Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Operophtera_20brumata_20[genbank_20GCA_5F001266575.1_202015-08-11] 25,801 sequences; 638,207,720 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq955 273 3e-68 >seq955 Length=106330 Score = 273 bits (302), Expect = 3e-68 Identities = 1130/1765 (64%), Gaps = 28/1765 (2%) Strand=Plus/Minus Query 61850 GTGAATTGAATGG-GAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAG 61908 |||||||| || | | || | || |||||||| | || || ||||| || ||||| | Sbjct 60339 GTGAATTGGATCGCGTTCGCA-GCCGGTTTCGTCCTCAGGTAATACATGCCAGTTTTCAA 60281 Query 61909 ACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTAT 61968 ||| | ||||| ||| ||| || || |||| ||| ||| | || || || | Sbjct 60280 ACCCATTTTCCATGCGTGAAAGTGAATTGATGTTAATTTACCATAGTTGGGTTCAGCCAC 60221 Query 61969 ATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTAT 62028 ||| || || | || || || || || || || || || | || || ||||| | || Sbjct 60220 ATGAATGTTGAATGACTGGCTCTGGTCTATAAAAGCCCCTCGATCAGCTGCCATCTGAAT 60161 Query 62029 AATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCTTCTGGAA 62087 ||||||| || ||| ||||| | || || || || || |||| | |||| |||| Sbjct 60160 GCTCGTCTTGACTGAAATCTCCCAGACTGTCTTGTACAATTCTCTTATT-TCTTTGGGAA 60102 Query 62088 G-GTTTG--TATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCATCAT 62144 | || |||| || | |||||| | || || || || || || |||| Sbjct 60101 TAGCTTCAATATTTTGGACAGATCCATTGTTGTGAATGATTAGGTTTTTCATATCTTCAT 60042 Query 62145 TCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTC 62204 ||| || | |||||| | | ||| || ||||| | || || || || || || | Sbjct 60041 CCCACAAGTCCGCCTCGGTCAGATCTCGCAGCAGATGATGGTTCACGACCTGGAACTCGC 59982 Query 62205 CAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTATTTC 62264 | |||| || || || ||| || ||| ||| | || || | ||||| ||||| | Sbjct 59981 CCGACAGGACCCTGCGCTGGTAGATGTTAGACGTAAAAGGCTCGAAGGACTCGTTATTGC 59922 Query 62265 CCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGAC 62324 | | ||||| || || || || || ||||| ||||| | || | |||| |||| Sbjct 59921 CGAGGATTTGTGCGGTGGAGGCGGTGGGCATCGGTGCTAATAAGAGCGAGTTTCGGAGAC 59862 Query 62325 CGTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGGTACAACNN 62384 | | | | |||||| ||||| |||| |||| | ||| || || | || Sbjct 59861 CATGTTTAGCGATTTTTTCTTTGAGAGCACCCCAGTCCCATAGGTCTGTGGGCGTTTTGT 59802 Query 62385 NNNNNNNNNNNNNTTGTAGAATACCGTTACTGGC-GTACGATCCTACATATGTATCGTAT 62443 ||| | || || | || | | || | || || || || || Sbjct 59801 TCCACATGTCGTATTGCAAGATGCCCTGGCTCACCGGAC-AGCCCGGGTAAGTTTCATAA 59743 Query 62444 GGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCG 62503 || |||||||| || || || || || ||||| ||||| || |||||||||||| Sbjct 59742 ACGCCAATTTTCTCAGCGAGCTCGCAGCTTGCTTCTAACGCACCATAGTAAATGGTTTCG 59683 Query 62504 AAGATCTTCTTATTTAGATC--TTGC-GCTTCCAGGCTATCAAATGGATAATTTAAGAGA 62560 || |||| | ||| | | |||| ||||| || ||| | || | | || Sbjct 59682 AAAATCTGTTGATTCAACTTGATTGCAGCTTCA---CTTTCATACGGGATACGCATCAGG 59626 Query 62561 ATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAG 62620 | || || || || |||||||||||||| || ||||| || | ||| | | | || ||| Sbjct 59625 ACGAAAGCATCGGCCAATCCTTGAACACCGATTCCGATCGGCCGATGCCGCATGTTTGAG 59566 Query 62621 ATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTG-AC 62679 | | |||||||| || || || | || | ||||| ||||| || ||||| ||| || Sbjct 59565 TTCTTGGCTTCTGGGATCGGGTAGAAGTTCACCTCTATGATTTTGTTTAGATT-CTGCAC 59507 Query 62680 AATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAA---TCGCCCATCTATTACAAA 62736 | | ||| || || || || || ||| | | | | |||| | || || Sbjct 59506 GACGATTTTAGTGACTTCTTTTAGCTTCTCAAAGTTATACGTTTTGTCATCATTGACGAA 59447 Query 62737 CATGTTCAATGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTG 62796 |||||| ||| || || |||| |||||| ||||| || |||| | || || | Sbjct 59446 TCTGTTCAGTGCGACGGACGCCAAATTACACACGGCAACTTCATCCGGCGACGTGTACTC 59387 Query 62797 TATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTT 62856 | ||||| ||||| |||||||| || ||||| || || | || | |||||| || || Sbjct 59386 AACGATCTCCGTGCAGAGATTACTGCATTTGATAGTGCCCAGGTTCTTTTGATTGCTTTT 59327 Query 62857 TTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTAT 62916 |||| || || || || ||||| ||| |||| || || ||||| | || | ||| || Sbjct 59326 ACTGTTGCATGCGTCTTTGTAAAGCATGTATGGGGTCCCGGTTTCGACTTGCGCTTCAAT 59267 Query 62917 AATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTATCTCTTTTCTCTT--TCG 62974 || || ||||| | ||| | || | | | | | || || |||||||| || Sbjct 59266 GATAGCCTTCCACAAAACTTGCGCTCTCACTT--GCCTCACATATCGTTTCTCTTGTTCA 59209 Query 62975 TATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAGTCCAGGACATTCA 63034 ||| | ||| || ||||||||||| ||||| | | |||| || ||||| || Sbjct 59208 TATCGCTCATATAACTTCTCGAACTCGTCCCCCCAGCAGTCGGCCAGGCCGGGACAGTCG 59149 Query 63035 TCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGA 63094 | || ||||| | ||| || |||| || |||| |||||| || | || || Sbjct 59148 TGGGGGCACATGAGGCTCCATTCGCCGTTGCTCTCGACTCTTTTCATGAACAAGTCTGGT 59089 Query 63095 ATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTA 63154 ||||| || | ||| || ||||| | | | |||||| || || || || || || Sbjct 59088 ATCCAGAGCCCATAAAAAAGCTCTCTTGCGCGAACTTCCTCCTTCCCAGTGTTTTTCTTG 59029 Query 63155 AGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCA 63214 ||||| | |||| | | ||||| | |||||||| || | ||| | || | | || Sbjct 59028 AGATCCAAGAACTCAAATATATCCGCGTGCCACGGCTCGAGGTAGACCGCGAAGGCGCCG 58969 Query 63215 GGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATT 63274 || |||||||| || || || || | ||| ||||| ||||| ||||| || | | ||| Sbjct 58968 GGTCGTTTGTTCCCGCCTTGGTCGACGTACCTAGCTGTGTTGTTATAGACGCGGAGCATG 58909 Query 63275 GGAATAATACCATTGGATGTACCATTGGTCCCTGAGATATAGCTTCCACTGGCACGAAT- 63333 || | | || ||||| || ||||| || | ||| ||| ||| |||| || || Sbjct 58908 GGTACGAGGCCGTTGGAGACGCCGTTGGTTCCGGCGATGTAGGATCCCTTGGCGCGGATG 58849 Query 63334 -ATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTA 63392 | | || ||| | || || || || || ||| ||||| | ||||| |||| | Sbjct 58848 CAGT-GTACGTGA-ACGCCGATACCGCCCGCTGATTTGGAGATGAGCGCGCAATGTTTGA 58791 Query 63393 ACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACA 63452 ||| || ||||||||||| || || || ||| ||||| | || || ||| || | Sbjct 58790 GCGTGTCGTAGATGCCCTCGATGCTGTCGTCCTTCATGGCGATGAGGAAGCAGGAGGAGA 58731 Query 63453 TTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAACCATTTTT 63512 ||| | || || |||| || | || || ||||| || || | || | Sbjct 58730 GCTGGGGGCGGGGCGTGGCCGCCGAGAACAGCGTGGGGCTCGCGTGCGTGAAGTACTTCT 58671 Query 63513 CAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTG 63572 | || || || |||||||| | ||||| ||||| || ||| ||||| || | | Sbjct 58670 CTGACAGCAGGTTGTACGTGTTGATAGCGGAGTCGATGTCCTCGCCGTGAATGCCGATGG 58611 Query 63573 CGACACGCATTAACATGTGCTGAGG 63597 || ||||| | ||||||||| || Sbjct 58610 AAACTCGCATCAGCATGTGCTGGGG 58586 Score = 87.8 bits (96), Expect = 2e-12 Identities = 113/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 63819 GtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAATGGCATAAT 63878 ||||||| || || ||||| | || |||| ||| | ||| || ||||||||||| || | Sbjct 55892 GTTTTTTAGTCTCCTTGTGCAAGTTGGATATGGCGAGTCTGGCTGCTAGAATGGCGTAGT 55833 Query 63879 CCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCG 63938 ||||||| | || || || || ||| | || || |||| | ||||||||||| | Sbjct 55832 CCGGATGGTTGGTGGTCATCGTAGCCGCTGTCTCCGCAGCCAAGTTATCCAATTCTACGG 55773 Query 63939 TTGTTACACCATTATATATTCCTTGGATAACCTTCA 63974 | || || ||| |||||| || ||| ||||||| Sbjct 55772 TGGTGACTCCAGAATATATGCCGCTGATTACCTTCA 55737 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633427645759600