Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Operophtera_20brumata_20[genbank_20GCA_5F001266575.1_202015-08-11] 25,801 sequences; 638,207,720 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq955 123 6e-23 >seq955 Length=106330 Score = 123 bits (136), Expect = 6e-23 Identities = 448/691 (65%), Gaps = 10/691 (1%) Strand=Plus/Plus Query 363622 ATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCC 363681 ||||||||||| ||||||||| |||| ||||| || || |||| || || || ||| Sbjct 58754 ATGAAGGACGACAGCATCGAGGGCATCTACGACACGCTCAAACATTGCGCGCTCATCTCC 58813 Query 363682 AAGAATGCAGGCGGAATTGGTGTATCGATCCACAATG--TTCGTGCACAGAACAGTTACA 363739 || || ||||| || || || || | ||| || | || || || |||| Sbjct 58814 AAATCAGCGGGCGGTATCGGCGT-TC-ACGTACACTGCATCCGCGCCAAGGGATCCTACA 58871 Query 363740 TTCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATA 363799 | ||| || || ||| || || || || |||||||| || || | | |||| | Sbjct 58872 TCGCCGGAACCAACGGCGTCTCCAACGGCCTCGTACCCATGCTCCGCGTCTATAACAACA 58931 Query 363800 CTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCG 363859 | || |||||||||||||| || || || || || || || || | || |||| Sbjct 58932 CAGCTAGGTACGTCGACCAAGGCGGGAACAAACGACCCGGCGCCTTCGCGGTCTACCTCG 58991 Query 363860 AGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGG 363919 |||| || || ||||| |||||||| | || ||| ||||||||| || || |||| Sbjct 58992 AGCCGTGGCACGCGGATATATTTGAGTTCTTGGATCTCAAGAAAAACACTGGGAAGGAGG 59051 Query 363920 AATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCG 363979 || | || ||| | || || || |||| || ||| | | ||| || ||||| | | Sbjct 59052 AAGTTCGCGCAAGAGAGCTTTTTTATGGGCTCTGGATACCAGACTTGTTCATGAAAAGAG 59111 Query 363980 TGGAG-GCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGAT 364038 | ||| ||| ||| ||| ||| | ||||| ||||| ||||| || || |||| Sbjct 59112 TCGAGAGCAACGGCGAA-TGGAGCCTCATGTGCCCCCACGACTGTCCCGGCCTGGCCGAC 59170 Query 364039 GTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCT-CG 364097 ||||| ||||| | | |||| || |||||| || |||| | | | Sbjct 59171 TGCTGGGGGGACGAGTTCGAGAAGTTATATGAGCGATATGAA--CAAGAGAAACGATATG 59228 Query 364098 TAAGACAA-TTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAG 364156 | || ||| | || || | ||| || ||||| || |||| | || || | Sbjct 59229 TGAGGCAAGTGAGAGCGCAAGTTTTGTGGAAGGCTATCATTGAAGCGCAAGTCGAAACCG 59288 Query 364157 GAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTG 364216 | || || || ||| | |||||||| | |||||| | || ||| || || |||| | Sbjct 59289 GGACCCCATACATGCTTTACAAAGACGCATGCAACAGTAAAAGCAATCAAAAGAACCTGG 59348 Query 364217 GTACAATTCAGCAGAGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGA 364276 | || || | || || || || || ||||| |||| ||||| | || || || Sbjct 59349 GCACTATCAAATGCAGTAATCTCTGCACGGAGATCGTTGAGTACACGTCGCCGGATGAAG 59408 Query 364277 CTGCCGTATGTAACCTTGCGTCGATCGCGCT 364307 |||||| ||||| | ||||| |||| || Sbjct 59409 TTGCCGTGTGTAATTTGGCGTCCGTCGCACT 59439 Score = 111 bits (122), Expect = 4e-19 Identities = 251/371 (68%), Gaps = 6/371 (2%) Strand=Plus/Plus Query 364720 AAGCATGGTACTCGCAACTCCCTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAG 364779 || |||||| || ||||| ||| | ||| || |||||||| || || || ||||| Sbjct 59855 AAACATGGTCTCCGAAACTCGCTCTTATTAGCACCGATGCCCACCGCCTCCACCGCACAA 59914 Query 364780 ATCCTCGGAAACAACGAGTGCTTCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTT 364839 |||||||| || ||||||| |||||| || ||||| || | || ||| |||| Sbjct 59915 ATCCTCGGCAATAACGAGTCCTTCGAGCCTTTTACGTCTAACATCTACCAGCGCAGGGTC 59974 Query 364840 CTTTCCGGAGAATTTCCGGTAGTTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGG 364899 || || || || || | ||| || || | | || | ||||| |||| |||| Sbjct 59975 CTGTCGGGCGAGTTCCAGGTCGTGAACCATCATCTGCTGCGAGATCTGACCGAG-GCGGA 60033 Query 364900 CT-GTGGGGTGACAGCATGAAGAACTATATCATCGCCGCTAATGGTTCTGTGCAGAACAT 364958 || ||||| ||| ||||| ||| ||||| | ||||| ||||| || || || Sbjct 60034 CTTGTGGGATGAAGATATGAAAAACCTAATCATTCACAACAATGGATCTGTCCAAAATAT 60093 Query 364959 TCCAGGATTTCCAGAAGATCTGAAGCCTATT-TACAAAACCGTATGGGAAATTTCCATGC 365017 | || |||| |||| | ||| ||| ||||| || || ||||| ||||| | Sbjct 60094 TGAAGCTATTCCCAAAGAAAT-AAGAGAATTGTACAAGACAGTCTGGGAGATTTCAGTCA 60152 Query 365018 GAACTCTCATTGATATGGCGGCCGATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTA 365077 || |||| | ||||| || ||||| || |||||||| ||||||||||| || | Sbjct 60153 AGACGAGCATTCAGATGGCAGCTGATCGAGGGGCTTTTATAGACCAGAGCCAGTCATTCA 60212 Query 365078 ACGTATTCATG 365088 || ||||||| Sbjct 60213 AC--ATTCATG 60221 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1302922743476382