Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Operophtera_20brumata_20[genbank_20GCA_5F001266575.1_202015-08-11] 25,801 sequences; 638,207,720 total letters Query= NC_005906.1 Length=81755 Score E Sequences producing significant alignments: (Bits) Value seq3111 127 1e-24 seq8525 122 5e-23 seq718 122 5e-23 seq233 122 5e-23 seq1526 118 6e-22 seq44 118 6e-22 seq4203 116 2e-21 seq1392 116 2e-21 seq264 116 2e-21 seq11119 113 2e-20 seq3718 113 2e-20 >seq3111 Length=57791 Score = 127 bits (140), Expect = 1e-24 Identities = 81/89 (91%), Gaps = 0/89 (0%) Strand=Plus/Plus Query 11442 ATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACG 11501 ||||||| | || ||||||||||| |||||||||| |||||||||||||||||||||| Sbjct 24023 ATAAAAATTAAATTTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACG 24082 Query 11502 ACGCTCTRACCAACTGAGCTAATGGGCCG 11530 ||||||| ||||||||||||||||||||| Sbjct 24083 ACGCTCTAACCAACTGAGCTAATGGGCCG 24111 >seq8525 Length=20193 Score = 122 bits (134), Expect = 5e-23 Identities = 78/86 (91%), Gaps = 0/86 (0%) Strand=Plus/Plus Query 11445 AAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACG 11504 |||||| | ||||||||||| |||||||||| ||||||||||||||||||||||||| Sbjct 6759 AAAAATACATTTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGACG 6818 Query 11505 CTCTRACCAACTGAGCTAATGGGCCG 11530 |||| ||||||||||||||||||||| Sbjct 6819 CTCTAACCAACTGAGCTAATGGGCCG 6844 >seq718 Length=118126 Score = 122 bits (134), Expect = 5e-23 Identities = 78/86 (91%), Gaps = 0/86 (0%) Strand=Plus/Minus Query 11445 AAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACG 11504 ||||| || ||||||||||| |||||||||| ||||||||||||||||||||||||| Sbjct 27444 AAAAAGCATGTTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGACG 27385 Query 11505 CTCTRACCAACTGAGCTAATGGGCCG 11530 |||| ||||||||||||||||||||| Sbjct 27384 CTCTAACCAACTGAGCTAATGGGCCG 27359 >seq233 Length=229678 Score = 122 bits (134), Expect = 5e-23 Identities = 81/90 (90%), Gaps = 2/90 (2%) Strand=Plus/Plus Query 11441 AATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCAC 11500 ||| ||||| || ||||||||||| |||||||||| ||||||||||||||||||||| Sbjct 128865 AATCAAAAAACA--TTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCAC 128922 Query 11501 GACGCTCTRACCAACTGAGCTAATGGGCCG 11530 |||||||| ||||||||||||||||||||| Sbjct 128923 GACGCTCTAACCAACTGAGCTAATGGGCCG 128952 >seq1526 Length=86435 Score = 118 bits (130), Expect = 6e-22 Identities = 73/79 (92%), Gaps = 0/79 (0%) Strand=Plus/Minus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 |||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 23062 TGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 23003 Query 11516 TGAGCTAATGGGCCGTCGA 11534 ||||||||||||||| ||| Sbjct 23002 TGAGCTAATGGGCCGGCGA 22984 >seq44 Length=341226 Score = 118 bits (130), Expect = 6e-22 Identities = 88/105 (84%), Gaps = 9/105 (9%) Strand=Plus/Plus Query 11435 AGAATTAATAAAAAATCAAAT---------TGGCCCATGAAAGGATCGAACCTTCGACCT 11485 ||||| ||||||||| |||| |||||||||| |||||||||| |||||| Sbjct 147897 AGAATAAATAAAAAACCAAAAAAGATGAACTGGCCCATGAGGGGATCGAACCCGCGACCT 147956 Query 11486 TCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCCG 11530 ||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 147957 TCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTAATGGGCCG 148001 >seq4203 Length=72132 Score = 116 bits (128), Expect = 2e-21 Identities = 77/86 (90%), Gaps = 0/86 (0%) Strand=Plus/Plus Query 11445 AAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACG 11504 ||||| || |||||||||| |||||||||| ||||||||||||||||||||||||| Sbjct 43886 AAAAAGTAACGTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGACG 43945 Query 11505 CTCTRACCAACTGAGCTAATGGGCCG 11530 |||| ||||||||||||||||||||| Sbjct 43946 CTCTAACCAACTGAGCTAATGGGCCG 43971 >seq1392 Length=91739 Score = 116 bits (128), Expect = 2e-21 Identities = 72/78 (92%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 |||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 1038 TGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 979 Query 11516 TGAGCTAATGGGCCGTCG 11533 ||||||||||||||| || Sbjct 978 TGAGCTAATGGGCCGGCG 961 >seq264 Length=168675 Score = 116 bits (128), Expect = 2e-21 Identities = 71/76 (93%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 11455 TTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAA 11514 ||||||||||| |||||||||| ||||||||||||||||||||||||||||| ||||| Sbjct 68946 TTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAA 69005 Query 11515 CTGAGCTAATGGGCCG 11530 |||||||||||||||| Sbjct 69006 CTGAGCTAATGGGCCG 69021 >seq11119 Length=11621 Score = 113 bits (124), Expect = 2e-20 Identities = 69/74 (93%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 |||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 150 TGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 209 Query 11516 TGAGCTAATGGGCC 11529 |||||||||||||| Sbjct 210 TGAGCTAATGGGCC 223 >seq3718 Length=50822 Score = 113 bits (124), Expect = 2e-20 Identities = 69/74 (93%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 |||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 42491 TGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 42550 Query 11516 TGAGCTAATGGGCC 11529 |||||||||||||| Sbjct 42551 TGAGCTAATGGGCC 42564 Lambda K H 0.638 0.410 0.920 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 261408974173876