Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Operophtera_20brumata_20[genbank_20GCA_5F001266575.1_202015-08-11]
25,801 sequences; 638,207,720 total letters
Query= NC_006998.1
Length=194711
Score E
Sequences producing significant alignments: (Bits) Value
seq955 284 2e-71
seq4 113 6e-20
seq137 87.8 2e-12
>seq955
Length=106330
Score = 284 bits (314), Expect = 2e-71
Identities = 1131/1764 (64%), Gaps = 26/1764 (1%)
Strand=Plus/Minus
Query 61995 GTGAATTGAATGG-GAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAG 62053
|||||||| || | | || | || |||||||| | || || ||||| || ||||| |
Sbjct 60339 GTGAATTGGATCGCGTTCGCA-GCCGGTTTCGTCCTCAGGTAATACATGCCAGTTTTCAA 60281
Query 62054 ACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTAT 62113
||| | ||||| ||| ||| || || |||| ||| ||| | || || || |
Sbjct 60280 ACCCATTTTCCATGCGTGAAAGTGAATTGATGTTAATTTACCATAGTTGGGTTCAGCCAC 60221
Query 62114 ATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTAT 62173
||| || || | || || || || || || || || || | || || ||||| | ||
Sbjct 60220 ATGAATGTTGAATGACTGGCTCTGGTCTATAAAAGCCCCTCGATCAGCTGCCATCTGAAT 60161
Query 62174 GATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCTTCTGGAA 62232
| ||||||| || ||| ||||| | || || || || || |||| | |||| ||||
Sbjct 60160 GCTCGTCTTGACTGAAATCTCCCAGACTGTCTTGTACAATTCTCTTATT-TCTTTGGGAA 60102
Query 62233 G-GTTTG--TATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCATCAT 62289
| || |||| || | |||||| | || || || || || || ||||
Sbjct 60101 TAGCTTCAATATTTTGGACAGATCCATTGTTGTGAATGATTAGGTTTTTCATATCTTCAT 60042
Query 62290 TCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTC 62349
||| || | |||||| | | ||| || ||||| | || || || || || || |
Sbjct 60041 CCCACAAGTCCGCCTCGGTCAGATCTCGCAGCAGATGATGGTTCACGACCTGGAACTCGC 59982
Query 62350 CAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGACTCATTATTTC 62409
| |||| || || || ||| || ||| ||| | || || | ||||| ||||| |
Sbjct 59981 CCGACAGGACCCTGCGCTGGTAGATGTTAGACGTAAAAGGCTCGAAGGACTCGTTATTGC 59922
Query 62410 CCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGAC 62469
| | ||||| || || || || || ||||| ||||| | || | |||| ||||
Sbjct 59921 CGAGGATTTGTGCGGTGGAGGCGGTGGGCATCGGTGCTAATAAGAGCGAGTTTCGGAGAC 59862
Query 62470 CGTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGGTACAACNN 62529
| | | | |||||| ||||| |||| |||| | ||| || || | ||
Sbjct 59861 CATGTTTAGCGATTTTTTCTTTGAGAGCACCCCAGTCCCATAGGTCTGTGGGCGTTTTGT 59802
Query 62530 NNNNNNNNNNNNNTTGTAGAATACCGTTACTGGC-GTACGATCCTACATATGTATCGTAT 62588
||| | || || | || | | || | || || || || ||
Sbjct 59801 TCCACATGTCGTATTGCAAGATGCCCTGGCTCACCGGAC-AGCCCGGGTAAGTTTCATAA 59743
Query 62589 GGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCG 62648
|| |||||||| || || || || || ||||| ||||| || ||||||||||||
Sbjct 59742 ACGCCAATTTTCTCAGCGAGCTCGCAGCTTGCTTCTAACGCACCATAGTAAATGGTTTCG 59683
Query 62649 AAGATCTTCTTATTTAGATCTTG--TGCTTCCAGGCTATCAAATGGATAATTTAAGAGAA 62706
|| |||| | ||| | |||| ||| | || ||| | || | | || |
Sbjct 59682 AAAATCTGTTGATTCAA--CTTGATTGCAGCTTCACTTTCATACGGGATACGCATCAGGA 59625
Query 62707 TAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAGA 62766
|| || || || |||||||||||||| || ||||| || | ||| | | | || |||
Sbjct 59624 CGAAAGCATCGGCCAATCCTTGAACACCGATTCCGATCGGCCGATGCCGCATGTTTGAGT 59565
Query 62767 TTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTG-ACA 62825
| | |||||||| || || || | || | ||||| ||||| || ||||| ||| ||
Sbjct 59564 TCTTGGCTTCTGGGATCGGGTAGAAGTTCACCTCTATGATTTTGTTTAGATT-CTGCACG 59506
Query 62826 ATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAA---TCGCCCATCTATTACAAAC 62882
| | ||| || || || || || ||| | | | | |||| | || ||
Sbjct 59505 ACGATTTTAGTGACTTCTTTTAGCTTCTCAAAGTTATACGTTTTGTCATCATTGACGAAT 59446
Query 62883 ATGTTCAAGGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGT 62942
|||||| || || || |||| |||||| ||||| || |||| | || || |
Sbjct 59445 CTGTTCAGTGCGACGGACGCCAAATTACACACGGCAACTTCATCCGGCGACGTGTACTCA 59386
Query 62943 ATTATCTCAGTGCAAAGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTT 63002
| ||||| ||||| |||||||| || |||||||| || | || | |||||| || ||
Sbjct 59385 ACGATCTCCGTGCAGAGATTACTGCATTTGATAGTGCCCAGGTTCTTTTGATTGCTTTTA 59326
Query 63003 TTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATA 63062
|||| || || || || ||||| ||| |||| || || ||||| | || | ||| ||
Sbjct 59325 CTGTTGCATGCGTCTTTGTAAAGCATGTATGGGGTCCCGGTTTCGACTTGCGCTTCAATG 59266
Query 63063 ATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTATCTCCTTTCTCTT--TCGT 63120
|| || ||||| | ||| | || | | | | | || || |||||||| || |
Sbjct 59265 ATAGCCTTCCACAAAACTTGCGCTCTCACTT--GCCTCACATATCGTTTCTCTTGTTCAT 59208
Query 63121 ATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCAT 63180
|| | ||| || ||||||||||| ||||| | | ||| || ||||| || |
Sbjct 59207 ATCGCTCATATAACTTCTCGAACTCGTCCCCCCAGCAGTCGGCCAGGCCGGGACAGTCGT 59148
Query 63181 CCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAA 63240
|| ||||| | ||| || |||| || |||| |||||| || | || || |
Sbjct 59147 GGGGGCACATGAGGCTCCATTCGCCGTTGCTCTCGACTCTTTTCATGAACAAGTCTGGTA 59088
Query 63241 TCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAA 63300
|||| || | ||| || ||||| | | | |||||| || || || || || || |
Sbjct 59087 TCCAGAGCCCATAAAAAAGCTCTCTTGCGCGAACTTCCTCCTTCCCAGTGTTTTTCTTGA 59028
Query 63301 GATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAG 63360
|||| | |||| | | ||||| | |||||||| || | ||| | || | | || |
Sbjct 59027 GATCCAAGAACTCAAATATATCCGCGTGCCACGGCTCGAGGTAGACCGCGAAGGCGCCGG 58968
Query 63361 GCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTG 63420
| |||||||| || || || || | ||| ||||| ||||| ||||| || | | ||| |
Sbjct 58967 GTCGTTTGTTCCCGCCTTGGTCGACGTACCTAGCTGTGTTGTTATAGACGCGGAGCATGG 58908
Query 63421 GAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAAT-- 63478
| | | ||||| || | || ||||| |||| ||| ||| ||| |||| || ||
Sbjct 58907 GTACGAGGCCGTTGGAGACGCCGTTGGTTCCGGCGATGTAGGATCCCTTGGCGCGGATGC 58848
Query 63479 ATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAA 63538
| | || ||| | || || || || || ||| ||||| | ||||| |||| |
Sbjct 58847 AGT-GTACGTGA-ACGCCGATACCGCCCGCTGATTTGGAGATGAGCGCGCAATGTTTGAG 58790
Query 63539 CGTGTCATAGATACCCTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACAT 63598
|||||| ||||| ||||| ||||| || || ||||| | || || ||| || |
Sbjct 58789 CGTGTCGTAGATGCCCTCGATGCTGTCGTCCTTCATGGCGATGAGGAAGCAGGAGGAGAG 58730
Query 63599 TTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTC 63658
||| | || || |||| || | || || |||||||| || | || ||
Sbjct 58729 CTGGGGGCGGGGCGTGGCCGCCGAGAACAGCGTGGGGCTCGCGTGCGTGAAGTACTTCTC 58670
Query 63659 AGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGC 63718
|| || || |||||||| | ||||| ||||| || ||| ||||| || | |
Sbjct 58669 TGACAGCAGGTTGTACGTGTTGATAGCGGAGTCGATGTCCTCGCCGTGAATGCCGATGGA 58610
Query 63719 GACACGCATTAACATGTGCTGAGG 63742
|| ||||| | ||||||||| ||
Sbjct 58609 AACTCGCATCAGCATGTGCTGGGG 58586
Score = 96.9 bits (106), Expect = 4e-15
Identities = 115/156 (74%), Gaps = 0/156 (0%)
Strand=Plus/Minus
Query 63964 GtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGGCATAAT 64023
||||||| || |||||||| | || |||| ||| | |||||| ||||||||||| || |
Sbjct 55892 GTTTTTTAGTCTCCTTGTGCAAGTTGGATATGGCGAGTCTGGCTGCTAGAATGGCGTAGT 55833
Query 64024 CCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCG 64083
||||||| | || || || || ||| | || || |||| | ||||||||||| |
Sbjct 55832 CCGGATGGTTGGTGGTCATCGTAGCCGCTGTCTCCGCAGCCAAGTTATCCAATTCTACGG 55773
Query 64084 TTGTTACTCCATTATATATTCCTTGAATAACCTTCA 64119
| || |||||| |||||| || || |||||||
Sbjct 55772 TGGTGACTCCAGAATATATGCCGCTGATTACCTTCA 55737
>seq4
Length=362500
Score = 113 bits (124), Expect = 6e-20
Identities = 255/383 (67%), Gaps = 3/383 (1%)
Strand=Plus/Minus
Query 156549 ATTTCTGTTATGACTCCAATTAATCCCATGTTAGCGGAATCGTGTGATTCTGTCAATAAG 156608
|| ||| ||||||| ||| || || ||||| || ||| | || | || || | | |
Sbjct 26029 ATATCTCTTATGACACCAGTTCTACCGATGTTGGCTGAAGCCTGCAAATCCGTTGAAATG 25970
Query 156609 GCGTTTAAAAAATTTCCATCAGGAATGTTTGCGGAAGTCAAATACGATGGTGAAAGAGTA 156668
|| | ||||||| |||| |||||||| ||||| ||||||| ||||||||| | ||
Sbjct 25969 GCAATGAAAAAATGTCCAAATGGAATGTTCTCGGAAATCAAATATGATGGTGAACGTGTG 25910
Query 156669 CAAGTTCATAAAAATAATAACGAGTTTGCCTTCTTTAGTAGAAACATGAAACCAGTACTC 156728
|||||||||||||| | ||||||| | || || | |||||||| |
Sbjct 25909 CAAGTTCATAAAAAGGGGAGCGAGTTTAAATATTTCTCCCGAGCTTTAAAACCAGTTATG 25850
Query 156729 TCTCATAAAGTGGATTATCTCAAAGAATACATACCGAAAGCATTTAAAAAAGCTACGTCT 156788
| |||||||| | || | || || | | |||| |||| ||| |||| | | |
Sbjct 25849 CCGCATAAAGTTAGTCATTTTAAGGATTTCTTACCTCAAGCGTTTCCTAAAGGTGTGGAT 25790
Query 156789 ATCGTATTGGATTCTGAAATTGTTCTTGTAGACGAACATAATG---TACCGCTCCCGTTT 156845
|| | |||||| |||| || | | || || | ||| | ||| || ||||||
Sbjct 25789 ATGATTTTGGATGCTGAGGTTTTAATGGTTGATGTGAATACGGGGAAACCACTACCGTTT 25730
Query 156846 GGAAGTTTAGGAATACACAAAAAGAAAGAATATAAAAACTCTAACATGTGTTTGTTCGTG 156905
|| | ||||| || ||||| ||| |||| |||| || | | ||| ||| |||
Sbjct 25729 GGTACATTAGGTATTCACAAGAAGTCCGAATTTAAAGGAGCTCAAGTATGTCTGTATGTG 25670
Query 156906 TTTGACTGTTTGTACTTTGATGG 156928
|||||||| ||||| | | ||||
Sbjct 25669 TTTGACTGCTTGTATTATAATGG 25647
>seq137
Length=194913
Score = 87.8 bits (96), Expect = 2e-12
Identities = 123/173 (71%), Gaps = 0/173 (0%)
Strand=Plus/Plus
Query 33574 TAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAAT 33633
||||||||||| | ||| ||||| || || || | || || || || ||||| |||
Sbjct 27394 TAAGTATCGATGAGCAGAGAGTACATCTCTGAGTGTACATTCTCCATTGCAATCTGGAAT 27453
Query 33634 CCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCCGCCAAATTT 33693
|| ||||| ||||| || || || | ||| |||||| | | |||| ||| |||| ||
Sbjct 27454 CCATAGAAGCATCTTGCTTCAGTGACCTGCACTTCTTGAGAGAATCTCTCCACCAAGTTC 27513
Query 33694 TCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAA 33746
||||| || || || || ||| || || || |||| || ||||| || ||
Sbjct 27514 TCATTGACAATGCCATCGGAGGCCGCGAAGAAAGCCAGGACGTGTTTGATGAA 27566
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 622746291741160
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