Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Operophtera_20brumata_20[genbank_20GCA_5F001266575.1_202015-08-11]
25,801 sequences; 638,207,720 total letters
Query= NC_008841.1
Length=1916
Score E
Sequences producing significant alignments: (Bits) Value
seq1896 111 2e-21
seq16437 86.0 8e-14
seq171 78.8 1e-11
>seq1896
Length=105120
Score = 111 bits (122), Expect = 2e-21
Identities = 123/163 (75%), Gaps = 12/163 (7%)
Strand=Plus/Minus
Query 554 ATTACTATCCTAGATTTATTATAGCTTAATATAATTTGCCGTGGCTTTGGtattttatat 613
||| |||||||||||||| |||||||| ||||||||| |||||| ||||||||||||
Sbjct 45773 ATTTCTATCCTAGATTTACTATAGCTTTATATAATTTCTTGTGGCTGTGGTATTTTATA- 45715
Query 614 ataactctttaaataaattta----tatatcttaaagaggtataaatagtaatataaGAC 669
||||||||| |||| |||||||| ||| || |||||||| |||| ||
Sbjct 45714 ------GTTTAAATAATTTTATACTTATATCTTGAAGGGGAATAAATAGGGTTATAGCAC 45661
Query 670 TAGCTATAGAGCTAGAAGATGTATAGCTGTAGATAAAGACATT 712
|||||| ||| ||| | || || ||| ||| ||| | ||||
Sbjct 45660 TAGCTAGAGACCTA-ATAATAAATTGCTATAGTTAATGCCATT 45619
>seq16437
Length=3918
Score = 86.0 bits (94), Expect = 8e-14
Identities = 119/159 (75%), Gaps = 21/159 (13%)
Strand=Plus/Minus
Query 635 tatatcttaaagaggtataaatagtaatataaGACTAGCTATAGAGCTAGAAGATGTAT- 693
|||||||||||||||||||||||| || ||| |||||||||| || ||||| ||||||
Sbjct 1163 TATATCTTAAAGAGGTATAAATAGGAA-ATAGAACTAGCTATATAGTTAGAA-ATGTATT 1106
Query 694 ------AGCTGTAG--ATAAAGACATTGAGTATTTAATAAAGGTATAGTATGAAAATAAG 745
||| |||| ||||| || |||| | |||| |||||| || |||||
Sbjct 1105 ATAATAAGC-GTAGTCATAAAAGTAT--AGTAAATTATAA-----TAGTAT-AATATAAG 1055
Query 746 CTGAGGTAAGACTGGAATTACCCACCACACCCGCCACAC 784
||||||| ||||||| ||||| || |||| || ||||
Sbjct 1054 CTGAGGTTGGACTGGATATACCCGCC-CACCTGCTACAC 1017
>seq171
Length=184467
Score = 78.8 bits (86), Expect = 1e-11
Identities = 113/156 (72%), Gaps = 10/156 (6%)
Strand=Plus/Plus
Query 555 TTACTATCCTAGATTTATTATAGCT---TAATATAATTTGCCGTGGCTTTGGtattttat 611
|| |||||||||||||| ||||||| |||||| |||| |||||| |||||||||||
Sbjct 158781 TTTCTATCCTAGATTTAATATAGCTTCATAATATGATTTCTTGTGGCTGTGGTATTTTAT 158840
Query 612 atataactctttaaataaatttatatatcttaaagaggtataaatagtaatataaGACTA 671
| | | | ||| | || |||||| | ||||||||||||||| |||| || |
Sbjct 158841 AGTT---TTTATAATTGTATACTTATATCCTGAAGAGGTATAAATAGGGTTATAGCACCA 158897
Query 672 GC---TATAGAGCTAGAAGATGTATAGCTGTAGATA 704
| |||||| || | | || ||| ||| ||| ||
Sbjct 158898 ACTATTATAGAACTGGTA-ATATATTGCTATAGGTA 158932
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 6020749045612
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |