Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Operophtera_20brumata_20[genbank_20GCA_5F001266575.1_202015-08-11] 25,801 sequences; 638,207,720 total letters Query= NC_005068.1 Length=110907 Score E Sequences producing significant alignments: (Bits) Value seq3664 87.8 1e-12 >seq3664 Length=101255 Score = 87.8 bits (96), Expect = 1e-12 Identities = 167/245 (68%), Gaps = 1/245 (0%) Strand=Plus/Minus Query 43894 ACCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTT 43953 |||||||| | | || ||||| || || ||| ||||| || ||||| ||||| Sbjct 93865 ACCTCCTCGGAGACGCAATACCAAGTGAAGAGTGGATTCTTTCTGGATATTGTAATCAGA 93806 Query 43954 TAATTGACGCTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGG 44013 | ||| |||| || | ||| ||||| || || ||||| || || ||||| | || Sbjct 93805 GAGGGTGCGCCCATCTTCAAGTTGCTTTCCAGCGAAGATCAAACGCTGTTGGTCTGGTGG 93746 Query 44014 TACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCAC 44073 | || || || ||| ||||| ||||| | ||| || || | || ||| || Sbjct 93745 AATGCCCTCCTTGTCTTGTATTTTCGCCTTGACGTTCTCAATGGTGTCCGACGCCTCGAC 93686 Query 44074 ATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCATGTCGAGTCTTTG 44133 || | || |||||||| || || | |||||||||||||| |||||| |||| | || Sbjct 93685 CTCCAAAGTGATTGTTTTGCCCGTCAGGGTCTTCACAAATATCTGCATGGCGAG-ATCTG 93627 Query 44134 TAACA 44138 ||||| Sbjct 93626 TAACA 93622 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 354666040294548