Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Operophtera_20brumata_20[genbank_20GCA_5F001266575.1_202015-08-11] 25,801 sequences; 638,207,720 total letters Query= NC_005038.1 Length=99657 Score E Sequences producing significant alignments: (Bits) Value seq4530 98.7 6e-16 seq3754 95.1 8e-15 seq3664 89.7 3e-13 >seq4530 Length=43051 Score = 98.7 bits (108), Expect = 6e-16 Identities = 161/231 (70%), Gaps = 6/231 (3%) Strand=Plus/Plus Query 33142 ACCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGA 33201 ||| |||| | ||||| || ||||| | ||||||||||| || || ||||| || || Sbjct 12321 ACCACCTCGAAGGCGCAATACTAAATGAAGCGTCGACTCTTTCTGAATGTTGTAGTCGGA 12380 Query 33202 CAAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGG 33261 || || || ||| |||| ||||||||| || || | ||| |||||||| | ||| Sbjct 12381 CAGTGTGCGTCCGTCTTCCAGTTGCTTTCCGGCGAAGATAAGACGCTGCTGGTCTGGGGG 12440 Query 33262 TATGCCTTCTTTTTC---GCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTG 33318 |||||||| || || | | | || ||| || | | |||||| ||| | || Sbjct 12441 GATGCCTTCCTTGTCCTGGATTTTAGC---TTTAACATTCTCAATCGTATCGGAAGCTTC 12497 Query 33319 AACGTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369 ||| || || || || || || || || | ||| |||||||| || ||||| Sbjct 12498 AACCTCAAGTGTAATGGTCTTGCCAGTCAAAGTCTTTACGAAGATCTGCAT 12548 Score = 93.3 bits (102), Expect = 3e-14 Identities = 152/218 (70%), Gaps = 6/218 (3%) Strand=Plus/Plus Query 33155 CGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGG 33214 |||| |||||| || | || || ||||| || || ||||| ||||| | | || || Sbjct 12106 CGCAGCACCAAGTGAAGGGTTGATTCTTTCTGAATGTTGTAGTCAGATAGAGTGCGTCCA 12165 Query 33215 TCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTT 33274 || || | ||||| ||| || || | | |||||||| | || || |||||||| Sbjct 12166 TCTTCTAGCTGCTTGCCAGCGAAAATAAGTCTCTGCTGGTCTGGAGGAATACCTTCTTTA 12225 Query 33275 TC---GCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTT 33331 || | | | || |||||| | | ||| ||||| || | ||| |||| |||| Sbjct 12226 TCCTGGATTTTGGC---TTTTACGTTCTCAATAGTGTCAGAGGCCTCAACTTCCAAAGTT 12282 Query 33332 ATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369 || ||||| || || |||||||| |||||||||||||| Sbjct 12283 ATAGTTTTGCCAGTTAGAGTTTTAACGAAAATTTGCAT 12320 Score = 93.3 bits (102), Expect = 3e-14 Identities = 152/218 (70%), Gaps = 6/218 (3%) Strand=Plus/Plus Query 33155 CGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGG 33214 ||||| || || || | ||||||||||| || || ||||| || |||| || || | Sbjct 13019 CGCAATACTAAGTGAAGGGTCGACTCTTTCTGAATGTTGTAGTCCGACAGTGTGCGTCCG 13078 Query 33215 TCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTT 33274 || |||| ||||||||| || || | ||| |||||||| | ||| |||||||| || Sbjct 13079 TCTTCCAGTTGCTTTCCGGCGAAGATAAGACGCTGCTGGTCTGGGGGGATGCCTTCCTTG 13138 Query 33275 TC---GCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTT 33331 || | | | || ||| || | | |||||| ||| | || ||| || || || Sbjct 13139 TCCTGGATTTTAGC---TTTAACATTCTCAATCGTATCGGAAGCTTCAACCTCAAGTGTA 13195 Query 33332 ATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369 || || || || || | ||| |||||||| || ||||| Sbjct 13196 ATGGTCTTGCCAGTCAAAGTCTTTACGAAGATCTGCAT 13233 Score = 87.8 bits (96), Expect = 1e-12 Identities = 151/218 (69%), Gaps = 5/218 (2%) Strand=Plus/Plus Query 33155 CGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGG 33214 ||||| || ||||| | ||||||||||| || || ||||| || |||| || || | Sbjct 12562 CGCAATACTAAATGAAGGGTCGACTCTTTCTGAATGTTGTAGTCCGACAGTGTGCGTCCG 12621 Query 33215 TCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTT 33274 || |||| ||||||||| || || | ||| |||||||| | ||| |||||||| || Sbjct 12622 TCTTCCAGTTGCTTTCCGGCGAAGATAAGACGCTGCTGGTCTGGGGGGATGCCTTCCTTG 12681 Query 33275 TC---GCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTT 33331 || | | | ||| ||| || | | ||| || ||| | || ||| || || || Sbjct 12682 TCCTGGATTTTGGCC--TTTAACATTCTCAATGGTATCGGAAGCTTCAACCTCAAGTGTG 12739 Query 33332 ATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369 || || || || || | || || ||||| || ||||| Sbjct 12740 ATGGTCTTGCCAGTCAAGGTCTTAACGAAGATCTGCAT 12777 >seq3754 Length=50117 Score = 95.1 bits (104), Expect = 8e-15 Identities = 165/235 (70%), Gaps = 14/235 (6%) Strand=Plus/Minus Query 33142 ACCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGA 33201 |||||||| | ||||| ||||| || | || || ||||| || |||||||||||||| Sbjct 315 ACCGCCTCGGAGACGCAATACCAAGTGAAGAGTGGATTCTTTCTGGATATTGTAATCAGA 256 Query 33202 CAAATTGAGTT-GGTCATC--CAA-TTGCTTTCCACTAAATATTAAACGTTGCTGGTCCG 33257 | | || || |||| ||| ||| |||||| || || || || || ||||| | Sbjct 255 AA----GGGTACGGCCATCTTCAAGTTGTTTTCCAGCGAAGATCAATCGCTGTTGGTCTG 200 Query 33258 TGGGTATGCCTTCTTTTTCGCTAATC---GCCTGTTTTACTGTTTGAATCGTGTCGTTGG 33314 ||| || |||||||| || ||| |||| | || ||| ||| ||||| | Sbjct 199 GGGGGATTCCTTCTTTGTCTTGGATCTTGGCCT---TCACATTTTCAATAGTGTCCGAAG 143 Query 33315 GTTGAACGTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369 || ||| || ||||| || || ||||| ||||| || || || ||||||||||| Sbjct 142 CTTCAACTTCAAGAGTGATTGTCTTTCCAGTAAGGGTCTTGACAAAAATTTGCAT 88 Score = 89.7 bits (98), Expect = 3e-13 Identities = 156/222 (70%), Gaps = 14/222 (6%) Strand=Plus/Minus Query 33155 CGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTT-G 33213 ||||| ||||| || | || || ||||| || |||||||||||||| | | || | Sbjct 1214 CGCAATACCAAGTGAAGAGTGGATTCTTTCTGGATATTGTAATCAGAAA----GGGTACG 1159 Query 33214 GTCATC--CAA-TTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTC 33270 | |||| ||| ||| |||||| || || || || || ||||| | ||| || ||||| Sbjct 1158 GCCATCTTCAAGTTGTTTTCCAGCGAAGATCAATCGCTGTTGGTCTGGGGGGATTCCTTC 1099 Query 33271 TTTTTCGCTAATC---GCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAG 33327 ||| || ||| |||| | || ||| ||| ||||| | || ||| || || Sbjct 1098 TTTGTCTTGGATCTTGGCCT---TCACATTTTCAATAGTGTCCGAAGCTTCAACTTCAAG 1042 Query 33328 AGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369 ||| || || ||||| ||||| || || || ||||||||||| Sbjct 1041 AGTGATTGTCTTTCCAGTAAGGGTCTTGACAAAAATTTGCAT 1000 Score = 84.2 bits (92), Expect = 1e-11 Identities = 158/231 (68%), Gaps = 6/231 (3%) Strand=Plus/Minus Query 33142 ACCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGA 33201 ||| |||| | ||||| ||||| || | || || || || || |||||||||||||| Sbjct 1455 ACCTCCTCGGAGACGCAATACCAAGTGAAGAGTGGATTCCTTCTGGATATTGTAATCAGA 1396 Query 33202 CAAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGG 33261 | || | ||| || | ||||| || ||| || ||||| || ||||| | ||| Sbjct 1395 AAGGGTGCGACCGTCTTCTAGCTGCTTCCCGGCAAAGATCAAACGCTGTTGGTCTGGGGG 1336 Query 33262 TATGCCTTCTTT---TTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTG 33318 ||||| || || || | | | ||| || || ||| ||| || || | | Sbjct 1335 AATGCCCTCCTTGTCTTGGATCTTAGCC---TTCACATTTTCAATGGTATCTGAAGCCTC 1279 Query 33319 AACGTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369 || || |||||||| ||||| || ||||| || || |||||||||||||| Sbjct 1278 GACTTCAAGAGTTATAGTTTTGCCAGTAAGGGTCTTGACGAAAATTTGCAT 1228 >seq3664 Length=101255 Score = 89.7 bits (98), Expect = 3e-13 Identities = 164/235 (70%), Gaps = 14/235 (6%) Strand=Plus/Minus Query 33142 ACCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGA 33201 |||||||| | ||||| ||||| || | || || ||||| || |||||||||||||| Sbjct 94777 ACCGCCTCGGAGACGCAATACCAAGTGAAGAGTGGATTCTTTCTGGATATTGTAATCAGA 94718 Query 33202 CAAATTGAGT-TGGTCATC--CAA-TTGCTTTCCACTAAATATTAAACGTTGCTGGTCCG 33257 | | || || |||| ||| ||| |||||| || || || || || ||||| | Sbjct 94717 AA----GGGTACGGCCATCTTCAAGTTGTTTTCCAGCGAAGATCAATCGCTGTTGGTCTG 94662 Query 33258 TGGGTATGCCTTCTTT---TTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGG 33314 ||| || |||||||| || | | | ||| || || ||| ||| ||||| | Sbjct 94661 GGGGGATTCCTTCTTTGTCTTGGATCTTGGCC---TTCACATTTTCAATAGTGTCCGAAG 94605 Query 33315 GTTGAACGTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369 || ||| || ||||| || || ||||| ||||| || || || ||||| ||||| Sbjct 94604 CTTCAACTTCAAGAGTGATTGTCTTTCCAGTAAGGGTCTTGACAAAAATCTGCAT 94550 Score = 87.8 bits (96), Expect = 1e-12 Identities = 151/218 (69%), Gaps = 6/218 (3%) Strand=Plus/Minus Query 33155 CGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGG 33214 ||||| |||| ||| | || || |||||||| || ||||| || || | || | Sbjct 94536 CGCAATACCAGATGGAGGGTAGATTCTTTTTGGATGTTGTAGTCTGAGAGGGTGCGGCCA 94477 Query 33215 TCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTT 33274 || || | |||||||||| ||| |||||||| || ||||| | ||| ||||| || || Sbjct 94476 TCTTCAAGTTGCTTTCCAGCAAAGATTAAACGCTGTTGGTCTGGGGGAATGCCCTCCTTG 94417 Query 33275 TC---GCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTT 33331 || | | | |||| | || | | ||| ||||| | | ||| |||| ||| Sbjct 94416 TCTTGGATTTTAGCCT---TGACGTTCTCAATGGTGTCCGATGCCTCAACCTCCAAAGTG 94360 Query 33332 ATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369 || ||||| ||||| || || || || ||||||||||| Sbjct 94359 ATTGTTTTGCCCGTCAGGGTCTTGACAAAAATTTGCAT 94322 Score = 86.0 bits (94), Expect = 4e-12 Identities = 156/223 (70%), Gaps = 14/223 (6%) Strand=Plus/Minus Query 33155 CGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGT-TG 33213 ||||| ||||| || | || || ||||| || |||||||||||||| | | || | Sbjct 95676 CGCAATACCAAGTGAAGAGTGGATTCTTTCTGGATATTGTAATCAGAAA----GGGTACG 95621 Query 33214 GTCATC--CAA-TTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTC 33270 | |||| ||| ||| |||||| || || ||||| || ||||| | || || ||||| Sbjct 95620 GCCATCTTCAAGTTGTTTTCCAGCGAAGATCAAACGCTGTTGGTCTGGCGGGATTCCTTC 95561 Query 33271 TTT---TTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAG 33327 ||| || | | | ||| || || ||| ||| ||||| | || ||| || || Sbjct 95560 TTTGTCTTGGATCTTGGCC---TTCACATTTTCAATAGTGTCCGAAGCTTCAACTTCAAG 95504 Query 33328 AGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCATG 33370 ||| || || ||||| ||||| || || || ||||| |||||| Sbjct 95503 AGTGATTGTCTTTCCAGTAAGGGTCTTGACAAAAATCTGCATG 95461 Score = 84.2 bits (92), Expect = 1e-11 Identities = 158/231 (68%), Gaps = 6/231 (3%) Strand=Plus/Minus Query 33142 ACCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGA 33201 ||| |||| | ||||| ||||| || | || || || ||||| || || |||||||| Sbjct 95233 ACCACCTCGGAGACGCAATACCAAGTGAAGGGTGGATTCCTTTTGAATGTTATAATCAGA 95174 Query 33202 CAAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGG 33261 | || | || || | |||||| ||| ||| || ||||| || ||||| | ||| Sbjct 95173 AAGGGTGCGGCCATCTTCAAGTTGCTTCCCAGCAAAGATCAAACGCTGTTGGTCTGGGGG 95114 Query 33262 TATGCCTTCTTTTTCGCTAATC---GCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTG 33318 ||||| || || || ||| |||| | || ||| ||| || || | | Sbjct 95113 AATGCCCTCCTTGTCTTGTATCTTAGCCT---TCACATTTTCAATGGTATCTGAAGCCTC 95057 Query 33319 AACGTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369 || || |||||||| ||||| || ||||| || || |||||||||||||| Sbjct 95056 GACTTCAAGAGTTATAGTTTTGCCAGTAAGGGTCTTGACGAAAATTTGCAT 95006 Score = 84.2 bits (92), Expect = 1e-11 Identities = 158/231 (68%), Gaps = 6/231 (3%) Strand=Plus/Minus Query 33142 ACCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGA 33201 ||| |||| | ||||| ||||| || | || || || || || |||||||||||||| Sbjct 95917 ACCTCCTCGGAGACGCAATACCAAGTGAAGAGTGGATTCCTTCTGGATATTGTAATCAGA 95858 Query 33202 CAAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGG 33261 | || | ||| || | ||||| || ||| || ||||| || ||||| | ||| Sbjct 95857 AAGGGTGCGACCGTCTTCTAGCTGCTTCCCGGCAAAGATCAAACGCTGTTGGTCTGGGGG 95798 Query 33262 TATGCCTTCTTT---TTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTG 33318 ||||| || || || | | | ||| || || ||| ||| || || | | Sbjct 95797 AATGCCCTCCTTGTCTTGGATCTTAGCC---TTCACATTTTCAATGGTATCTGAAGCCTC 95741 Query 33319 AACGTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369 || || |||||||| ||||| || ||||| || || |||||||||||||| Sbjct 95740 GACTTCAAGAGTTATAGTTTTGCCAGTAAGGGTCTTGACGAAAATTTGCAT 95690 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 318677360483298