Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Operophtera_20brumata_20[genbank_20GCA_5F001266575.1_202015-08-11]
25,801 sequences; 638,207,720 total letters
Query= NC_008035.3
Length=126629
Score E
Sequences producing significant alignments: (Bits) Value
seq754 237 1e-57
seq3481 116 3e-21
seq3754 84.2 2e-11
seq3664 84.2 2e-11
seq4530 82.4 6e-11
>seq754
Length=177731
Score = 237 bits (262), Expect = 1e-57
Identities = 785/1200 (65%), Gaps = 53/1200 (4%)
Strand=Plus/Plus
Query 95832 TTCATGGCATTAAGCAGATCGCCATTGTCAGCGTCTATTTCCCAGGCAAACAAACCTCCT 95891
||||||||||| | | ||||| ||||| ||||||||||||||||| |||| ||| ||
Sbjct 50420 TTCATGGCATTCAATATGTCGCCGTTGTCCGCGTCTATTTCCCAGGCGAACAGACCCCCC 50479
Query 95892 AACTTGTTTTGTTCCACATATCGACCTTTAGCTATAACAGAATCAACACTATCATATGAA 95951
| ||| || | | ||||||| || || || || || | || || |
Sbjct 50480 AGCTTATTATTTCTCACATATTTCCCCTTGGCAATCGTCGACCTCGCGTCGTCGTACGTG 50539
Query 95952 ATTAAATCGCCTTTGGTTTTATCAAAAACGTAGGCGGCTTTTGCTACGTTGTCAAATTTA 96011
|| | ||| || | | | || ||||||| |||| ||| || |||| ||
Sbjct 50540 ATAAGATCCCCCGTAGCCTCTCTGAACACGTAGGGAGCTTCTGCAACACTGTCGTAT--- 50596
Query 96012 ACAATAT----ATTTGTTT------ATTTCGTTTTTGATTTGGCGATAATCAACAACGCC 96061
| ||| ||||| | |||||||| || | | || ||||| || ||
Sbjct 50597 -CGATACTCCCATTTGCCTTGAGCGATTTCGTTCGCTATCTCTCTGTAGTCAACGACTCC 50655
Query 96062 ATCTTCCCAAGTGCCCGAAACGGGCCCGTTACTACTTCCCAAAAAATAG-TTATCGTTTT 96120
||| | ||||||||| || || || || |||||| || | || | | ||
Sbjct 50656 ATCCTGCCAAGTGCCTTTGACAGGTCCTGTAGCG-TTCCCAGTGAAGGGGTTCTTGCCTT 50714
Query 96121 CGTAATT-TGACACTCCAGTCCAGCCGCGACCGTACATGGCCACGCCCACAATAATTTTG 96179
| || | ||| ||||||||||| || || |||||||| || || || || | ||| ||
Sbjct 50715 CATAGTCGTGA-ACTCCAGTCCATCCTCGGCCGTACATAGCAACACCTACGACAATCTTC 50773
Query 96180 CGCGGGTCCACGCCTTGATTTGTGAGCA---ATTTAACGGCATGGTCCGTGTTGTACAGC 96236
|||| || |||||| | ||||| |||| || || || ||| |||| |
Sbjct 50774 TTGGGGTTAACACCTTGA---GCGAGCAGGAATTTCACTCCAAAATCAGTGGTGTAAGTC 50830
Query 96237 TCGTTTGGGTTCCAACTCGGCGCGTACAGTGTAGTTTGGTATCCCAA---ATCAATGTTT 96293
|| || || |||| || |||||||| | || |||| ||| | |||| ||
Sbjct 50831 TCCTTGGGCATCCACGCAGGAGCGTACAGAGATGTCTGGTGTCCGAGGGTATCA---TTA 50887
Query 96294 GACCACGCGCCTTTAAAATCGTAGCTCATGAGAAATATTTTGTCGAGGAACTTTTGCGCA 96353
||||| || |||||||| ||||||||||| || || || | ||| | | |||| || |||
Sbjct 50888 GACCAGGCTCCTTTAAAGTCGTAGCTCATCAGGAAGATATGGTCCATGTACTTCTGGGCA 50947
Query 96354 ACGTCGTATTTTACTACAGCAATTTTGTCGTGGCCGGCACTGATTGCACTTGTCAACTCG 96413
|| ||| | || || || ||||| ||||||||||| || |||| ||||
Sbjct 50948 GCGCTGTAGTCGACCACTTGGATCTTGTCCCAACCGGCACTGATGGCGGAAGTCAGCTCG 51007
Query 96414 TACGTTTTGCCCGTTTGCAGTTGCAA-CTCGTCTAACATCACGCGCAATTCCTTTAATAG 96472
|| | || || |||| ||| | | ||| | | ||| | || | |||||| | ||
Sbjct 51008 TATTTCTTACCAGTTT-CAGCGGATAGCTCATTGAGCATGTCACGTATTTCCTTCATGAG 51066
Query 96473 AATGTTGTACGT-GTCAGCGTCGCGCTCTTTGTTGCCGAGCGTC-GGGTTGGCGCCTTTA 96530
|| |||| | || | || ||| | || || ||| |||||||| |||||
Sbjct 51067 ----TTCAACGTAGACATGGCCGTCCTCAGGGCCTCCAAG-GTCAGGGTTGGCACCTTTG 51121
Query 96531 CCGCCCGGAAATTCCCAGTCGATGTCCACTCCGTCGAAAAATTTCCAAACCTGCAAAAAT 96590
|| || || || ||||| ||||| || || || ||||| ||||||||| |||| ||
Sbjct 51122 CCTCCAGGGAACTCCCAATCGATATCAACACCATCGAAGAATTTCCAAGTTTGCAGGAAG 51181
Query 96591 TCTCTGACGGAGTCTACAAACACGCGCCGTTTTTCCGCGTCGTG-CATGTAATA----GA 96645
||| | || || | || || ||| || | || ||| || ||| ||| | ||
Sbjct 51182 TCTTTCACCGATGCGACGAA-ACG----GTCTCTCTTGGTCTTGTCATTTAAGAAAAAGA 51236
Query 96646 ACGGGTCGGACAGTGTCCAGCCGCCGATAGACGGCAGAATTTTAAGGTGTGGATTAGCCA 96705
| || || | ||| |||||||| ||||| || || || ||||| |||| || || ||
Sbjct 51237 ATGGATCAGCCAGGGTCCAGCCACCGATGGATGGGAGGATTTTCAGGTCAGGTTTCGCTT 51296
Query 96706 GTTTGGCCGCCATCAACTGACCAAAGTTGCCTTTGTAGGGCTCGTTCCAAGCAGACACGC 96765
|||| | ||| | ||| || || ||||||||||| || |||||||||| ||||| |
Sbjct 51297 GTTTCAACATCATGAGCTGGCCGAAATTGCCTTTGTAAGGTTCGTTCCAAGAAGACAGAC 51356
Query 96766 CCTTTTGCGGTTTTTGTACTGCGGCCCAAGGGTCGTGAATAGCAACTTTAAAATCTGAAC 96825
| || || ||||| || | || ||||| || || || || | ||||| || || |
Sbjct 51357 CTTTCTGGGGTTTCTGCAAGGCTGCCCATGGATCATGGATTGTCACTTTGAAGTCCTCTC 51416
Query 96826 GGCCCTGGCAAGAGCGTTGCAGCGCTTCAAAACTACC--GGGTATGGTTTTAAGGGCATC 96883
|||| ||| || |||||||| |||| ||||| || | | | || || | ||
Sbjct 51417 GGCCGCTGCAGGAACGTTGCAGAGCTTGGAAACTGCCTTCGATCTCCTTCAAACTG--TC 51474
Query 96884 GTTAAGGCCGTCGCCGCCACAAATGGGTATAAACCCGTACAACAAATGTGACAAGTTGGG 96943
||||| ||| || || || ||||| || || || ||||||| | ||| | | || ||
Sbjct 51475 GTTAATGCCATCACCTCCGCAAATTGGGATGAAACCGTACAGGAGATGCGTGAGATTTGG 51534
Query 96944 CAGCGGCACTTTGTCCACCGGAAAGTTACGACCATACACGCCCCATTCCACAAAATACGC 97003
| || | |||||| ||||| || | |||||||||||||| || || || ||
Sbjct 51535 TACTGGGATACGGTCCACTGGAAACTTTCTGGGGTACACGCCCCATTCGACGAAGTAAGC 51594
>seq3481
Length=53562
Score = 116 bits (128), Expect = 3e-21
Identities = 165/232 (71%), Gaps = 0/232 (0%)
Strand=Plus/Minus
Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768
||||||| |||||| || |||| || || || || ||||| || || ||||| |||| |
Sbjct 24278 CCTCCTCTTAGCCTGAGCACCAAGTGAAGAGTAGATTCCTTCTGGATATTGTAATCGGAC 24219
Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828
| ||| | | || |||| |||||||| || | || || ||||| |||||| ||
Sbjct 24218 AGGGTGCGGCCATCTTCCAGCTGTTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGCGGA 24159
Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888
| ||||| || || ||| | |||||| | | | ||||| || ||||
Sbjct 24158 ATACCCTCCTTATCCTGAATCTTGGCCTTCACGTTCTCAATGGTGTCCGAGGCCTCCACC 24099
Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTTGT 16940
|| | ||||||||| || ||||| || |||||||| ||||||||||||||||
Sbjct 24098 TCAAGGGTGATGGTCTTCCCGGTTAGGGTTTTGACGAAAATCTGCATTTTGT 24047
>seq3754
Length=50117
Score = 84.2 bits (92), Expect = 2e-11
Identities = 148/214 (69%), Gaps = 4/214 (2%)
Strand=Plus/Minus
Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783
|| |||| ||| || ||||| || ||||| |||||||| || | || || |||||
Sbjct 1667 AGAACCAAATGAAGGGTGGATTCTTTTTGGATGTTGTAATCCGACAGAGTGCGTCCGTCC 1608
Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC- 16842
|||| |||||||| || |||| || ||||| ||||| || | |||||||||||
Sbjct 1607 TCCAGCTGTTTGCCAGCGAAAATCAGACGCTGCTGGTCTGGCGGAATTCCCTCTTTGTCT 1548
Query 16843 -GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGG 16901
|| || || ||| || | | | ||||| | ||| ||||| || || |
Sbjct 1547 TGGATCTTAGC--CTTTACATTCTCAATGGTGTCAGAAGCCTCAACTTCCAAAGTTATTG 1490
Query 16902 TTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
|||| || ||||| || || ||||| ||||||||
Sbjct 1489 TTTTGCCTGTCAGGGTCTTCACAAAGATCTGCAT 1456
>seq3664
Length=101255
Score = 84.2 bits (92), Expect = 2e-11
Identities = 148/214 (69%), Gaps = 4/214 (2%)
Strand=Plus/Minus
Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783
|| |||| ||| || ||||| || ||||| |||||||| || | || || |||||
Sbjct 96129 AGAACCAAATGAAGGGTGGATTCTTTTTGGATGTTGTAATCCGACAGAGTGCGTCCGTCC 96070
Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC- 16842
|||| |||||||| || |||| || ||||| ||||| || | |||||||||||
Sbjct 96069 TCCAGCTGTTTGCCAGCGAAAATCAGACGCTGCTGGTCTGGCGGAATTCCCTCTTTGTCT 96010
Query 16843 -GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGG 16901
|| || || ||| || | | | ||||| | ||| ||||| || || |
Sbjct 96009 TGGATCTTAGC--CTTTACATTCTCAATGGTGTCAGAAGCCTCAACTTCCAAAGTTATTG 95952
Query 16902 TTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
|||| || ||||| || || ||||| ||||||||
Sbjct 95951 TTTTGCCTGTCAGGGTCTTCACAAAGATCTGCAT 95918
Score = 82.4 bits (90), Expect = 6e-11
Identities = 155/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768
|| || || || | || ||||| ||| || || || || ||||| ||||||||||| |
Sbjct 94548 CCACCACGGAGACGCAATACCAGATGGAGGGTAGATTCTTTTTGGATGTTGTAGTCTGAG 94489
Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828
| ||| | | || || | ||| || || ||| | || | ||||||||||| ||
Sbjct 94488 AGGGTGCGGCCATCTTCAAGTTGCTTTCCAGCAAAGATTAAACGCTGTTGGTCTGGGGGA 94429
Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888
| |||||| ||||| |||| ||| || | | | ||||| | |||
Sbjct 94428 ATGCCCTCCTTGTCTTGGATTTTAGCCTTGACGTTCTCAATGGTGTCCGATGCCTCAACC 94369
Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATT 16936
|||| ||||| ||||| || ||||| || ||||||||||| ||||||
Sbjct 94368 TCCAAAGTGATTGTTTTGCCCGTCAGGGTCTTGACAAAAATTTGCATT 94321
>seq4530
Length=43051
Score = 82.4 bits (90), Expect = 6e-11
Identities = 159/233 (68%), Gaps = 4/233 (2%)
Strand=Plus/Plus
Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768
|| || || || | |||||||| || || || || ||||| || ||||||||||| | |
Sbjct 13919 CCACCACGCAGACGCAGTACCAAGTGTAGAGTAGATTCCTTCTGGATGTTGTAGTCTGAC 13978
Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828
| || | | || || | ||||| || ||| | ||||| | ||| ||||| ||
Sbjct 13979 AGTGTGCGGCCATCTTCTAGCTGTTTTCCGGCAAAGATAAGTCTCTGCTGGTCTGGGGGA 14038
Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886
| |||||||||||| || || ||| || || | | | || || | |||||
Sbjct 14039 ATGCCCTCTTTGTCCTGGATCTTAGCT--TTTACATTCTCGATGGTATCAGCAGGCTCGA 14096
Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTTG 16939
|||| |||||||| || || |||| ||| || || || |||||||| |||
Sbjct 14097 CCTCCAAAGTGATGGTCTTACCAGTCAACGTCTTCACGAAGATCTGCATATTG 14149
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 404960620204990
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |