Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Operophtera_20brumata_20[genbank_20GCA_5F001266575.1_202015-08-11]
25,801 sequences; 638,207,720 total letters
Query= NC_007767.1
Length=132959
Score E
Sequences producing significant alignments: (Bits) Value
seq754 228 7e-55
seq4530 105 6e-18
>seq754
Length=177731
Score = 228 bits (252), Expect = 7e-55
Identities = 528/789 (67%), Gaps = 15/789 (2%)
Strand=Plus/Minus
Query 32177 GCGTATTTTGTAGAATGGGGCGTGTACGGGCGCAATTTCCCAATAGACAAAGTGCCGTTG 32236
|| || || || ||||||||||||||| | || || ||| | ||| | || |
Sbjct 51594 GCTTACTTCGTCGAATGGGGCGTGTACCCCAGAAAGTTTCCAGTGGACCGTATCCCAGTA 51535
Query 32237 CCCAATTTGTCGCATCTGTTGTACGGATTTATTCCTATTTGCGGCGGCGACGGACTAAAC 32296
|| ||| | ||||||| ||||||| || || || |||||||| || || || | |||
Sbjct 51534 CCAAATCTCACGCATCTCCTGTACGGTTTCATCCCAATTTGCGGAGGTGATGGCATTAAC 51475
Query 32297 GATGCCCTCAAAACGATACCG--GGCAGTTTTGAGGCGCTGCAACGTTCGTGCAAAGGCC 32354
|| | | || || | || |||||||| | || ||||||||||| |||| ||||
Sbjct 51474 GA--CAGTTTGAAGGAGATCGAAGGCAGTTTCCAAGCTCTGCAACGTTCCTGCAGCGGCC 51417
Query 32355 GCGCAGACTTTAAGGTTGCCATTCACGACCCTTGGGCCGCAATACAAAAACCGCAGAAGG 32414
| | ||||| || || | || || || || ||||| || | || ||||| ||||| |
Sbjct 51416 GAGAGGACTTCAAAGTGACAATCCATGATCCATGGGCAGCCTTGCAGAAACCCCAGAAAG 51357
Query 32415 GCGTGTCTGCGTGGAACGAACCCTACAAAGGCAACTTTGGCCAATTGATGGCGGCCAAGT 32474
| ||||| | ||||||||||| ||||||||||| || ||||| | ||| | ||
Sbjct 51356 GTCTGTCTTCTTGGAACGAACCTTACAAAGGCAATTTCGGCCAGCTCATGATGTTGAAAC 51297
Query 32475 TGGCAAACCCTCACATAAAAATTTTACCATCTATTGGCGGGTGGACGTTGTCGGATCCCT 32534
|| || ||| || | ||||| | ||||| || || || ||||| || | ||||| |
Sbjct 51296 AAGCGAAACCTGACCTGAAAATCCTCCCATCCATCGGTGGCTGGACCCTGGCTGATCCAT 51237
Query 32535 TTTATTTTATGCACGACGCGGAAAAACGGCACGTGTTTGTCGATTCCGTCAAAGAGTTTT 32594
| | ||| | | ||| | || | || || |||| || || ||||| ||
Sbjct 51236 TCTTTTTCTTAAATGACAAGACCAAGAGAGACCGTTTCGTCGCATCGGTGAAAGACTTCC 51177
Query 32595 TACAGGTTTGGAAATTCTTTGACGGAGTGGACATTGATTGGGAGTTCCCGGGCGGCAAAG 32654
| || |||||||||||| || || || || || |||||||||||||| || |||||||
Sbjct 51176 TGCAAACTTGGAAATTCTTCGATGGTGTTGATATCGATTGGGAGTTCCCTGGAGGCAAAG 51117
Query 32655 GTGCCAACCCGGCGCTCGGTAACGGGGAGCGCGACGCGCACACGTACATTATTTTGTTAC 32714
|||||||||| | || || | ||| |||| || ||| || | |
Sbjct 51116 GTGCCAACCCTGACCTTGGAGGCCCTGAG---GACGGCCATGTCTACGTTGAACTCATGA 51060
Query 32715 AAGAATTGCGTTCTATGCTGGACGACCT-TCAATTGCAAACGGGCAAAACGTACGAGTTG 32773
| ||| | ||| ||||| | || || || || |||| || || | |||||| ||
Sbjct 51059 AGGAAATACGTGACATGCTCAATGAGCTATCCGCTG-AAACTGGTAAGAAATACGAGCTG 51001
Query 32774 ACTAGCGCAATTAGTGCCGGCCACGACAAAATTGCTGTGGTGCAATATGAAGCCGCGCAA 32833
||| ||| || |||||||| ||||| || ||||| | || || || ||
Sbjct 51000 ACTTCCGCCATCAGTGCCGGTTGGGACAAGATCCAAGTGGTCGACTACAGCGCTGCCCAG 50941
Query 32834 AAGTACCTCGATAAAATATTTCTCATGAGTTACGACTTTAAAGGGGCATGGTCTA---AC 32890
|||||| | || | || || || ||||| |||||||||||||| || ||||||| |
Sbjct 50940 AAGTACATGGACCATATCTTCCTGATGAGCTACGACTTTAAAGGAGCCTGGTCTAATGAT 50881
Query 32891 ACCGATTTGGGCTATCAGACCACTTTGTACGCTCCAAGTTGGAATCCCGATGAATTGTAC 32950
||| | || | ||||| || |||||||||| |||| ||| | || |||
Sbjct 50880 ACC---CTCGGACACCAGACATCTCTGTACGCTCCTGCGTGGATGCCCAAGGAGACTTAC 50824
Query 32951 ACCACAGAT 32959
||||| |||
Sbjct 50823 ACCACTGAT 50815
>seq4530
Length=43051
Score = 105 bits (116), Expect = 6e-18
Identities = 173/248 (70%), Gaps = 1/248 (0%)
Strand=Plus/Minus
Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345
||||| || ||||| ||||| || || || || ||||| || |||| ||| | |
Sbjct 11864 ATGCAGATCTTTGTAAAAACACTGACTGGCAAGACCATCACACTCGAGGTTGAGGCTTCC 11805
Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405
||||| | | | || || |||||| || || |||||| ||||| || |||
Sbjct 11804 GACACAATCGAGAATGTTAAGGCAAAAATCCAAGACAAGGAAGGCATCCCCCCCGACCAG 11745
Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465
|| | || || | || ||||| ||| | ||||||| | || || | || || |||
Sbjct 11744 CAGCGTCTCATCTTCGCTGGCAAGCAACTTGAAGATGGCCGCACACTGTCAGACTACAAC 11685
Query 115466 ATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGGAAAACCA-CAATA 115524
|||||||| ||||| ||| ||||| | ||| | |||||| |||| |||| || | ||||
Sbjct 11684 ATTCAAAAGGAGTCAACTCTACATCTTGTGCTTAGATTGAGAGGTGGAATACAATAAATA 11625
Query 115525 AAAAATTA 115532
||||||||
Sbjct 11624 AAAAATTA 11617
Score = 89.7 bits (98), Expect = 4e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345
||||||||||| || ||||| || || || ||||| || || | ||| ||| ||
Sbjct 12320 ATGCAAATTTTCGTTAAAACTCTAACTGGCAAAACTATAACTTTGGAAGTTGAGGCCTCT 12261
Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405
|||||| ||| | |||||| ||||| ||||||||||| | || || |||
Sbjct 12260 GACACTATTGAGAACGTAAAAGCCAAAATCCAGGATAAAGAAGGTATTCCTCCAGACCAG 12201
Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465
|| |||||||||| || ||||| || ||||||||| || | | || || |||
Sbjct 12200 CAGAGACTTATTTTCGCTGGCAAGCAGCTAGAAGATGGACGCACTCTATCTGACTACAAC 12141
Query 115466 ATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512
||||| ||||| || || | || ||||| || | |||| || ||
Sbjct 12140 ATTCAGAAAGAATCAACCCTTCACTTGGTGCTGCGTCTGCGCGGTGG 12094
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 425210250712120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |