Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Operophtera_20brumata_20[genbank_20GCA_5F001266575.1_202015-08-11]
25,801 sequences; 638,207,720 total letters
Query= NC_005038.1
Length=99657
Score E
Sequences producing significant alignments: (Bits) Value
seq4530 98.7 6e-16
seq3754 95.1 8e-15
seq3664 89.7 3e-13
>seq4530
Length=43051
Score = 98.7 bits (108), Expect = 6e-16
Identities = 161/231 (70%), Gaps = 6/231 (3%)
Strand=Plus/Plus
Query 33142 ACCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGA 33201
||| |||| | ||||| || ||||| | ||||||||||| || || ||||| || ||
Sbjct 12321 ACCACCTCGAAGGCGCAATACTAAATGAAGCGTCGACTCTTTCTGAATGTTGTAGTCGGA 12380
Query 33202 CAAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGG 33261
|| || || ||| |||| ||||||||| || || | ||| |||||||| | |||
Sbjct 12381 CAGTGTGCGTCCGTCTTCCAGTTGCTTTCCGGCGAAGATAAGACGCTGCTGGTCTGGGGG 12440
Query 33262 TATGCCTTCTTTTTC---GCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTG 33318
|||||||| || || | | | || ||| || | | |||||| ||| | ||
Sbjct 12441 GATGCCTTCCTTGTCCTGGATTTTAGC---TTTAACATTCTCAATCGTATCGGAAGCTTC 12497
Query 33319 AACGTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369
||| || || || || || || || || | ||| |||||||| || |||||
Sbjct 12498 AACCTCAAGTGTAATGGTCTTGCCAGTCAAAGTCTTTACGAAGATCTGCAT 12548
Score = 93.3 bits (102), Expect = 3e-14
Identities = 152/218 (70%), Gaps = 6/218 (3%)
Strand=Plus/Plus
Query 33155 CGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGG 33214
|||| |||||| || | || || ||||| || || ||||| ||||| | | || ||
Sbjct 12106 CGCAGCACCAAGTGAAGGGTTGATTCTTTCTGAATGTTGTAGTCAGATAGAGTGCGTCCA 12165
Query 33215 TCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTT 33274
|| || | ||||| ||| || || | | |||||||| | || || ||||||||
Sbjct 12166 TCTTCTAGCTGCTTGCCAGCGAAAATAAGTCTCTGCTGGTCTGGAGGAATACCTTCTTTA 12225
Query 33275 TC---GCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTT 33331
|| | | | || |||||| | | ||| ||||| || | ||| |||| ||||
Sbjct 12226 TCCTGGATTTTGGC---TTTTACGTTCTCAATAGTGTCAGAGGCCTCAACTTCCAAAGTT 12282
Query 33332 ATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369
|| ||||| || || |||||||| ||||||||||||||
Sbjct 12283 ATAGTTTTGCCAGTTAGAGTTTTAACGAAAATTTGCAT 12320
Score = 93.3 bits (102), Expect = 3e-14
Identities = 152/218 (70%), Gaps = 6/218 (3%)
Strand=Plus/Plus
Query 33155 CGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGG 33214
||||| || || || | ||||||||||| || || ||||| || |||| || || |
Sbjct 13019 CGCAATACTAAGTGAAGGGTCGACTCTTTCTGAATGTTGTAGTCCGACAGTGTGCGTCCG 13078
Query 33215 TCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTT 33274
|| |||| ||||||||| || || | ||| |||||||| | ||| |||||||| ||
Sbjct 13079 TCTTCCAGTTGCTTTCCGGCGAAGATAAGACGCTGCTGGTCTGGGGGGATGCCTTCCTTG 13138
Query 33275 TC---GCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTT 33331
|| | | | || ||| || | | |||||| ||| | || ||| || || ||
Sbjct 13139 TCCTGGATTTTAGC---TTTAACATTCTCAATCGTATCGGAAGCTTCAACCTCAAGTGTA 13195
Query 33332 ATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369
|| || || || || | ||| |||||||| || |||||
Sbjct 13196 ATGGTCTTGCCAGTCAAAGTCTTTACGAAGATCTGCAT 13233
Score = 87.8 bits (96), Expect = 1e-12
Identities = 151/218 (69%), Gaps = 5/218 (2%)
Strand=Plus/Plus
Query 33155 CGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGG 33214
||||| || ||||| | ||||||||||| || || ||||| || |||| || || |
Sbjct 12562 CGCAATACTAAATGAAGGGTCGACTCTTTCTGAATGTTGTAGTCCGACAGTGTGCGTCCG 12621
Query 33215 TCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTT 33274
|| |||| ||||||||| || || | ||| |||||||| | ||| |||||||| ||
Sbjct 12622 TCTTCCAGTTGCTTTCCGGCGAAGATAAGACGCTGCTGGTCTGGGGGGATGCCTTCCTTG 12681
Query 33275 TC---GCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTT 33331
|| | | | ||| ||| || | | ||| || ||| | || ||| || || ||
Sbjct 12682 TCCTGGATTTTGGCC--TTTAACATTCTCAATGGTATCGGAAGCTTCAACCTCAAGTGTG 12739
Query 33332 ATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369
|| || || || || | || || ||||| || |||||
Sbjct 12740 ATGGTCTTGCCAGTCAAGGTCTTAACGAAGATCTGCAT 12777
>seq3754
Length=50117
Score = 95.1 bits (104), Expect = 8e-15
Identities = 165/235 (70%), Gaps = 14/235 (6%)
Strand=Plus/Minus
Query 33142 ACCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGA 33201
|||||||| | ||||| ||||| || | || || ||||| || ||||||||||||||
Sbjct 315 ACCGCCTCGGAGACGCAATACCAAGTGAAGAGTGGATTCTTTCTGGATATTGTAATCAGA 256
Query 33202 CAAATTGAGTT-GGTCATC--CAA-TTGCTTTCCACTAAATATTAAACGTTGCTGGTCCG 33257
| | || || |||| ||| ||| |||||| || || || || || ||||| |
Sbjct 255 AA----GGGTACGGCCATCTTCAAGTTGTTTTCCAGCGAAGATCAATCGCTGTTGGTCTG 200
Query 33258 TGGGTATGCCTTCTTTTTCGCTAATC---GCCTGTTTTACTGTTTGAATCGTGTCGTTGG 33314
||| || |||||||| || ||| |||| | || ||| ||| ||||| |
Sbjct 199 GGGGGATTCCTTCTTTGTCTTGGATCTTGGCCT---TCACATTTTCAATAGTGTCCGAAG 143
Query 33315 GTTGAACGTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369
|| ||| || ||||| || || ||||| ||||| || || || |||||||||||
Sbjct 142 CTTCAACTTCAAGAGTGATTGTCTTTCCAGTAAGGGTCTTGACAAAAATTTGCAT 88
Score = 89.7 bits (98), Expect = 3e-13
Identities = 156/222 (70%), Gaps = 14/222 (6%)
Strand=Plus/Minus
Query 33155 CGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTT-G 33213
||||| ||||| || | || || ||||| || |||||||||||||| | | || |
Sbjct 1214 CGCAATACCAAGTGAAGAGTGGATTCTTTCTGGATATTGTAATCAGAAA----GGGTACG 1159
Query 33214 GTCATC--CAA-TTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTC 33270
| |||| ||| ||| |||||| || || || || || ||||| | ||| || |||||
Sbjct 1158 GCCATCTTCAAGTTGTTTTCCAGCGAAGATCAATCGCTGTTGGTCTGGGGGGATTCCTTC 1099
Query 33271 TTTTTCGCTAATC---GCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAG 33327
||| || ||| |||| | || ||| ||| ||||| | || ||| || ||
Sbjct 1098 TTTGTCTTGGATCTTGGCCT---TCACATTTTCAATAGTGTCCGAAGCTTCAACTTCAAG 1042
Query 33328 AGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369
||| || || ||||| ||||| || || || |||||||||||
Sbjct 1041 AGTGATTGTCTTTCCAGTAAGGGTCTTGACAAAAATTTGCAT 1000
Score = 84.2 bits (92), Expect = 1e-11
Identities = 158/231 (68%), Gaps = 6/231 (3%)
Strand=Plus/Minus
Query 33142 ACCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGA 33201
||| |||| | ||||| ||||| || | || || || || || ||||||||||||||
Sbjct 1455 ACCTCCTCGGAGACGCAATACCAAGTGAAGAGTGGATTCCTTCTGGATATTGTAATCAGA 1396
Query 33202 CAAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGG 33261
| || | ||| || | ||||| || ||| || ||||| || ||||| | |||
Sbjct 1395 AAGGGTGCGACCGTCTTCTAGCTGCTTCCCGGCAAAGATCAAACGCTGTTGGTCTGGGGG 1336
Query 33262 TATGCCTTCTTT---TTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTG 33318
||||| || || || | | | ||| || || ||| ||| || || | |
Sbjct 1335 AATGCCCTCCTTGTCTTGGATCTTAGCC---TTCACATTTTCAATGGTATCTGAAGCCTC 1279
Query 33319 AACGTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369
|| || |||||||| ||||| || ||||| || || ||||||||||||||
Sbjct 1278 GACTTCAAGAGTTATAGTTTTGCCAGTAAGGGTCTTGACGAAAATTTGCAT 1228
>seq3664
Length=101255
Score = 89.7 bits (98), Expect = 3e-13
Identities = 164/235 (70%), Gaps = 14/235 (6%)
Strand=Plus/Minus
Query 33142 ACCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGA 33201
|||||||| | ||||| ||||| || | || || ||||| || ||||||||||||||
Sbjct 94777 ACCGCCTCGGAGACGCAATACCAAGTGAAGAGTGGATTCTTTCTGGATATTGTAATCAGA 94718
Query 33202 CAAATTGAGT-TGGTCATC--CAA-TTGCTTTCCACTAAATATTAAACGTTGCTGGTCCG 33257
| | || || |||| ||| ||| |||||| || || || || || ||||| |
Sbjct 94717 AA----GGGTACGGCCATCTTCAAGTTGTTTTCCAGCGAAGATCAATCGCTGTTGGTCTG 94662
Query 33258 TGGGTATGCCTTCTTT---TTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGG 33314
||| || |||||||| || | | | ||| || || ||| ||| ||||| |
Sbjct 94661 GGGGGATTCCTTCTTTGTCTTGGATCTTGGCC---TTCACATTTTCAATAGTGTCCGAAG 94605
Query 33315 GTTGAACGTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369
|| ||| || ||||| || || ||||| ||||| || || || ||||| |||||
Sbjct 94604 CTTCAACTTCAAGAGTGATTGTCTTTCCAGTAAGGGTCTTGACAAAAATCTGCAT 94550
Score = 87.8 bits (96), Expect = 1e-12
Identities = 151/218 (69%), Gaps = 6/218 (3%)
Strand=Plus/Minus
Query 33155 CGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGG 33214
||||| |||| ||| | || || |||||||| || ||||| || || | || |
Sbjct 94536 CGCAATACCAGATGGAGGGTAGATTCTTTTTGGATGTTGTAGTCTGAGAGGGTGCGGCCA 94477
Query 33215 TCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTT 33274
|| || | |||||||||| ||| |||||||| || ||||| | ||| ||||| || ||
Sbjct 94476 TCTTCAAGTTGCTTTCCAGCAAAGATTAAACGCTGTTGGTCTGGGGGAATGCCCTCCTTG 94417
Query 33275 TC---GCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTT 33331
|| | | | |||| | || | | ||| ||||| | | ||| |||| |||
Sbjct 94416 TCTTGGATTTTAGCCT---TGACGTTCTCAATGGTGTCCGATGCCTCAACCTCCAAAGTG 94360
Query 33332 ATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369
|| ||||| ||||| || || || || |||||||||||
Sbjct 94359 ATTGTTTTGCCCGTCAGGGTCTTGACAAAAATTTGCAT 94322
Score = 86.0 bits (94), Expect = 4e-12
Identities = 156/223 (70%), Gaps = 14/223 (6%)
Strand=Plus/Minus
Query 33155 CGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGT-TG 33213
||||| ||||| || | || || ||||| || |||||||||||||| | | || |
Sbjct 95676 CGCAATACCAAGTGAAGAGTGGATTCTTTCTGGATATTGTAATCAGAAA----GGGTACG 95621
Query 33214 GTCATC--CAA-TTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTC 33270
| |||| ||| ||| |||||| || || ||||| || ||||| | || || |||||
Sbjct 95620 GCCATCTTCAAGTTGTTTTCCAGCGAAGATCAAACGCTGTTGGTCTGGCGGGATTCCTTC 95561
Query 33271 TTT---TTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAG 33327
||| || | | | ||| || || ||| ||| ||||| | || ||| || ||
Sbjct 95560 TTTGTCTTGGATCTTGGCC---TTCACATTTTCAATAGTGTCCGAAGCTTCAACTTCAAG 95504
Query 33328 AGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCATG 33370
||| || || ||||| ||||| || || || ||||| ||||||
Sbjct 95503 AGTGATTGTCTTTCCAGTAAGGGTCTTGACAAAAATCTGCATG 95461
Score = 84.2 bits (92), Expect = 1e-11
Identities = 158/231 (68%), Gaps = 6/231 (3%)
Strand=Plus/Minus
Query 33142 ACCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGA 33201
||| |||| | ||||| ||||| || | || || || ||||| || || ||||||||
Sbjct 95233 ACCACCTCGGAGACGCAATACCAAGTGAAGGGTGGATTCCTTTTGAATGTTATAATCAGA 95174
Query 33202 CAAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGG 33261
| || | || || | |||||| ||| ||| || ||||| || ||||| | |||
Sbjct 95173 AAGGGTGCGGCCATCTTCAAGTTGCTTCCCAGCAAAGATCAAACGCTGTTGGTCTGGGGG 95114
Query 33262 TATGCCTTCTTTTTCGCTAATC---GCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTG 33318
||||| || || || ||| |||| | || ||| ||| || || | |
Sbjct 95113 AATGCCCTCCTTGTCTTGTATCTTAGCCT---TCACATTTTCAATGGTATCTGAAGCCTC 95057
Query 33319 AACGTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369
|| || |||||||| ||||| || ||||| || || ||||||||||||||
Sbjct 95056 GACTTCAAGAGTTATAGTTTTGCCAGTAAGGGTCTTGACGAAAATTTGCAT 95006
Score = 84.2 bits (92), Expect = 1e-11
Identities = 158/231 (68%), Gaps = 6/231 (3%)
Strand=Plus/Minus
Query 33142 ACCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGA 33201
||| |||| | ||||| ||||| || | || || || || || ||||||||||||||
Sbjct 95917 ACCTCCTCGGAGACGCAATACCAAGTGAAGAGTGGATTCCTTCTGGATATTGTAATCAGA 95858
Query 33202 CAAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGG 33261
| || | ||| || | ||||| || ||| || ||||| || ||||| | |||
Sbjct 95857 AAGGGTGCGACCGTCTTCTAGCTGCTTCCCGGCAAAGATCAAACGCTGTTGGTCTGGGGG 95798
Query 33262 TATGCCTTCTTT---TTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTG 33318
||||| || || || | | | ||| || || ||| ||| || || | |
Sbjct 95797 AATGCCCTCCTTGTCTTGGATCTTAGCC---TTCACATTTTCAATGGTATCTGAAGCCTC 95741
Query 33319 AACGTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369
|| || |||||||| ||||| || ||||| || || ||||||||||||||
Sbjct 95740 GACTTCAAGAGTTATAGTTTTGCCAGTAAGGGTCTTGACGAAAATTTGCAT 95690
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 318677360483298
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