Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Operophtera_20brumata_20[genbank_20GCA_5F001266575.1_202015-08-11]
25,801 sequences; 638,207,720 total letters
Query= NC_008348.1
Length=168041
Score E
Sequences producing significant alignments: (Bits) Value
seq754 345 5e-90
>seq754
Length=177731
Score = 345 bits (382), Expect = 5e-90
Identities = 807/1198 (67%), Gaps = 41/1198 (3%)
Strand=Plus/Plus
Query 51260 GTGCATGGCGTTCAGTAGGTCGCCGTTGTCAGCGTCGATTTCCCACGCAAACAATCCCGC 51319
|| |||||| |||| || |||||||||||| ||||| |||||||| || |||| ||| |
Sbjct 50419 GTTCATGGCATTCAATATGTCGCCGTTGTCCGCGTCTATTTCCCAGGCGAACAGACCCCC 50478
Query 51320 CAACCCGTTCGCAAGCACGTACTGGCCCTTGGCGCGAACG--GATCGAGCGTTGTCGAAC 51377
|| | || ||| || | |||||||| | || || | |||| |||| ||
Sbjct 50479 CAGCTTATTATTTCTCACATATTTCCCCTTGGCA--ATCGTCGACCTCGCGTCGTCGTAC 50536
Query 51378 GTGATCAGGTTGCCCGCGATCGGTTCGAAGCCGTACGCAGCCTCGGCGATCAGATCGTAG 51437
||||| || | |||| | | ||| |||| | ||| || || | |||||
Sbjct 50537 GTGATAAGATCCCCCGTAGCCTCTCTGAACACGTAGGGAGCTTCTGCAACACTGTCGTA- 50595
Query 51438 TAGA-ACTCGTAGT--CTTTGA-CGAACTCGTTCGCGATCTGCCGATAGTCGACCACCCC 51493
| || |||| | | | |||| ||| |||||||| |||| | ||||| || || ||
Sbjct 50596 TCGATACTCCCATTTGCCTTGAGCGATTTCGTTCGCTATCTCTCTGTAGTCAACGACTCC 50655
Query 51494 ATTTTCCCAGGTGCCTTCGATGGGTCCGCCGGCGACGCCGCTGAACCAGTTCGG---TTC 51550
|| | ||| ||||||| || ||||| ||| || |||| |||| |||
Sbjct 50656 ATCCTGCCAAGTGCCTTTGACAGGTCCTGTAGCGTTCCCAGTGAAGGGGTTCTTGCCTTC 50715
Query 51551 GTAGTCGTAGCCGGTCACGTTCGACCAGCCGCGAGCGTACATCGCCACGCCGACGACGAT 51610
||||||| | || || ||| || || ||||||| || || || ||||| ||
Sbjct 50716 ATAGTCGTGAAC--TCCAGT----CCATCCTCGGCCGTACATAGCAACACCTACGACAAT 50769
Query 51611 CTTCTGATTGCGCACGCCCTGTTCGAGAAGCGACGACACGGCATAGTCGGTGGTGTACTT 51670
||||| | || || || |||| || | ||| || | || |||||||| |
Sbjct 50770 CTTCTTGGGGTTAACACCTTGAGCGAGCAGGAATTTCACTCCAAAATCAGTGGTGTAAGT 50829
Query 51671 TTCGTCGGGGTTCCATTGGGGCGCGAACAGTGTGGTCTGGTAGCCCAGATCGGTGT---T 51727
|| | ||| |||| || ||| |||| | ||||||| || || ||| | |
Sbjct 50830 CTCCTTGGGCATCCACGCAGGAGCGTACAGAGATGTCTGGTGTCCGAG---GGTATCATT 50886
Query 51728 GGACCACGCACCCTTGAAATCGTAGTTCATGAGGAAAATGTAATCCAACTGCGTCTGCGC 51787
||||| || || || || |||||| |||| ||||| || | |||| | | |||| ||
Sbjct 50887 AGACCAGGCTCCTTTAAAGTCGTAGCTCATCAGGAAGATATGGTCCATGTACTTCTGGGC 50946
Query 51788 CCGAGC-GTAGTCGACGACTTGAATTTTATCGTAGCCCGCGCTGATGGCGCTGGTCAACA 51846
| || ||||||||| ||||| || || || | || || ||||||||| |||| |
Sbjct 50947 A-GCGCTGTAGTCGACCACTTGGATCTTGTCCCAACCGGCACTGATGGCGGAAGTCAGCT 51005
Query 51847 GGTA---CGAACGGTTCGTGGCGGCGCTCAACTCGTCGAGCATGTCGCGCAGCTCGGTCA 51903
||| | || || | ||| | ||| | ||||||||| || | || |||
Sbjct 51006 CGTATTTCTTACCA---GTTTCAGCGGATAGCTCATTGAGCATGTCACGTATTTCCTTCA 51062
Query 51904 AAAGCGTCACGTACGTCG-CACCATCGCGATCGGGATCGCCCAGGTCGGGATTGGCGCCT 51962
|| ||| |||| | || || || || | || ||||| || ||||| |||
Sbjct 51063 TGAGT-TCA---ACGTAGACATGGCCGTCCTCAGGGCCTCCAAGGTCAGGGTTGGCACCT 51118
Query 51963 TTGCCGCCCGGAAACTCCCAGTCGACGTCGACTCCGTCGAAGAACTTCCAAGTCAGCAGA 52022
||||| || || |||||||| |||| || || || |||||||| |||||||| ||||
Sbjct 51119 TTGCCTCCAGGGAACTCCCAATCGATATCAACACCATCGAAGAATTTCCAAGTTTGCAGG 51178
Query 52023 AACTCGCGAACCGATTCGACGAA--GGTTGCGCGTTTGCTCGCGTCGTGCAGGAAGAAGA 52080
|| || |||||| ||||||| ||| | | ||| || ||| | | ||| ||||
Sbjct 51179 AAGTCTTTCACCGATGCGACGAAACGGTCTCTC--TTGGTCTTGTCATTTAAGAAAAAGA 51236
Query 52081 ACGGATCGGACAGCGTCCAACCGCCGATCGAGGGCAGAATCTTGAGCGAAGGATTGGCCC 52140
| ||||| | ||| ||||| || ||||| || || || || || || ||| || ||
Sbjct 51237 ATGGATCAGCCAGGGTCCAGCCACCGATGGATGGGAGGATTTTCAGGTCAGGTTTCGCTT 51296
Query 52141 GTTTGGCCGCCATCAGCTGTCCAAAGTTTCCCTTGTACGGATCGTTCCAGGCCGAGACGC 52200
|||| | ||| ||||| || || || || ||||| || |||||||| | || | |
Sbjct 51297 GTTTCAACATCATGAGCTGGCCGAAATTGCCTTTGTAAGGTTCGTTCCAAGAAGACAGAC 51356
Query 52201 CTTTCTGCGGTTTCTGCAGCGCCGCCCAGGGATCGTGAATCGTCACCTTAAAGTCCGACC 52260
||||||| |||||||||| || ||||| ||||| || || ||||| || |||||| |
Sbjct 51357 CTTTCTGGGGTTTCTGCAAGGCTGCCCATGGATCATGGATTGTCACTTTGAAGTCCTCTC 51416
Query 52261 TGCCCACGCACGACCGTTGCAACGCTTCGAAACTGTTGTCGATCGGTTTCAGGCTGTCGT 52320
||| ||| || ||||||| |||| ||||||| |||||| |||| |||||||
Sbjct 51417 GGCCGCTGCAGGAACGTTGCAGAGCTTGGAAACTGCCTTCGATCTCCTTCAAACTGTCGT 51476
Query 52321 TGATGCCGTCGCCTCCGCACATGGGAATGAAGCCGTACAGCAGATGCGACAGGTTCGGCA 52380
| ||||| || |||||||| || || ||||| |||||||| ||||||| || || || |
Sbjct 51477 TAATGCCATCACCTCCGCAAATTGGGATGAAACCGTACAGGAGATGCGTGAGATTTGGTA 51536
Query 52381 ACGGCACCAGATCTACGGGAAAGTTGCGCAAGTAAACGCCCCATTCGACAAAGTAGGC 52438
|| | | || || ||||| || | ||| |||||||||||||| ||||| ||
Sbjct 51537 CTGGGATACGGTCCACTGGAAACTTTCTGGGGTACACGCCCCATTCGACGAAGTAAGC 51594
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 537429816247960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |