCCAATTAATCCCATGTTAGCGGAATCGTGTGATTCTGTCAATAAG 165092
|| ||| ||||||| ||| || || ||||| || ||| | || | || || | | |
Sbjct 26029 ATATCTCTTATGACACCAGTTCTACCGATGTTGGCTGAAGCCTGCAAATCCGTTGAAATG 25970
Query 165093 GCGTTTAAAAAATTTCCATCAGGAATGTTTGCGGAAGTCAAATACGATGGTGAAAGAGTA 165152
|| | ||||||| |||| |||||||| ||||| ||||||| ||||||||| | ||
Sbjct 25969 GCAATGAAAAAATGTCCAAATGGAATGTTCTCGGAAATCAAATATGATGGTGAACGTGTG 25910
Query 165153 CAAGTTCATaaaaaaaaTAACGAGTTTGCCTTCTTTAGTAGAAACATGAAACCAGTACTC 165212
|||||||||||||| | ||||||| | || || | |||||||| |
Sbjct 25909 CAAGTTCATAAAAAGGGGAGCGAGTTTAAATATTTCTCCCGAGCTTTAAAACCAGTTATG 25850
Query 165213 TCTCATAAAGTGGATTATCTCAAAGAATACATACCGAAAGCATTTAAAAAAGCTACGTCT 165272
| |||||||| | || | || || | | |||| |||| ||| |||| | | |
Sbjct 25849 CCGCATAAAGTTAGTCATTTTAAGGATTTCTTACCTCAAGCGTTTCCTAAAGGTGTGGAT 25790
Query 165273 ATCGTATTGGATTCTGAAATTGTTCTTGTAGACGAACATAATGT---ACCGCTACCGTTT 165329
|| | |||||| |||| || | | || || | ||| | ||| |||||||||
Sbjct 25789 ATGATTTTGGATGCTGAGGTTTTAATGGTTGATGTGAATACGGGGAAACCACTACCGTTT 25730
Query 165330 GGAAGTTTAGGTATACACAAAAAGAAAGAATATAAAAACTCTAACATGTGTTTGTTCGTG 165389
|| | |||||||| ||||| ||| |||| |||| || | | ||| ||| |||
Sbjct 25729 GGTACATTAGGTATTCACAAGAAGTCCGAATTTAAAGGAGCTCAAGTATGTCTGTATGTG 25670
Query 165390 TTTGACTGTTTGCACTTTGATGG 165412
|||||||| ||| | | | ||||
Sbjct 25669 TTTGACTGCTTGTATTATAATGG 25647
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 670922749218760
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