Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Operophtera_20brumata_20[genbank_20GCA_5F001266575.1_202015-08-11] 25,801 sequences; 638,207,720 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq754 237 1e-57 seq3481 116 3e-21 seq3754 84.2 2e-11 seq3664 84.2 2e-11 seq4530 82.4 6e-11 >seq754 Length=177731 Score = 237 bits (262), Expect = 1e-57 Identities = 785/1200 (65%), Gaps = 53/1200 (4%) Strand=Plus/Plus Query 95832 TTCATGGCATTAAGCAGATCGCCATTGTCAGCGTCTATTTCCCAGGCAAACAAACCTCCT 95891 ||||||||||| | | ||||| ||||| ||||||||||||||||| |||| ||| || Sbjct 50420 TTCATGGCATTCAATATGTCGCCGTTGTCCGCGTCTATTTCCCAGGCGAACAGACCCCCC 50479 Query 95892 AACTTGTTTTGTTCCACATATCGACCTTTAGCTATAACAGAATCAACACTATCATATGAA 95951 | ||| || | | ||||||| || || || || || | || || | Sbjct 50480 AGCTTATTATTTCTCACATATTTCCCCTTGGCAATCGTCGACCTCGCGTCGTCGTACGTG 50539 Query 95952 ATTAAATCGCCTTTGGTTTTATCAAAAACGTAGGCGGCTTTTGCTACGTTGTCAAATTTA 96011 || | ||| || | | | || ||||||| |||| ||| || |||| || Sbjct 50540 ATAAGATCCCCCGTAGCCTCTCTGAACACGTAGGGAGCTTCTGCAACACTGTCGTAT--- 50596 Query 96012 ACAATAT----ATTTGTTT------ATTTCGTTTTTGATTTGGCGATAATCAACAACGCC 96061 | ||| ||||| | |||||||| || | | || ||||| || || Sbjct 50597 -CGATACTCCCATTTGCCTTGAGCGATTTCGTTCGCTATCTCTCTGTAGTCAACGACTCC 50655 Query 96062 ATCTTCCCAAGTGCCCGAAACGGGCCCGTTACTACTTCCCAAAAAATAG-TTATCGTTTT 96120 ||| | ||||||||| || || || || |||||| || | || | | || Sbjct 50656 ATCCTGCCAAGTGCCTTTGACAGGTCCTGTAGCG-TTCCCAGTGAAGGGGTTCTTGCCTT 50714 Query 96121 CGTAATT-TGACACTCCAGTCCAGCCGCGACCGTACATGGCCACGCCCACAATAATTTTG 96179 | || | ||| ||||||||||| || || |||||||| || || || || | ||| || Sbjct 50715 CATAGTCGTGA-ACTCCAGTCCATCCTCGGCCGTACATAGCAACACCTACGACAATCTTC 50773 Query 96180 CGCGGGTCCACGCCTTGATTTGTGAGCA---ATTTAACGGCATGGTCCGTGTTGTACAGC 96236 |||| || |||||| | ||||| |||| || || || ||| |||| | Sbjct 50774 TTGGGGTTAACACCTTGA---GCGAGCAGGAATTTCACTCCAAAATCAGTGGTGTAAGTC 50830 Query 96237 TCGTTTGGGTTCCAACTCGGCGCGTACAGTGTAGTTTGGTATCCCAA---ATCAATGTTT 96293 || || || |||| || |||||||| | || |||| ||| | |||| || Sbjct 50831 TCCTTGGGCATCCACGCAGGAGCGTACAGAGATGTCTGGTGTCCGAGGGTATCA---TTA 50887 Query 96294 GACCACGCGCCTTTAAAATCGTAGCTCATGAGAAATATTTTGTCGAGGAACTTTTGCGCA 96353 ||||| || |||||||| ||||||||||| || || || | ||| | | |||| || ||| Sbjct 50888 GACCAGGCTCCTTTAAAGTCGTAGCTCATCAGGAAGATATGGTCCATGTACTTCTGGGCA 50947 Query 96354 ACGTCGTATTTTACTACAGCAATTTTGTCGTGGCCGGCACTGATTGCACTTGTCAACTCG 96413 || ||| | || || || ||||| ||||||||||| || |||| |||| Sbjct 50948 GCGCTGTAGTCGACCACTTGGATCTTGTCCCAACCGGCACTGATGGCGGAAGTCAGCTCG 51007 Query 96414 TACGTTTTGCCCGTTTGCAGTTGCAA-CTCGTCTAACATCACGCGCAATTCCTTTAATAG 96472 || | || || |||| ||| | | ||| | | ||| | || | |||||| | || Sbjct 51008 TATTTCTTACCAGTTT-CAGCGGATAGCTCATTGAGCATGTCACGTATTTCCTTCATGAG 51066 Query 96473 AATGTTGTACGT-GTCAGCGTCGCGCTCTTTGTTGCCGAGCGTC-GGGTTGGCGCCTTTA 96530 || |||| | || | || ||| | || || ||| |||||||| ||||| Sbjct 51067 ----TTCAACGTAGACATGGCCGTCCTCAGGGCCTCCAAG-GTCAGGGTTGGCACCTTTG 51121 Query 96531 CCGCCCGGAAATTCCCAGTCGATGTCCACTCCGTCGAAAAATTTCCAAACCTGCAAAAAT 96590 || || || || ||||| ||||| || || || ||||| ||||||||| |||| || Sbjct 51122 CCTCCAGGGAACTCCCAATCGATATCAACACCATCGAAGAATTTCCAAGTTTGCAGGAAG 51181 Query 96591 TCTCTGACGGAGTCTACAAACACGCGCCGTTTTTCCGCGTCGTG-CATGTAATA----GA 96645 ||| | || || | || || ||| || | || ||| || ||| ||| | || Sbjct 51182 TCTTTCACCGATGCGACGAA-ACG----GTCTCTCTTGGTCTTGTCATTTAAGAAAAAGA 51236 Query 96646 ACGGGTCGGACAGTGTCCAGCCGCCGATAGACGGCAGAATTTTAAGGTGTGGATTAGCCA 96705 | || || | ||| |||||||| ||||| || || || ||||| |||| || || || Sbjct 51237 ATGGATCAGCCAGGGTCCAGCCACCGATGGATGGGAGGATTTTCAGGTCAGGTTTCGCTT 51296 Query 96706 GTTTGGCCGCCATCAACTGACCAAAGTTGCCTTTGTAGGGCTCGTTCCAAGCAGACACGC 96765 |||| | ||| | ||| || || ||||||||||| || |||||||||| ||||| | Sbjct 51297 GTTTCAACATCATGAGCTGGCCGAAATTGCCTTTGTAAGGTTCGTTCCAAGAAGACAGAC 51356 Query 96766 CCTTTTGCGGTTTTTGTACTGCGGCCCAAGGGTCGTGAATAGCAACTTTAAAATCTGAAC 96825 | || || ||||| || | || ||||| || || || || | ||||| || || | Sbjct 51357 CTTTCTGGGGTTTCTGCAAGGCTGCCCATGGATCATGGATTGTCACTTTGAAGTCCTCTC 51416 Query 96826 GGCCCTGGCAAGAGCGTTGCAGCGCTTCAAAACTACC--GGGTATGGTTTTAAGGGCATC 96883 |||| ||| || |||||||| |||| ||||| || | | | || || | || Sbjct 51417 GGCCGCTGCAGGAACGTTGCAGAGCTTGGAAACTGCCTTCGATCTCCTTCAAACTG--TC 51474 Query 96884 GTTAAGGCCGTCGCCGCCACAAATGGGTATAAACCCGTACAACAAATGTGACAAGTTGGG 96943 ||||| ||| || || || ||||| || || || ||||||| | ||| | | || || Sbjct 51475 GTTAATGCCATCACCTCCGCAAATTGGGATGAAACCGTACAGGAGATGCGTGAGATTTGG 51534 Query 96944 CAGCGGCACTTTGTCCACCGGAAAGTTACGACCATACACGCCCCATTCCACAAAATACGC 97003 | || | |||||| ||||| || | |||||||||||||| || || || || Sbjct 51535 TACTGGGATACGGTCCACTGGAAACTTTCTGGGGTACACGCCCCATTCGACGAAGTAAGC 51594 >seq3481 Length=53562 Score = 116 bits (128), Expect = 3e-21 Identities = 165/232 (71%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 ||||||| |||||| || |||| || || || || ||||| || || ||||| |||| | Sbjct 24278 CCTCCTCTTAGCCTGAGCACCAAGTGAAGAGTAGATTCCTTCTGGATATTGTAATCGGAC 24219 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| | | || |||| |||||||| || | || || ||||| |||||| || Sbjct 24218 AGGGTGCGGCCATCTTCCAGCTGTTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGCGGA 24159 Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888 | ||||| || || ||| | |||||| | | | ||||| || |||| Sbjct 24158 ATACCCTCCTTATCCTGAATCTTGGCCTTCACGTTCTCAATGGTGTCCGAGGCCTCCACC 24099 Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTTGT 16940 || | ||||||||| || ||||| || |||||||| |||||||||||||||| Sbjct 24098 TCAAGGGTGATGGTCTTCCCGGTTAGGGTTTTGACGAAAATCTGCATTTTGT 24047 >seq3754 Length=50117 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/214 (69%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| ||| || ||||| || ||||| |||||||| || | || || ||||| Sbjct 1667 AGAACCAAATGAAGGGTGGATTCTTTTTGGATGTTGTAATCCGACAGAGTGCGTCCGTCC 1608 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC- 16842 |||| |||||||| || |||| || ||||| ||||| || | ||||||||||| Sbjct 1607 TCCAGCTGTTTGCCAGCGAAAATCAGACGCTGCTGGTCTGGCGGAATTCCCTCTTTGTCT 1548 Query 16843 -GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGG 16901 || || || ||| || | | | ||||| | ||| ||||| || || | Sbjct 1547 TGGATCTTAGC--CTTTACATTCTCAATGGTGTCAGAAGCCTCAACTTCCAAAGTTATTG 1490 Query 16902 TTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 |||| || ||||| || || ||||| |||||||| Sbjct 1489 TTTTGCCTGTCAGGGTCTTCACAAAGATCTGCAT 1456 >seq3664 Length=101255 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/214 (69%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| ||| || ||||| || ||||| |||||||| || | || || ||||| Sbjct 96129 AGAACCAAATGAAGGGTGGATTCTTTTTGGATGTTGTAATCCGACAGAGTGCGTCCGTCC 96070 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC- 16842 |||| |||||||| || |||| || ||||| ||||| || | ||||||||||| Sbjct 96069 TCCAGCTGTTTGCCAGCGAAAATCAGACGCTGCTGGTCTGGCGGAATTCCCTCTTTGTCT 96010 Query 16843 -GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGG 16901 || || || ||| || | | | ||||| | ||| ||||| || || | Sbjct 96009 TGGATCTTAGC--CTTTACATTCTCAATGGTGTCAGAAGCCTCAACTTCCAAAGTTATTG 95952 Query 16902 TTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 |||| || ||||| || || ||||| |||||||| Sbjct 95951 TTTTGCCTGTCAGGGTCTTCACAAAGATCTGCAT 95918 Score = 82.4 bits (90), Expect = 6e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || || || || | || ||||| ||| || || || || ||||| ||||||||||| | Sbjct 94548 CCACCACGGAGACGCAATACCAGATGGAGGGTAGATTCTTTTTGGATGTTGTAGTCTGAG 94489 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| | | || || | ||| || || ||| | || | ||||||||||| || Sbjct 94488 AGGGTGCGGCCATCTTCAAGTTGCTTTCCAGCAAAGATTAAACGCTGTTGGTCTGGGGGA 94429 Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888 | |||||| ||||| |||| ||| || | | | ||||| | ||| Sbjct 94428 ATGCCCTCCTTGTCTTGGATTTTAGCCTTGACGTTCTCAATGGTGTCCGATGCCTCAACC 94369 Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATT 16936 |||| ||||| ||||| || ||||| || ||||||||||| |||||| Sbjct 94368 TCCAAAGTGATTGTTTTGCCCGTCAGGGTCTTGACAAAAATTTGCATT 94321 >seq4530 Length=43051 Score = 82.4 bits (90), Expect = 6e-11 Identities = 159/233 (68%), Gaps = 4/233 (2%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || || || || | |||||||| || || || || ||||| || ||||||||||| | | Sbjct 13919 CCACCACGCAGACGCAGTACCAAGTGTAGAGTAGATTCCTTCTGGATGTTGTAGTCTGAC 13978 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | || | | || || | ||||| || ||| | ||||| | ||| ||||| || Sbjct 13979 AGTGTGCGGCCATCTTCTAGCTGTTTTCCGGCAAAGATAAGTCTCTGCTGGTCTGGGGGA 14038 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | |||||||||||| || || ||| || || | | | || || | ||||| Sbjct 14039 ATGCCCTCTTTGTCCTGGATCTTAGCT--TTTACATTCTCGATGGTATCAGCAGGCTCGA 14096 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTTG 16939 |||| |||||||| || || |||| ||| || || || |||||||| ||| Sbjct 14097 CCTCCAAAGTGATGGTCTTACCAGTCAACGTCTTCACGAAGATCTGCATATTG 14149 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 404960620204990