Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Operophtera_20brumata_20[genbank_20GCA_5F001266575.1_202015-08-11] 25,801 sequences; 638,207,720 total letters Query= NC_008725.1 Length=111953 Score E Sequences producing significant alignments: (Bits) Value seq754 224 7e-54 seq3664 113 3e-20 seq4530 105 5e-18 seq3481 96.9 2e-15 seq3754 86.0 4e-12 >seq754 Length=177731 Score = 224 bits (248), Expect = 7e-54 Identities = 485/719 (67%), Gaps = 15/719 (2%) Strand=Plus/Plus Query 84012 TTTGACCAAGCACCTTTAAAATCATAATTCATTAAAAATATTTTTCCTAAAGACTTTTGC 84071 || ||||| || |||||||| || || |||| | || || | | | |||| || Sbjct 50885 TTAGACCAGGCTCCTTTAAAGTCGTAGCTCATCAGGAAGATATGGTCCATGTACTTCTGG 50944 Query 84072 GCCTCGTCATAGTTTACCACGGCAATCTTGTCGTAACCCGCACTAATAGCGCTTGTTAAT 84131 || || |||| ||||| |||||||| |||| ||||| || ||| || | Sbjct 50945 GCAGCGCTGTAGTCGACCACTTGGATCTTGTCCCAACCGGCACTGATGGCGGAAGTCAGC 51004 Query 84132 TCGTAAACCCTGCCAGTTTGCGATTCTAGCTCGTCTAACATTGCGCGCAGTTCCTCTAAT 84191 ||||| | | ||||||| | |||||| | | ||| | || | ||||| | Sbjct 51005 TCGTATTTCTTACCAGTTTCAGCGGATAGCTCATTGAGCATGTCACGTATTTCCTTCATG 51064 Query 84192 ATTAAAATGTATGTTTTGGCGTCACGTTCAGCATCCCCCAACGAC-GGGTTGGCTCCTTT 84250 | | || ||| | | |||| |||| || |||| | | |||||||| ||||| Sbjct 51065 AGTTCAACGTAGACATGGCCGTCC---TCAGGG-CCTCCAAGGTCAGGGTTGGCACCTTT 51120 Query 84251 GCCTCCCGGAAATTCCCAATCGATGTCTACACCGTCGAAAAATTTCCATACTTGTAAAAA 84310 |||||| || || ||||||||||| || ||||| ||||| |||||||| ||| | || Sbjct 51121 GCCTCCAGGGAACTCCCAATCGATATCAACACCATCGAAGAATTTCCAAGTTTGCAGGAA 51180 Query 84311 CTCCTTAACCGAATTTACAAAAACGTTTCTTTTT-TCAACATTGTGCAT----GAAATAA 84365 || || ||||| || ||| || ||| || || |||| ||| |||| | Sbjct 51181 GTCTTTCACCGATGCGACGAAACGGTCTCTCTTGGTC----TTGT-CATTTAAGAAAAAG 51235 Query 84366 AACGGGTCCGACAACGTCCATCCTCCTATGGACGGAAGAATCTTTAGGTGCGGGTTCGCC 84425 || || || | || ||||| || || ||||| || || || || |||| || ||||| Sbjct 51236 AATGGATCAGCCAGGGTCCAGCCACCGATGGATGGGAGGATTTTCAGGTCAGGTTTCGCT 51295 Query 84426 AATTTAGCTGCCATCAATTGTCCAAAATTGCCTTTATACGGTTCGTTCCAAGCGGACACG 84485 ||| ||| | || || ||||||||||| || ||||||||||||| |||| Sbjct 51296 TGTTTCAACATCATGAGCTGGCCGAAATTGCCTTTGTAAGGTTCGTTCCAAGAAGACAGA 51355 Query 84486 CCCTTTTGGGGCTTTTGTACGGCGGCCCACGGATCGTGGATGGCAATTTTAAAATCCGCA 84545 || || ||||| || || | ||| ||||| ||||| ||||| | | ||| || ||| | Sbjct 51356 CCTTTCTGGGGTTTCTGCAAGGCTGCCCATGGATCATGGATTGTCACTTTGAAGTCCTCT 51415 Query 84546 CGTCCCCTGCACGATCGTTGCAGAGATTCGAAACTACCGGGTATCACTTTGAGAGCATCG 84605 || || ||||| || |||||||||| || |||||| || ||| | || | | ||| Sbjct 51416 CGGCCGCTGCAGGAACGTTGCAGAGCTTGGAAACTGCCTTCGATCTCCTTCAAACTGTCG 51475 Query 84606 TTTATTCCATTACCGCCGCAAATGGGTATGAAACCGTACAACAAGTGTGATAAATTTGGC 84665 || || |||| ||| |||||||| || ||||||||||||| | || | | |||||| Sbjct 51476 TTAATGCCATCACCTCCGCAAATTGGGATGAAACCGTACAGGAGATGCGTGAGATTTGGT 51535 Query 84666 AAGGGAACTTTGTCTACGGGAAAATTGCGCCCGTACACTCCCCATTCAACAAAATACGC 84724 | || | ||| || ||||| || | |||||| |||||||| || || || || Sbjct 51536 ACTGGGATACGGTCCACTGGAAACTTTCTGGGGTACACGCCCCATTCGACGAAGTAAGC 51594 >seq3664 Length=101255 Score = 113 bits (124), Expect = 3e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 ||||| || ||| | || || | || ||||||||||| || | ||| ||||| | Sbjct 93866 ATGCAGATCTTTGTGAAGACCCTGACAGGCAAAACCATCACACTCGAAGTAGAAGCTTCG 93925 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || || | | || | ||| |||||| || || || || |||| | |||| Sbjct 93926 GACACCATCGAGAATGTCAAGGCTAAAATTCAAGACAAGGAAGGCATACCCCCAGACCAG 93985 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 |||||||| ||||||||||| || ||||| |||||| || | |||| |||||| Sbjct 93986 CAGAGACTCATCTTTGCTGGAAAGCAACTTGAAGATGGCCGCACCCTCTCCGACTACAAT 94045 Query 22014 ATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGG 22060 || ||||||||||| |||||||| ||||||| ||| | |||||||| Sbjct 94046 ATCCAGAAGGAATCCACTCTTCACTTGGTATTGCGTCTCCGAGGAGG 94092 Score = 98.7 bits (108), Expect = 7e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 |||||||| ||| | || || | || || |||||||| || | ||| ||||| || Sbjct 95234 ATGCAAATCTTTGTGAAGACCCTGACAGGTAAAACCATCACACTCGAAGTAGAAGCTTCA 95293 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || || | | || | ||| |||||| ||||| || || | || | |||| Sbjct 95294 GACACCATTGAGAATGTCAAGGCTAAAATTCAAGATAAGGAAGGCATCCCCCCAGACCAG 95353 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 |||||||| ||||||||||| || ||||| |||||| ||| | |||| ||||| Sbjct 95354 CAGAGACTCATCTTTGCTGGAAAGCAACTTGAAGATGGCCGCACTCTCTCCGACTACAAC 95413 Query 22014 ATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGG 22060 || || || |||||||| || ||| ||||||| ||| | || || || Sbjct 95414 ATCCAAAAAGAATCTACCCTCCATCTGGTATTGCGTCTCCGCGGTGG 95460 Score = 86.0 bits (94), Expect = 4e-12 Identities = 86/112 (77%), Gaps = 0/112 (0%) Strand=Plus/Plus Query 21949 ACCAACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATT 22008 |||||||| || | ||||| ||||| |||||||| |||||| || | | |||| Sbjct 94665 ACCAACAGCGATTGATCTTCGCTGGAAAACAACTTGAAGATGGCCGTACCCTTTCTGATT 94724 Query 22009 ACAATATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGG 22060 ||||||| ||||| ||||| |||||||| ||||||| ||| | ||||| || Sbjct 94725 ACAATATCCAGAAAGAATCCACTCTTCACTTGGTATTGCGTCTCCGAGGCGG 94776 Score = 82.4 bits (90), Expect = 5e-11 Identities = 86/113 (76%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 21949 ACCAACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATT 22008 |||||||| || | ||||| ||||| |||||||| |||||| || | | |||| Sbjct 94893 ACCAACAGCGATTGATCTTCGCTGGAAAACAACTTGAAGATGGCCGTACCCTTTCTGATT 94952 Query 22009 ACAATATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGGA 22061 ||||||| ||||| ||||| |||||||| ||||||| ||| | || || ||| Sbjct 94953 ACAATATCCAGAAAGAATCCACTCTTCACTTGGTATTGCGTCTCCGCGGTGGA 95005 Score = 82.4 bits (90), Expect = 5e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 21833 AATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGC 21892 ||||||||| || | || || | || |||||||| || || | ||| || || | Sbjct 95689 AATGCAAATTTTCGTCAAGACCCTTACTGGCAAAACTATAACTCTTGAAGTCGAGGCTTC 95748 Query 21893 AGAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCA 21952 ||| || | | || | ||| || || || || ||||| | || | |||| Sbjct 95749 AGATACCATTGAAAATGTGAAGGCTAAGATCCAAGACAAGGAGGGCATTCCCCCAGACCA 95808 Query 21953 ACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAA 22012 |||| | | |||||||| || || || |||||||| || | | |||||||| Sbjct 95809 ACAGCGTTTGATCTTTGCCGGGAAGCAGCTAGAAGACGGTCGCACCCTTTCTGATTACAA 95868 Query 22013 TATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGG 22060 ||| ||||||||||| |||||||| ||||||| ||| | |||||||| Sbjct 95869 TATCCAGAAGGAATCCACTCTTCACTTGGTATTGCGTCTCCGAGGAGG 95916 >seq4530 Length=43051 Score = 105 bits (116), Expect = 5e-18 Identities = 163/229 (71%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 |||||||| || ||||||| |||| |||||||| || || ||||| || ||| | Sbjct 12320 ATGCAAATTTTCGTTAAAACTCTAACTGGCAAAACTATAACTTTGGAAGTTGAGGCCTCT 12261 Query 21894 GAAACGGTGGCCGATCTTAA--GCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACC 21951 || || | | || | ||| || |||| | |||||||| ||| | ||| | ||| Sbjct 12260 GACACTATTGA-GAACGTAAAAGCCAAAA-TCCAGGATAAAGAAGGTATTCCTCCAGACC 12203 Query 21952 AACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACA 22011 | ||||||||||| || |||||||| || ||||||||| | ||| | | || |||| Sbjct 12202 AGCAGAGACTTATTTTCGCTGGCAAGCAGCTAGAAGATGGACGCACTCTATCTGACTACA 12143 Query 22012 ATATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGG 22060 | |||||||| ||||| || ||||| |||| | ||| | || || || Sbjct 12142 ACATTCAGAAAGAATCAACCCTTCACTTGGTGCTGCGTCTGCGCGGTGG 12094 Score = 95.1 bits (104), Expect = 9e-15 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 ||||| || ||| | |||||| | || ||||| ||||| || | || || ||| | Sbjct 12092 ATGCAGATCTTTGTAAAAACACTGACTGGCAAGACCATCACTCTTGAGGTAGAGGCCTCC 12033 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || || | | || | || ||||| |||||||||||| | ||| | |||| Sbjct 12032 GATACAATTGAGAATGTAAAAGCCAAAATCCAAGATAAAGAGGGTATTCCTCCAGACCAG 11973 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 ||||||||||||||||||||||| || || |||||| | || | | || ||||| Sbjct 11972 CAGAGACTTATCTTTGCTGGCAAGCAGCTTGAAGATGGACGCACCTTATCGGACTACAAC 11913 Query 22014 ATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGG 22060 |||||||| || || || ||||| |||| | ||| | || || || Sbjct 11912 ATTCAGAAAGAGTCAACCCTTCACTTGGTGCTGCGTCTGCGCGGTGG 11866 Score = 89.7 bits (98), Expect = 4e-13 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 21927 GATAAAGAGGGTGTACCTGTAAACCAACAGAGACTTATCTTTGCTGGCAAACAACTAGAA 21986 || |||||||| | || | |||| ||||||||||||||||| || ||||| |||||| Sbjct 14052 GACAAAGAGGGCATTCCCCCAGACCAGCAGAGACTTATCTTTGCCGGAAAACAGCTAGAA 13993 Query 21987 GATTTAAAAACTATGGCCGATTACAATATTCAGAAGGAATCTACTCTTCATATGGTATTA 22046 ||| || || | || ||||| || ||||||||||||||||| || ||||| | Sbjct 13992 GATGGCCGCACACTGTCAGACTACAACATCCAGAAGGAATCTACTCTACACTTGGTACTG 13933 Query 22047 CGTTTACGAGGAGG 22060 ||| | || || || Sbjct 13932 CGTCTGCGTGGTGG 13919 >seq3481 Length=53562 Score = 96.9 bits (106), Expect = 2e-15 Identities = 160/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 21830 CAAAATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGC 21889 ||||||||| || || | ||||| |||| || || ||||| ||| | || ||| || Sbjct 24048 CAAAATGCAGATTTTCGTCAAAACCCTAACCGGGAAGACCATCACCCTTGAGGTGGAGGC 24107 Query 21890 CGCAGAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAA 21949 | | || || | | | | ||| || ||| ||||| |||||| | || | Sbjct 24108 CTCGGACACCATTGAGAACGTGAAGGCCAAGATTCAGGATAAGGAGGGTATTCCGCCGGA 24167 Query 21950 CCAACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTA 22009 ||| ||| | || ||||| || |||||||| || |||||| || || ||||||| Sbjct 24168 CCAGCAGCGTCTCATCTTCGCCGGCAAACAGCTGGAAGATGGCCGCACCCTGTCCGATTA 24227 Query 22010 CAATATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGG 22060 |||||| |||||||||||||||||||| |||| | | || ||||||| Sbjct 24228 CAATATCCAGAAGGAATCTACTCTTCACTTGGTGCTCAGGCTAAGAGGAGG 24278 >seq3754 Length=50117 Score = 86.0 bits (94), Expect = 4e-12 Identities = 86/112 (77%), Gaps = 0/112 (0%) Strand=Plus/Plus Query 21949 ACCAACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATT 22008 |||||||| || | ||||| ||||| |||||||| |||||| || | | |||| Sbjct 203 ACCAACAGCGATTGATCTTCGCTGGAAAACAACTTGAAGATGGCCGTACCCTTTCTGATT 262 Query 22009 ACAATATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGG 22060 ||||||| ||||| ||||| |||||||| ||||||| ||| | ||||| || Sbjct 263 ACAATATCCAGAAAGAATCCACTCTTCACTTGGTATTGCGTCTCCGAGGCGG 314 Score = 82.4 bits (90), Expect = 5e-11 Identities = 86/113 (76%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 21949 ACCAACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATT 22008 |||||||| || | ||||| ||||| |||||||| |||||| || | | |||| Sbjct 431 ACCAACAGCGATTGATCTTCGCTGGAAAACAACTTGAAGATGGCCGTACCCTTTCTGATT 490 Query 22009 ACAATATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGGA 22061 ||||||| ||||| ||||| |||||||| ||||||| ||| | || || ||| Sbjct 491 ACAATATCCAGAAAGAATCCACTCTTCACTTGGTATTGCGTCTCCGCGGTGGA 543 Score = 82.4 bits (90), Expect = 5e-11 Identities = 86/113 (76%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 21949 ACCAACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATT 22008 |||||||| || | ||||| ||||| |||||||| |||||| || | | |||| Sbjct 1115 ACCAACAGCGATTGATCTTCGCTGGAAAACAACTTGAAGATGGCCGTACCCTTTCTGATT 1174 Query 22009 ACAATATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGGA 22061 ||||||| ||||| ||||| |||||||| ||||||| ||| | || || ||| Sbjct 1175 ACAATATCCAGAAAGAATCCACTCTTCACTTGGTATTGCGTCTCCGCGGTGGA 1227 Score = 82.4 bits (90), Expect = 5e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 21833 AATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGC 21892 ||||||||| || | || || | || |||||||| || || | ||| || || | Sbjct 1227 AATGCAAATTTTCGTCAAGACCCTTACTGGCAAAACTATAACTCTTGAAGTCGAGGCTTC 1286 Query 21893 AGAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCA 21952 ||| || | | || | ||| || || || || ||||| | || | |||| Sbjct 1287 AGATACCATTGAAAATGTGAAGGCTAAGATCCAAGACAAGGAGGGCATTCCCCCAGACCA 1346 Query 21953 ACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAA 22012 |||| | | |||||||| || || || |||||||| || | | |||||||| Sbjct 1347 ACAGCGTTTGATCTTTGCCGGGAAGCAGCTAGAAGACGGTCGCACCCTTTCTGATTACAA 1406 Query 22013 TATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGG 22060 ||| ||||||||||| |||||||| ||||||| ||| | |||||||| Sbjct 1407 TATCCAGAAGGAATCCACTCTTCACTTGGTATTGCGTCTCCGAGGAGG 1454 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 358012187768554