Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Operophtera_20brumata_20[genbank_20GCA_5F001266575.1_202015-08-11] 25,801 sequences; 638,207,720 total letters Query= NC_005137.2 Length=131160 Score E Sequences producing significant alignments: (Bits) Value seq754 228 7e-55 >seq754 Length=177731 Score = 228 bits (252), Expect = 7e-55 Identities = 635/963 (66%), Gaps = 17/963 (2%) Strand=Plus/Plus Query 101018 TAATCGACAACGCCGTCTTCCCAAGTACCGGTCACGGGCCCGGCAGCTGTGCCTGTGAAA 101077 || || || || || || | |||||| || | || || || | ||| | || ||||| Sbjct 50642 TAGTCAACGACTCCATCCTGCCAAGTGCCTTTGACAGGTCCTGTAGCGTTCCCAGTGAAG 50701 Query 101078 TAGTTGTCACCGTCATAGCCTGCCACGCCTGTCCAACCGCGGCCGTACATGGCAACGCCC 101137 ||| | || |||||| | || || ||||| || ||||||||||| ||||| || Sbjct 50702 GGGTTCTTGCCTTCATAGTCGTGAACTCCAGTCCATCCTCGGCCGTACATAGCAACACCT 50761 Query 101138 ACAATAATTTTGCGCGGGTCTACGCCCTGGTTCGTG-AGCGATTTAACAGCGTAATCCGT 101196 || | ||| || |||| || || || || | || |||| || | |||| || Sbjct 50762 ACGACAATCTTCTTGGGGTTAACACCTTGAG-CGAGCAGGAATTTCACTCCAAAATCAGT 50820 Query 101197 GTTGTACAGCTCGTTTGGGTTCCAACTCGGCGCGTAGAGTGTAGTTTGATAGCCCAG--- 101253 | |||| ||| || || |||| || ||||| || | || || | || || Sbjct 50821 GGTGTAAGTCTCCTTGGGCATCCACGCAGGAGCGTACAGAGATGTCTGGTGTCCGAGGGT 50880 Query 101254 ATCGATGTTTGACCACGCGCCTTTGAAATCGTAGCTCATGAGAAATATTTTATCGAGGAA 101313 ||| || ||||| || ||||| || ||||||||||| || || || | || | | | Sbjct 50881 ATCA---TTAGACCAGGCTCCTTTAAAGTCGTAGCTCATCAGGAAGATATGGTCCATGTA 50937 Query 101314 CTTTTGCGCAAGATCGTATTTTACTACAGCAATTTTGTCGTGACCCGAACTAATTGCACT 101373 ||| || ||| ||| | || || || ||||| ||| | ||| || || Sbjct 50938 CTTCTGGGCAGCGCTGTAGTCGACCACTTGGATCTTGTCCCAACCGGCACTGATGGCGGA 50997 Query 101374 TGTTAATTCGTATGTTTTGCCCGTTTGCAGTTGCAA-CTCGTCCAGCATTGCGCGCAATT 101432 || | |||||| | || || |||| ||| | | ||| | ||||| | || | || Sbjct 50998 AGTCAGCTCGTATTTCTTACCAGTTT-CAGCGGATAGCTCATTGAGCATGTCACGTATTT 51056 Query 101433 CTTTCAGTAAAATGTTGTACGT-GTCAGCGTCGCGTTCTTTGTTGCCGAGTGTTGGGTTG 101491 | |||| | ||| |||| | || | || || | || || |||||| Sbjct 51057 CCTTCATGA----GTTCAACGTAGACATGGCCGTCCTCAGGGCCTCCAAGGTCAGGGTTG 51112 Query 101492 GCGCCTTTACCACCCGGAAACTCCCAATCGATGTCTACCCCGTCAAAAAATTTCCAAACC 101551 || ||||| || || || |||||||||||||| || || || || || ||||||||| Sbjct 51113 GCACCTTTGCCTCCAGGGAACTCCCAATCGATATCAACACCATCGAAGAATTTCCAAGTT 51172 Query 101552 TGCAAAAATTCTTTGACAGAATCCAC-AAACACACGCCGTTTTATCGCGTCGTGCATATA 101610 |||| || ||||| || || | || |||| | | || || ||| | | | Sbjct 51173 TGCAGGAAGTCTTTCACCGATGCGACGAAACGGTC-TCTCTTGGTCTTGTCATTTAAGAA 51231 Query 101611 ATAGAACGGGTCGGACAATGTCCAGCCGCCGATGGACGGCAAAATTTTAAGGTGTGGATT 101670 | |||| || || | || |||||||| |||||||| || | ||||| |||| || || Sbjct 51232 AAAGAATGGATCAGCCAGGGTCCAGCCACCGATGGATGGGAGGATTTTCAGGTCAGGTTT 51291 Query 101671 GGCCAATTTGGCCGCCATTAGCTGACCAAAGTTGCCTTTGTAGGGCTCGTTCCAAGCAGA 101730 || ||| | ||| ||||| || || ||||||||||| || |||||||||| ||| Sbjct 51292 CGCTTGTTTCAACATCATGAGCTGGCCGAAATTGCCTTTGTAAGGTTCGTTCCAAGAAGA 51351 Query 101731 TACACCTTTCTGCGGTTTTTGTATTGCGGCCCAAGGATCGTGGATAGCAACTTTAAAATC 101790 | ||||||||| ||||| || | || ||||| ||||| ||||| | ||||| || || Sbjct 51352 CAGACCTTTCTGGGGTTTCTGCAAGGCTGCCCATGGATCATGGATTGTCACTTTGAAGTC 51411 Query 101791 TGAACGGCCCTGGCAAGAACGTTGCAACGCTTCAAAACTACCGGGTATGGTTTTGAGGGC 101850 ||||| ||| |||||||||| |||| ||||| || || || | Sbjct 51412 CTCTCGGCCGCTGCAGGAACGTTGCAGAGCTTGGAAACTGCCTTCGATCTCCTTCAAACT 51471 Query 101851 GTCGTTAAGGCCATCGCCGCCACAAATGGGTATGAACCCGTACAACAAATGTGAGAGGTT 101910 |||||||| |||||| || || ||||| || ||||| ||||||| | ||| | ||| || Sbjct 51472 GTCGTTAATGCCATCACCTCCGCAAATTGGGATGAAACCGTACAGGAGATGCGTGAGATT 51531 Query 101911 GGGCAGCGGCACTTTGTCCACCGGAAAGTTGCGACCATACACGCCCCATTCTACAAAATA 101970 || | || | |||||| ||||| || | |||||||||||||| || || || Sbjct 51532 TGGTACTGGGATACGGTCCACTGGAAACTTTCTGGGGTACACGCCCCATTCGACGAAGTA 51591 Query 101971 CGC 101973 || Sbjct 51592 AGC 51594 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419455260936081