Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Operophtera_20brumata_20[genbank_20GCA_5F001266575.1_202015-08-11] 25,801 sequences; 638,207,720 total letters Query= NC_008842.1 Length=1940 Score E Sequences producing significant alignments: (Bits) Value seq2536 84.2 3e-13 >seq2536 Length=66406 Score = 84.2 bits (92), Expect = 3e-13 Identities = 173/254 (68%), Gaps = 15/254 (6%) Strand=Plus/Plus Query 381 TCCCATGCTGGGATCATTCGCGTGTGATATTGTCAGAGTCTGATGATTTTGTGTCTGCCA 440 |||||||||||||| |||| ||||||| || ||| || | ||| || Sbjct 61966 TCCCATGCTGGGATTATTCCCGTGTGAAGTTATCAAGATCGAAC---------TCTACCC 62016 Query 441 ATGCATCGGACTACATCCACGCAAATTATGTGCGCAGTTTGAGAAGGGACAAG-ATCTCA 499 | |||||||||||| | || ||||| ||| | | | | ||| | ||| | ||| Sbjct 62017 A---ATCGGACTACATTAATGCCAATTACGTGAACGGCTGGGAAAGTCAGAAGAAATTCA 62073 Query 500 TCGCTACCCAAGCGGCCCATGGACGAAACGATCGATGATTTTTTCGACATGATCACGCAG 559 ||||||| |||| || || || ||||| ||||| |||| |||||| | |||| Sbjct 62074 TCGCTACTTAAGC-ACCGTTGTACTGGACGATGGATGACTTTTGGGACATG-TTTGGCAG 62131 Query 560 CAAAATTCCCGAATCATCGTGGTGTTGACCAAGATCATTGAGAACAACGAGGAGAAATGT 619 | | | ||| |||||||| ||||| || |||| ||| |||| || ||||||| Sbjct 62132 AATGAGAGCGAAATTATCGTGGTATTGACAAATATCAAAGAGGACAATAAGCAGAAATGA 62191 Query 620 TATCCATATTGGTC 633 ||||| |||||||| Sbjct 62192 TATCCTTATTGGTC 62205 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6097527991996