Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Operophtera_20brumata_20[genbank_20GCA_5F001266575.1_202015-08-11] 25,801 sequences; 638,207,720 total letters Query= NC_008837.1 Length=1533 Score E Sequences producing significant alignments: (Bits) Value seq9855 123 2e-25 seq6422 123 2e-25 seq2447 111 2e-21 >seq9855 Length=15086 Score = 123 bits (136), Expect = 2e-25 Identities = 88/101 (87%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 110 AGATTTACTATAGCTCTACGTTATTTCACGTGGCTGTGGTCTTTTATATTTAACTCTTTA 169 ||| |||| ||||||||| ||||||| |||||||||||| |||||||| |||||||||| Sbjct 3240 AGACTTACCATAGCTCTATATTATTTCCCGTGGCTGTGGTATTTTATATGTAACTCTTTA 3181 Query 170 AATAAGTTTAAATATCTTAACGAGGCATATATAGGATATAG 210 ||||||||| ||||||||| |||| ||| |||| |||||| Sbjct 3180 CATAAGTTTATATATCTTAAAGAGGTATAAATAGCATATAG 3140 >seq6422 Length=30189 Score = 123 bits (136), Expect = 2e-25 Identities = 88/101 (87%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 110 AGATTTACTATAGCTCTACGTTATTTCACGTGGCTGTGGTCTTTTATATTTAACTCTTTA 169 ||| |||| ||||||||| ||||||| |||||||||||| |||||||| |||||||||| Sbjct 21224 AGACTTACCATAGCTCTATATTATTTCCCGTGGCTGTGGTATTTTATATGTAACTCTTTA 21165 Query 170 AATAAGTTTAAATATCTTAACGAGGCATATATAGGATATAG 210 ||||||||| ||||||||| |||| ||| |||| |||||| Sbjct 21164 CATAAGTTTATATATCTTAAAGAGGTATAAATAGCATATAG 21124 >seq2447 Length=64305 Score = 111 bits (122), Expect = 2e-21 Identities = 85/101 (84%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 110 AGATTTACTATAGCTCTACGTTATTTCACGTGGCTGTGGTCTTTTATATTTAACTCTTTA 169 |||||| ||||||||||| ||||| ||||||||||| ||||||| ||||||||| Sbjct 3149 AGATTTGCTATAGCTCTATACGATTTCTTGTGGCTGTGGTTATTTATATCAAACTCTTTA 3208 Query 170 AATAAGTTTAAATATCTTAACGAGGCATATATAGGATATAG 210 |||||||||| ||||||||| |||| ||| |||||| |||| Sbjct 3209 AATAAGTTTATATATCTTAAAGAGGTATAAATAGGAAATAG 3249 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4795485026234