Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Operophtera_20brumata_20[genbank_20GCA_5F001266575.1_202015-08-11]
25,801 sequences; 638,207,720 total letters
Query= NC_008838.1
Length=1657
Score E
Sequences producing significant alignments: (Bits) Value
seq6422 172 6e-40
seq9855 167 2e-38
seq2447 150 2e-33
seq1896 118 1e-23
seq171 93.3 4e-16
seq1668 84.2 2e-13
>seq6422
Length=30189
Score = 172 bits (190), Expect = 6e-40
Identities = 143/171 (84%), Gaps = 3/171 (2%)
Strand=Plus/Plus
Query 1 TTCCTATAGCCTCTACTGGCTTTACC-TATAGCAATATATTTCTAGCTCTATAACTAGTC 59
||| |||| | | || ||||| | || |||||||||| |||||||||| | || || |
Sbjct 21065 TTCATATAACTTTTATTGGCTATGCCCTATAGCAATACATTTCTAGCTGT-TAGCTTATA 21123
Query 60 CTATATATTATTTTTACCTCTTTAAGATAAATAAACTTATTTAAAGAGTTAAATATAAAA 119
|||||| ||||| ||||||||||||||| |||||||||| |||||||||| ||||||||
Sbjct 21124 CTATATGCTATTTATACCTCTTTAAGATATATAAACTTATGTAAAGAGTTACATATAAAA 21183
Query 120 TACCACAGCCACGAGAAATCGTATAAAGCTATGGTAGGTCTAGGA-TAGAA 169
||||||||||||| ||||| |||| |||||||||| |||||| | |||||
Sbjct 21184 TACCACAGCCACGGGAAATAATATAGAGCTATGGTAAGTCTAGTACTAGAA 21234
>seq9855
Length=15086
Score = 167 bits (184), Expect = 2e-38
Identities = 142/171 (83%), Gaps = 3/171 (2%)
Strand=Plus/Plus
Query 1 TTCCTATAGCCTCTACTGGCTTTACC-TATAGCAATATATTTCTAGCTCTATAACTAGTC 59
||| |||| | | || ||||| | || |||||||||| |||||||||| | || ||
Sbjct 3081 TTCATATAACTTTTATTGGCTATGCCCTATAGCAATACATTTCTAGCTGT-TAGCTTACA 3139
Query 60 CTATATATTATTTTTACCTCTTTAAGATAAATAAACTTATTTAAAGAGTTAAATATAAAA 119
|||||| ||||| ||||||||||||||| |||||||||| |||||||||| ||||||||
Sbjct 3140 CTATATGCTATTTATACCTCTTTAAGATATATAAACTTATGTAAAGAGTTACATATAAAA 3199
Query 120 TACCACAGCCACGAGAAATCGTATAAAGCTATGGTAGGTCTAGGA-TAGAA 169
||||||||||||| ||||| |||| |||||||||| |||||| | |||||
Sbjct 3200 TACCACAGCCACGGGAAATAATATAGAGCTATGGTAAGTCTAGTACTAGAA 3250
>seq2447
Length=64305
Score = 150 bits (166), Expect = 2e-33
Identities = 115/136 (85%), Gaps = 0/136 (0%)
Strand=Plus/Minus
Query 33 AATATATTTCTAGCTCTATAACTAGTCCTATATATTATTTTTACCTCTTTAAGATAAATA 92
|||| ||||||| || |||| ||||| |||| | ||||| ||||||||||||||| |||
Sbjct 3276 AATACATTTCTAACTATATAGCTAGTTCTATTTCCTATTTATACCTCTTTAAGATATATA 3217
Query 93 AACTTATTTAAAGAGTTAAATATAAAATACCACAGCCACGAGAAATCGTATAAAGCTATG 152
||||||||||||||||| ||||||| ||||||||||| |||||||||||| ||||||
Sbjct 3216 AACTTATTTAAAGAGTTTGATATAAATAACCACAGCCACAAGAAATCGTATAGAGCTATA 3157
Query 153 GTAGGTCTAGGATAGA 168
| | ||||| |||||
Sbjct 3156 GCAAATCTAGAATAGA 3141
>seq1896
Length=105120
Score = 118 bits (130), Expect = 1e-23
Identities = 124/162 (77%), Gaps = 12/162 (7%)
Strand=Plus/Plus
Query 14 TACTGGCTTTACCTATAGCAATATATTTCTAGCTCTATAACTAGTCCTATATAT-TATTT 72
|| |||| ||| |||||||||| |||| ||| ||| || ||||| ||||| |||||
Sbjct 45618 TAATGGCATTAACTATAGCAATTTATTATTAGGTCTCTAGCTAGTGCTATAACCCTATTT 45677
Query 73 TTACCTCTTTAAGATAAA----TAAACTTATTTAAAGAGTTAAATATAAAATACCACAGC 128
| || ||| |||||| | |||| ||||||||| ||||||||||||||||
Sbjct 45678 ATTCCCCTTCAAGATATAAGTATAAAATTATTTAAAC-------TATAAAATACCACAGC 45730
Query 129 CACGAGAAATCGTATAAAGCTATGGTAGGTCTAGGATAGAAA 170
||| |||||| ||||||||||| ||| |||||||||||||
Sbjct 45731 CACAAGAAATTATATAAAGCTATAGTAAATCTAGGATAGAAA 45772
>seq171
Length=184467
Score = 93.3 bits (102), Expect = 4e-16
Identities = 117/157 (75%), Gaps = 14/157 (9%)
Strand=Plus/Minus
Query 23 TACCTATAGCAATATATTTCTAGCTCTATAAC---TAGTCCTATATAT-TATTTTTACCT 78
|||||||||||||||||| | || ||||||| | || ||||| ||||| |||||
Sbjct 158932 TACCTATAGCAATATATTACCAGTTCTATAATAGTTGGTGCTATAACCCTATTTATACCT 158873
Query 79 CTTTAAGATAAA--TAAACTTATTTAAAGAGTTAAATATAAAATACCACAGCCACGAGAA 136
||| | |||| | || || | |||| || ||||||||||||||||||| ||||
Sbjct 158872 CTTCAGGATATAAGTATACAATTATAAA-----AACTATAAAATACCACAGCCACAAGAA 158818
Query 137 ATC---GTATAAAGCTATGGTAGGTCTAGGATAGAAA 170
||| ||| ||||||| || |||||||||||||
Sbjct 158817 ATCATATTATGAAGCTATATTAAATCTAGGATAGAAA 158781
>seq1668
Length=82418
Score = 84.2 bits (92), Expect = 2e-13
Identities = 79/101 (78%), Gaps = 11/101 (11%)
Strand=Plus/Minus
Query 74 TACCTCTTTAAGATAAA----TAAACTTATTTAAAGAGTTAAATATAAAATACCACAGCC 129
|||||||| |||||| | |||| ||||| ||| |||||||||||||| ||
Sbjct 67450 TACCTCTTCAAGATATAAGTATAAAATTATTAAAAC-------TATAAAATACCACACCC 67398
Query 130 ACGAGAAATCGTATAAAGCTATGGTAGGTCTAGGATAGAAA 170
|| ||||||| ||||||||||| ||| |||||||||||||
Sbjct 67397 ACAAGAAATCATATAAAGCTATAGTAAATCTAGGATAGAAA 67357
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 5192176249218
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |