Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Operophtera_20brumata_20[genbank_20GCA_5F001266575.1_202015-08-11] 25,801 sequences; 638,207,720 total letters Query= NC_008348.1 Length=168041 Score E Sequences producing significant alignments: (Bits) Value seq754 345 5e-90 >seq754 Length=177731 Score = 345 bits (382), Expect = 5e-90 Identities = 807/1198 (67%), Gaps = 41/1198 (3%) Strand=Plus/Plus Query 51260 GTGCATGGCGTTCAGTAGGTCGCCGTTGTCAGCGTCGATTTCCCACGCAAACAATCCCGC 51319 || |||||| |||| || |||||||||||| ||||| |||||||| || |||| ||| | Sbjct 50419 GTTCATGGCATTCAATATGTCGCCGTTGTCCGCGTCTATTTCCCAGGCGAACAGACCCCC 50478 Query 51320 CAACCCGTTCGCAAGCACGTACTGGCCCTTGGCGCGAACG--GATCGAGCGTTGTCGAAC 51377 || | || ||| || | |||||||| | || || | |||| |||| || Sbjct 50479 CAGCTTATTATTTCTCACATATTTCCCCTTGGCA--ATCGTCGACCTCGCGTCGTCGTAC 50536 Query 51378 GTGATCAGGTTGCCCGCGATCGGTTCGAAGCCGTACGCAGCCTCGGCGATCAGATCGTAG 51437 ||||| || | |||| | | ||| |||| | ||| || || | ||||| Sbjct 50537 GTGATAAGATCCCCCGTAGCCTCTCTGAACACGTAGGGAGCTTCTGCAACACTGTCGTA- 50595 Query 51438 TAGA-ACTCGTAGT--CTTTGA-CGAACTCGTTCGCGATCTGCCGATAGTCGACCACCCC 51493 | || |||| | | | |||| ||| |||||||| |||| | ||||| || || || Sbjct 50596 TCGATACTCCCATTTGCCTTGAGCGATTTCGTTCGCTATCTCTCTGTAGTCAACGACTCC 50655 Query 51494 ATTTTCCCAGGTGCCTTCGATGGGTCCGCCGGCGACGCCGCTGAACCAGTTCGG---TTC 51550 || | ||| ||||||| || ||||| ||| || |||| |||| ||| Sbjct 50656 ATCCTGCCAAGTGCCTTTGACAGGTCCTGTAGCGTTCCCAGTGAAGGGGTTCTTGCCTTC 50715 Query 51551 GTAGTCGTAGCCGGTCACGTTCGACCAGCCGCGAGCGTACATCGCCACGCCGACGACGAT 51610 ||||||| | || || ||| || || ||||||| || || || ||||| || Sbjct 50716 ATAGTCGTGAAC--TCCAGT----CCATCCTCGGCCGTACATAGCAACACCTACGACAAT 50769 Query 51611 CTTCTGATTGCGCACGCCCTGTTCGAGAAGCGACGACACGGCATAGTCGGTGGTGTACTT 51670 ||||| | || || || |||| || | ||| || | || |||||||| | Sbjct 50770 CTTCTTGGGGTTAACACCTTGAGCGAGCAGGAATTTCACTCCAAAATCAGTGGTGTAAGT 50829 Query 51671 TTCGTCGGGGTTCCATTGGGGCGCGAACAGTGTGGTCTGGTAGCCCAGATCGGTGT---T 51727 || | ||| |||| || ||| |||| | ||||||| || || ||| | | Sbjct 50830 CTCCTTGGGCATCCACGCAGGAGCGTACAGAGATGTCTGGTGTCCGAG---GGTATCATT 50886 Query 51728 GGACCACGCACCCTTGAAATCGTAGTTCATGAGGAAAATGTAATCCAACTGCGTCTGCGC 51787 ||||| || || || || |||||| |||| ||||| || | |||| | | |||| || Sbjct 50887 AGACCAGGCTCCTTTAAAGTCGTAGCTCATCAGGAAGATATGGTCCATGTACTTCTGGGC 50946 Query 51788 CCGAGC-GTAGTCGACGACTTGAATTTTATCGTAGCCCGCGCTGATGGCGCTGGTCAACA 51846 | || ||||||||| ||||| || || || | || || ||||||||| |||| | Sbjct 50947 A-GCGCTGTAGTCGACCACTTGGATCTTGTCCCAACCGGCACTGATGGCGGAAGTCAGCT 51005 Query 51847 GGTA---CGAACGGTTCGTGGCGGCGCTCAACTCGTCGAGCATGTCGCGCAGCTCGGTCA 51903 ||| | || || | ||| | ||| | ||||||||| || | || ||| Sbjct 51006 CGTATTTCTTACCA---GTTTCAGCGGATAGCTCATTGAGCATGTCACGTATTTCCTTCA 51062 Query 51904 AAAGCGTCACGTACGTCG-CACCATCGCGATCGGGATCGCCCAGGTCGGGATTGGCGCCT 51962 || ||| |||| | || || || || | || ||||| || ||||| ||| Sbjct 51063 TGAGT-TCA---ACGTAGACATGGCCGTCCTCAGGGCCTCCAAGGTCAGGGTTGGCACCT 51118 Query 51963 TTGCCGCCCGGAAACTCCCAGTCGACGTCGACTCCGTCGAAGAACTTCCAAGTCAGCAGA 52022 ||||| || || |||||||| |||| || || || |||||||| |||||||| |||| Sbjct 51119 TTGCCTCCAGGGAACTCCCAATCGATATCAACACCATCGAAGAATTTCCAAGTTTGCAGG 51178 Query 52023 AACTCGCGAACCGATTCGACGAA--GGTTGCGCGTTTGCTCGCGTCGTGCAGGAAGAAGA 52080 || || |||||| ||||||| ||| | | ||| || ||| | | ||| |||| Sbjct 51179 AAGTCTTTCACCGATGCGACGAAACGGTCTCTC--TTGGTCTTGTCATTTAAGAAAAAGA 51236 Query 52081 ACGGATCGGACAGCGTCCAACCGCCGATCGAGGGCAGAATCTTGAGCGAAGGATTGGCCC 52140 | ||||| | ||| ||||| || ||||| || || || || || || ||| || || Sbjct 51237 ATGGATCAGCCAGGGTCCAGCCACCGATGGATGGGAGGATTTTCAGGTCAGGTTTCGCTT 51296 Query 52141 GTTTGGCCGCCATCAGCTGTCCAAAGTTTCCCTTGTACGGATCGTTCCAGGCCGAGACGC 52200 |||| | ||| ||||| || || || || ||||| || |||||||| | || | | Sbjct 51297 GTTTCAACATCATGAGCTGGCCGAAATTGCCTTTGTAAGGTTCGTTCCAAGAAGACAGAC 51356 Query 52201 CTTTCTGCGGTTTCTGCAGCGCCGCCCAGGGATCGTGAATCGTCACCTTAAAGTCCGACC 52260 ||||||| |||||||||| || ||||| ||||| || || ||||| || |||||| | Sbjct 51357 CTTTCTGGGGTTTCTGCAAGGCTGCCCATGGATCATGGATTGTCACTTTGAAGTCCTCTC 51416 Query 52261 TGCCCACGCACGACCGTTGCAACGCTTCGAAACTGTTGTCGATCGGTTTCAGGCTGTCGT 52320 ||| ||| || ||||||| |||| ||||||| |||||| |||| ||||||| Sbjct 51417 GGCCGCTGCAGGAACGTTGCAGAGCTTGGAAACTGCCTTCGATCTCCTTCAAACTGTCGT 51476 Query 52321 TGATGCCGTCGCCTCCGCACATGGGAATGAAGCCGTACAGCAGATGCGACAGGTTCGGCA 52380 | ||||| || |||||||| || || ||||| |||||||| ||||||| || || || | Sbjct 51477 TAATGCCATCACCTCCGCAAATTGGGATGAAACCGTACAGGAGATGCGTGAGATTTGGTA 51536 Query 52381 ACGGCACCAGATCTACGGGAAAGTTGCGCAAGTAAACGCCCCATTCGACAAAGTAGGC 52438 || | | || || ||||| || | ||| |||||||||||||| ||||| || Sbjct 51537 CTGGGATACGGTCCACTGGAAACTTTCTGGGGTACACGCCCCATTCGACGAAGTAAGC 51594 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 537429816247960