Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Operophtera_20brumata_20[genbank_20GCA_5F001266575.1_202015-08-11] 25,801 sequences; 638,207,720 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq754 228 7e-55 seq4530 105 6e-18 >seq754 Length=177731 Score = 228 bits (252), Expect = 7e-55 Identities = 528/789 (67%), Gaps = 15/789 (2%) Strand=Plus/Minus Query 32177 GCGTATTTTGTAGAATGGGGCGTGTACGGGCGCAATTTCCCAATAGACAAAGTGCCGTTG 32236 || || || || ||||||||||||||| | || || ||| | ||| | || | Sbjct 51594 GCTTACTTCGTCGAATGGGGCGTGTACCCCAGAAAGTTTCCAGTGGACCGTATCCCAGTA 51535 Query 32237 CCCAATTTGTCGCATCTGTTGTACGGATTTATTCCTATTTGCGGCGGCGACGGACTAAAC 32296 || ||| | ||||||| ||||||| || || || |||||||| || || || | ||| Sbjct 51534 CCAAATCTCACGCATCTCCTGTACGGTTTCATCCCAATTTGCGGAGGTGATGGCATTAAC 51475 Query 32297 GATGCCCTCAAAACGATACCG--GGCAGTTTTGAGGCGCTGCAACGTTCGTGCAAAGGCC 32354 || | | || || | || |||||||| | || ||||||||||| |||| |||| Sbjct 51474 GA--CAGTTTGAAGGAGATCGAAGGCAGTTTCCAAGCTCTGCAACGTTCCTGCAGCGGCC 51417 Query 32355 GCGCAGACTTTAAGGTTGCCATTCACGACCCTTGGGCCGCAATACAAAAACCGCAGAAGG 32414 | | ||||| || || | || || || || ||||| || | || ||||| ||||| | Sbjct 51416 GAGAGGACTTCAAAGTGACAATCCATGATCCATGGGCAGCCTTGCAGAAACCCCAGAAAG 51357 Query 32415 GCGTGTCTGCGTGGAACGAACCCTACAAAGGCAACTTTGGCCAATTGATGGCGGCCAAGT 32474 | ||||| | ||||||||||| ||||||||||| || ||||| | ||| | || Sbjct 51356 GTCTGTCTTCTTGGAACGAACCTTACAAAGGCAATTTCGGCCAGCTCATGATGTTGAAAC 51297 Query 32475 TGGCAAACCCTCACATAAAAATTTTACCATCTATTGGCGGGTGGACGTTGTCGGATCCCT 32534 || || ||| || | ||||| | ||||| || || || ||||| || | ||||| | Sbjct 51296 AAGCGAAACCTGACCTGAAAATCCTCCCATCCATCGGTGGCTGGACCCTGGCTGATCCAT 51237 Query 32535 TTTATTTTATGCACGACGCGGAAAAACGGCACGTGTTTGTCGATTCCGTCAAAGAGTTTT 32594 | | ||| | | ||| | || | || || |||| || || ||||| || Sbjct 51236 TCTTTTTCTTAAATGACAAGACCAAGAGAGACCGTTTCGTCGCATCGGTGAAAGACTTCC 51177 Query 32595 TACAGGTTTGGAAATTCTTTGACGGAGTGGACATTGATTGGGAGTTCCCGGGCGGCAAAG 32654 | || |||||||||||| || || || || || |||||||||||||| || ||||||| Sbjct 51176 TGCAAACTTGGAAATTCTTCGATGGTGTTGATATCGATTGGGAGTTCCCTGGAGGCAAAG 51117 Query 32655 GTGCCAACCCGGCGCTCGGTAACGGGGAGCGCGACGCGCACACGTACATTATTTTGTTAC 32714 |||||||||| | || || | ||| |||| || ||| || | | Sbjct 51116 GTGCCAACCCTGACCTTGGAGGCCCTGAG---GACGGCCATGTCTACGTTGAACTCATGA 51060 Query 32715 AAGAATTGCGTTCTATGCTGGACGACCT-TCAATTGCAAACGGGCAAAACGTACGAGTTG 32773 | ||| | ||| ||||| | || || || || |||| || || | |||||| || Sbjct 51059 AGGAAATACGTGACATGCTCAATGAGCTATCCGCTG-AAACTGGTAAGAAATACGAGCTG 51001 Query 32774 ACTAGCGCAATTAGTGCCGGCCACGACAAAATTGCTGTGGTGCAATATGAAGCCGCGCAA 32833 ||| ||| || |||||||| ||||| || ||||| | || || || || Sbjct 51000 ACTTCCGCCATCAGTGCCGGTTGGGACAAGATCCAAGTGGTCGACTACAGCGCTGCCCAG 50941 Query 32834 AAGTACCTCGATAAAATATTTCTCATGAGTTACGACTTTAAAGGGGCATGGTCTA---AC 32890 |||||| | || | || || || ||||| |||||||||||||| || ||||||| | Sbjct 50940 AAGTACATGGACCATATCTTCCTGATGAGCTACGACTTTAAAGGAGCCTGGTCTAATGAT 50881 Query 32891 ACCGATTTGGGCTATCAGACCACTTTGTACGCTCCAAGTTGGAATCCCGATGAATTGTAC 32950 ||| | || | ||||| || |||||||||| |||| ||| | || ||| Sbjct 50880 ACC---CTCGGACACCAGACATCTCTGTACGCTCCTGCGTGGATGCCCAAGGAGACTTAC 50824 Query 32951 ACCACAGAT 32959 ||||| ||| Sbjct 50823 ACCACTGAT 50815 >seq4530 Length=43051 Score = 105 bits (116), Expect = 6e-18 Identities = 173/248 (70%), Gaps = 1/248 (0%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||||| || ||||| ||||| || || || || ||||| || |||| ||| | | Sbjct 11864 ATGCAGATCTTTGTAAAAACACTGACTGGCAAGACCATCACACTCGAGGTTGAGGCTTCC 11805 Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405 ||||| | | | || || |||||| || || |||||| ||||| || ||| Sbjct 11804 GACACAATCGAGAATGTTAAGGCAAAAATCCAAGACAAGGAAGGCATCCCCCCCGACCAG 11745 Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465 || | || || | || ||||| ||| | ||||||| | || || | || || ||| Sbjct 11744 CAGCGTCTCATCTTCGCTGGCAAGCAACTTGAAGATGGCCGCACACTGTCAGACTACAAC 11685 Query 115466 ATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGGAAAACCA-CAATA 115524 |||||||| ||||| ||| ||||| | ||| | |||||| |||| |||| || | |||| Sbjct 11684 ATTCAAAAGGAGTCAACTCTACATCTTGTGCTTAGATTGAGAGGTGGAATACAATAAATA 11625 Query 115525 AAAAATTA 115532 |||||||| Sbjct 11624 AAAAATTA 11617 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||||||||||| || ||||| || || || ||||| || || | ||| ||| || Sbjct 12320 ATGCAAATTTTCGTTAAAACTCTAACTGGCAAAACTATAACTTTGGAAGTTGAGGCCTCT 12261 Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405 |||||| ||| | |||||| ||||| ||||||||||| | || || ||| Sbjct 12260 GACACTATTGAGAACGTAAAAGCCAAAATCCAGGATAAAGAAGGTATTCCTCCAGACCAG 12201 Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465 || |||||||||| || ||||| || ||||||||| || | | || || ||| Sbjct 12200 CAGAGACTTATTTTCGCTGGCAAGCAGCTAGAAGATGGACGCACTCTATCTGACTACAAC 12141 Query 115466 ATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 ||||| ||||| || || | || ||||| || | |||| || || Sbjct 12140 ATTCAGAAAGAATCAACCCTTCACTTGGTGCTGCGTCTGCGCGGTGG 12094 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425210250712120