Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Operophtera_20brumata_20[genbank_20GCA_5F001266575.1_202015-08-11] 25,801 sequences; 638,207,720 total letters Query= NC_006647.1 Length=8785 Score E Sequences producing significant alignments: (Bits) Value seq3901 197 8e-47 seq7012 194 9e-46 seq2748 194 9e-46 seq75 190 1e-44 seq3554 185 5e-43 seq8942 156 2e-34 seq9514 140 2e-29 seq4458 138 6e-29 seq710 114 7e-22 seq337 113 3e-21 seq3210 109 3e-20 seq1104 105 4e-19 seq9965 100 2e-17 seq7464 93.3 2e-15 seq157 93.3 2e-15 seq41 93.3 2e-15 seq103 89.7 3e-14 >seq3901 Length=45253 Score = 197 bits (218), Expect = 8e-47 Identities = 143/169 (85%), Gaps = 21/169 (12%) Strand=Plus/Plus Query 8355 aaaaaaaaaTTAGAAAAATGATTCACT-------------CTGCAACTTCCCGCTAATTC 8401 |||||||||||||||||| | ||||| |||||||||||||||||||| Sbjct 12147 AAAAAAAAATTAGAAAAACGGTTCACCTTAATGGCCATCCCTGCAACTTCCCGCTAATTC 12206 Query 8402 CATTCCTGGGCGCTTAAAATTGTACTTATGACATTTTTGAGTTTTTAAGCTCAAAATATA 8461 ||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 12207 CATTCCTGGGCGCTTAAAATTGTACTTATGACATTTTTG--------AGCTCAAAATATA 12258 Query 8462 ATTTATGTGTTATTTTGAGCTCGCTGAGTTCTAAGAAATAATATTTCTA 8510 ||||||||| ||||||||||||||||||||| ||||||||||||||||| Sbjct 12259 ATTTATGTGATATTTTGAGCTCGCTGAGTTCAAAGAAATAATATTTCTA 12307 >seq7012 Length=26895 Score = 194 bits (214), Expect = 9e-46 Identities = 143/169 (85%), Gaps = 21/169 (12%) Strand=Plus/Minus Query 8355 aaaaaaaaaTTAGAAAAATGATTCAC-----------TC--TGCAACTTCCCGCTAATTC 8401 |||||||||||||||||| | ||||| || ||||||||| ||||||||| Sbjct 20588 AAAAAAAAATTAGAAAAACGGTTCACCTTAAAGGCCATCCTTGCAACTTCTCGCTAATTC 20529 Query 8402 CATTCCTGGGCGCTTAAAATTGTACTTATGACATTTTTGAGTTTTTAAGCTCAAAATATA 8461 ||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 20528 CATTCCTGGGCGCTTAAAATTGTACTTATGACATTTTTGAG--------CTCAAAATATA 20477 Query 8462 ATTTATGTGTTATTTTGAGCTCGCTGAGTTCTAAGAAATAATATTTCTA 8510 ||||||||| ||||||||||||||||||||| ||||||||||||||||| Sbjct 20476 ATTTATGTGATATTTTGAGCTCGCTGAGTTCAAAGAAATAATATTTCTA 20428 >seq2748 Length=62016 Score = 194 bits (214), Expect = 9e-46 Identities = 142/169 (84%), Gaps = 21/169 (12%) Strand=Plus/Minus Query 8355 aaaaaaaaaTTAGAAAAATGATTCACT-------------CTGCAACTTCCCGCTAATTC 8401 |||||||||||||||||| | ||||| |||||||||||||||||||| Sbjct 27278 AAAAAAAAATTAGAAAAACGGTTCACCTTAAAGGCCATCCCTGCAACTTCCCGCTAATTC 27219 Query 8402 CATTCCTGGGCGCTTAAAATTGTACTTATGACATTTTTGAGTTTTTAAGCTCAAAATATA 8461 ||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 27218 CATTCCTGGGCGCTTAAAATTGTACTTATGACATTTTTG--------AGCTCAAAATATA 27167 Query 8462 ATTTATGTGTTATTTTGAGCTCGCTGAGTTCTAAGAAATAATATTTCTA 8510 ||||||||| ||||||||||||||||||||| ||||| ||||||||||| Sbjct 27166 ATTTATGTGATATTTTGAGCTCGCTGAGTTCAAAGAACTAATATTTCTA 27118 >seq75 Length=298925 Score = 190 bits (210), Expect = 1e-44 Identities = 142/170 (84%), Gaps = 21/170 (12%) Strand=Plus/Plus Query 8354 GaaaaaaaaaTTAGAAAAATGATTCACT-------------CTGCAACTTCCCGCTAATT 8400 |||||||||| |||||||| | ||||| ||||||||||||||||||| Sbjct 261363 GAAAAAAAAAATAGAAAAACGGTTCACCTTAAAGGCCATCCCTGCAACTTCCCGCTAATT 261422 Query 8401 CCATTCCTGGGCGCTTAAAATTGTACTTATGACATTTTTGAGTTTTTAAGCTCAAAATAT 8460 |||||||||||||||||||||||||||| ||||||||||||| |||||||||| Sbjct 261423 CCATTCCTGGGCGCTTAAAATTGTACTTGTGACATTTTTGAG--------CTCAAAATAT 261474 Query 8461 AATTTATGTGTTATTTTGAGCTCGCTGAGTTCTAAGAAATAATATTTCTA 8510 |||||||||| ||||||||||||||||||||| ||||||||||||||||| Sbjct 261475 AATTTATGTGATATTTTGAGCTCGCTGAGTTCAAAGAAATAATATTTCTA 261524 >seq3554 Length=52339 Score = 185 bits (204), Expect = 5e-43 Identities = 117/128 (91%), Gaps = 8/128 (6%) Strand=Plus/Minus Query 8383 TGCAACTTCCCGCTAATTCCATTCCTGGGCGCTTAAAATTGTACTTATGACATTTTTGAG 8442 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 161 TGCAACTTCTCGCTAATTCCATTCCTGGGCGCTTAAAATTGTACTTATGACATTTTTGAG 102 Query 8443 TTTTTAAGCTCAAAATATAATTTATGTGTTATTTTGAGCTCGCTGAGTTCTAAGAAATAA 8502 |||||||||||||||||||| ||||||||||||||||||||| ||||||||| Sbjct 101 --------CTCAAAATATAATTTATGTGATATTTTGAGCTCGCTGAGTTCAAAGAAATAA 50 Query 8503 TATTTCTA 8510 |||||||| Sbjct 49 TATTTCTA 42 >seq8942 Length=39774 Score = 156 bits (172), Expect = 2e-34 Identities = 133/169 (79%), Gaps = 30/169 (18%) Strand=Plus/Minus Query 8355 aaaaaaaaaTTAGAAAAATGATTCACT-------------CTGCAACTTCCCGCTAATTC 8401 |||||||||||||||||| | ||||| |||||||||||||||||||| Sbjct 3789 AAAAAAAAATTAGAAAAACGGTTCACCTTAAAGGCCATCCCTGCAACTTCCCGCTAATTC 3730 Query 8402 CATTCCTGGGCGCTTAAAATTGTACTTATGACATTTTTGAGTTTTTAAGCTCAAAATATA 8461 | ||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 3729 CTTTCCTGGGCGCTTAAAATTGTACTTATGACATTTTTG--------AGCTCAAAATATA 3678 Query 8462 ATTTATGTGTTATTTTGAGCTCGCTGAGTTCTAAGAAATAATATTTCTA 8510 ||||||||| ||||| ||||||| ||||||||||||||||| Sbjct 3677 ATTTATGTGATATTT---------TGAGTTCAAAGAAATAATATTTCTA 3638 >seq9514 Length=16118 Score = 140 bits (154), Expect = 2e-29 Identities = 121/149 (81%), Gaps = 1/149 (1%) Strand=Plus/Plus Query 1049 GACAACATCGCGGGGGTAGTCAGGGAAGCTTCCTATGACCTTAAAACGTCGAGATCTGAT 1108 |||| ||||| | ||||||| ||||||||||| ||||| ||||||| ||||||| || Sbjct 14323 GACACCATCGTGAAAATAGTCAGAGAAGCTTCCTAGGACCTCAAAACGTTGAGATCTAAT 14382 Query 1109 GAAAACTCGATTTTTGCAAAACGGGGTGAAAACAATAACTTCCCGATTTTTGAAAATCTT 1168 || ||||||||||| |||||||||| ||| |||||||||||| |||||| | || Sbjct 14383 GAGAACTCGATTTTCAGAAAACGGGGTAAAACCAATAACTTCCCTATTTTT-TTTTTGTT 14441 Query 1169 CAATTTTCTTAGCGGGAAGTTAAAAATTT 1197 | |||| |||||||||||||||||| || Sbjct 14442 TATTTTTTTTAGCGGGAAGTTAAAAAATT 14470 >seq4458 Length=75444 Score = 138 bits (152), Expect = 6e-29 Identities = 110/136 (81%), Gaps = 21/136 (15%) Strand=Plus/Plus Query 8355 aaaaaaaaaTTAGAAAAATGATTCACT-------------CTGCAACTTCCCGCTAATTC 8401 |||||||||||||||||| | ||||| ||||||||| |||||||||| Sbjct 18303 AAAAAAAAATTAGAAAAACGGTTCACCTTAAAGGCCATCCCTGCAACTTTCCGCTAATTC 18362 Query 8402 CATTCCTGGGCGCTTAAAATTGTACTTATGACATTTTTGAGTTTTTAAGCTCAAAATATA 8461 ||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 18363 CATTCCTGGGCGCTTAAAATTGTACTTATGACATTTTTG--------AGCTCAAAATATA 18414 Query 8462 ATTTATGTGTTATTTT 8477 ||||||||| |||||| Sbjct 18415 ATTTATGTGATATTTT 18430 >seq710 Length=120614 Score = 114 bits (126), Expect = 7e-22 Identities = 83/99 (84%), Gaps = 13/99 (13%) Strand=Plus/Plus Query 8355 aaaaaaaaaTTAGAAAAATGATTCACT-------------CTGCAACTTCCCGCTAATTC 8401 |||||||||||||||||| | ||||| |||||||||||||||||||| Sbjct 7322 AAAAAAAAATTAGAAAAACGGTTCACCTTAAAGGCCATCCCTGCAACTTCCCGCTAATTC 7381 Query 8402 CATTCCTGGGCGCTTAAAATTGTACTTATGACATTTTTG 8440 ||||||||||||||||||||||||||||||||||||||| Sbjct 7382 CATTCCTGGGCGCTTAAAATTGTACTTATGACATTTTTG 7420 >seq337 Length=155088 Score = 113 bits (124), Expect = 3e-21 Identities = 87/106 (82%), Gaps = 13/106 (12%) Strand=Plus/Plus Query 8348 GATGTGGaaaaaaaaaTTAGAAAAATGATTCACT-------------CTGCAACTTCCCG 8394 ||| || ||||||||||||||||| | ||||| ||||||||||||| Sbjct 66023 GATCTGACAAAAAAAATTAGAAAAACGGTTCACCTTAAAGGCCATCCCTGCAACTTCCCG 66082 Query 8395 CTAATTCCATTCCTGGGCGCTTAAAATTGTACTTATGACATTTTTG 8440 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 66083 CTAATTCCATTCCTGGGCGCTTAAAATTGTACTTATGACATTTTTG 66128 >seq3210 Length=69891 Score = 109 bits (120), Expect = 3e-20 Identities = 82/99 (83%), Gaps = 13/99 (13%) Strand=Plus/Minus Query 8355 aaaaaaaaaTTAGAAAAATGATTCA-------------CTCTGCAACTTCCCGCTAATTC 8401 |||||||||||||||||| | |||| | |||||||||||||||||||| Sbjct 52491 AAAAAAAAATTAGAAAAACGGTTCATCTTAAAGGCCATCCCTGCAACTTCCCGCTAATTC 52432 Query 8402 CATTCCTGGGCGCTTAAAATTGTACTTATGACATTTTTG 8440 ||||||||||| ||||||||||||||||||||||||||| Sbjct 52431 CATTCCTGGGCACTTAAAATTGTACTTATGACATTTTTG 52393 >seq1104 Length=101114 Score = 105 bits (116), Expect = 4e-19 Identities = 81/99 (82%), Gaps = 13/99 (13%) Strand=Plus/Minus Query 8355 aaaaaaaaaTTAGAAAAATGATTCACT-------------CTGCAACTTCCCGCTAATTC 8401 |||||||| ||||||||| | ||||| ||||||||||| |||||||| Sbjct 6526 AAAAAAAATTTAGAAAAACGGTTCACCTTAAAGGCCATCCCTGCAACTTCCTGCTAATTC 6467 Query 8402 CATTCCTGGGCGCTTAAAATTGTACTTATGACATTTTTG 8440 ||||||||||||||||||||||||||||||||||||||| Sbjct 6466 CATTCCTGGGCGCTTAAAATTGTACTTATGACATTTTTG 6428 >seq9965 Length=14786 Score = 100 bits (110), Expect = 2e-17 Identities = 80/99 (81%), Gaps = 13/99 (13%) Strand=Plus/Plus Query 8355 aaaaaaaaaTTAGAAAAATGATTCACT-------------CTGCAACTTCCCGCTAATTC 8401 ||||||| |||||||||| | ||||| |||||||||| ||||||||| Sbjct 2704 AAAAAAATATTAGAAAAACGGTTCACCTTAAAGGCCATCCCTGCAACTTCACGCTAATTC 2763 Query 8402 CATTCCTGGGCGCTTAAAATTGTACTTATGACATTTTTG 8440 ||| ||||||||||||||||||||||||||||||||||| Sbjct 2764 CATACCTGGGCGCTTAAAATTGTACTTATGACATTTTTG 2802 >seq7464 Length=24777 Score = 93.3 bits (102), Expect = 2e-15 Identities = 56/59 (95%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 8382 CTGCAACTTCCCGCTAATTCCATTCCTGGGCGCTTAAAATTGTACTTATGACATTTTTG 8440 |||||||||||| |||||||||||||| |||||||||||||||||||||||||||||| Sbjct 10816 CTGCAACTTCCCACTAATTCCATTCCTAAGCGCTTAAAATTGTACTTATGACATTTTTG 10758 >seq157 Length=189916 Score = 93.3 bits (102), Expect = 2e-15 Identities = 56/59 (95%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 8382 CTGCAACTTCCCGCTAATTCCATTCCTGGGCGCTTAAAATTGTACTTATGACATTTTTG 8440 |||||||||||| |||||||||||||| |||||||||||||||||||||||||||||| Sbjct 137915 CTGCAACTTCCCACTAATTCCATTCCTAAGCGCTTAAAATTGTACTTATGACATTTTTG 137857 >seq41 Length=250769 Score = 93.3 bits (102), Expect = 2e-15 Identities = 71/87 (82%), Gaps = 13/87 (15%) Strand=Plus/Plus Query 8355 aaaaaaaaaTTAGAAAAATGATTCACT-------------CTGCAACTTCCCGCTAATTC 8401 |||||||||||||||||| | ||||| |||||||||||||||||||| Sbjct 192987 AAAAAAAAATTAGAAAAACGGTTCACCTTAAAGGCCATCCCTGCAACTTCCCGCTAATTC 193046 Query 8402 CATTCCTGGGCGCTTAAAATTGTACTT 8428 ||||||||||||||||||||||||||| Sbjct 193047 CATTCCTGGGCGCTTAAAATTGTACTT 193073 >seq103 Length=222326 Score = 89.7 bits (98), Expect = 3e-14 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 8382 CTGCAACTTCCCGCTAATTCCATTCCTGGGCGCTTAAAATTGTACTTATGACATTTTTG 8440 ||||||||||||||||||||||||||||||||||||||||| |||||| | ||||||| Sbjct 184701 CTGCAACTTCCCGCTAATTCCATTCCTGGGCGCTTAAAATTAAACTTATTAAATTTTTG 184759 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 27988673613836