Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Operophtera_20brumata_20[genbank_20GCA_5F001266575.1_202015-08-11]
25,801 sequences; 638,207,720 total letters
Query= NC_008848.1
Length=2066
Score E
Sequences producing significant alignments: (Bits) Value
seq2447 145 1e-31
seq9855 140 4e-30
seq6422 136 5e-29
seq1896 77.0 4e-11
>seq2447
Length=64305
Score = 145 bits (160), Expect = 1e-31
Identities = 126/155 (81%), Gaps = 1/155 (1%)
Strand=Plus/Minus
Query 952 ATAATAATATACTCCTAGCCTTATAGCTAGAGTGATATCCTATTTATAACTCTTTAAGAT 1011
|| |||||| | | ||| | ||||||||| || ||||||||||| |||||||||||
Sbjct 3281 ATTATAATACATTTCTAACTATATAGCTAGTTCTATTTCCTATTTATACCTCTTTAAGAT 3222
Query 1012 AAATTAACTTATTTAAAGAGTTGGATATAAAATACCACAGCCACGAGAAATCTTTTAATG 1071
| || ||||||||||||||||| |||||||| ||||||||||| ||||||| | || |
Sbjct 3221 ATATAAACTTATTTAAAGAGTTTGATATAAATAACCACAGCCACAAGAAATCGTATAGAG 3162
Query 1072 CTATAGCAAATTAAGGATAGGAAATGGTCAGCCAC 1106
||||||||||| || ||| || |||||| |||||
Sbjct 3161 CTATAGCAAATCTAGAATA-GAGATGGTCCGCCAC 3128
>seq9855
Length=15086
Score = 140 bits (154), Expect = 4e-30
Identities = 241/336 (72%), Gaps = 13/336 (4%)
Strand=Plus/Plus
Query 789 ATTGGATTCCTTTCACCAAGATGAGTCCAACGAGCCC-TCATCCATCTTGGAATACCTGC 847
|| |||||||| | ||||| || ||||||| | || | || | | ||| || |
Sbjct 2945 ATCGGATTCCTCGCGTCAAGACGAATCCAACGGGTCCATGGTCGACCAAA-AATGGCTAC 3003
Query 848 GGGAAGTGCCTGAGTGGCCAT--GTGGCGGGTGTGGCAGGC-ATTTCCTATCCTACTTTA 904
|||||| || || ||| || |||||||||||||||| | | || ||| || | |
Sbjct 3004 TGGAAGTCCCCGATTGGAAATTGGTGGCGGGTGTGGCAGCCCAGATC--ATCACACCTCA 3061
Query 905 GCTTACGCTCATACCATGCCTTAAAATAGCCTCTAGTGCCTTAACAC-ATAATAATATAC 963
||||| ||| |||| || || | ||| | | || || || | | ||| |||| |
Sbjct 3062 GCTTATGCT-ATACTATATTTTCATATAACTTTTATTGGCTATGCCCTATAGCAATACAT 3120
Query 964 TCCTAGCCTTATAGCT-AGAGTGATATCCTATTTATAACTCTTTAAGATAAATTAACTTA 1022
| ||||| | ||||| | | | |||| ||||||||| |||||||||||| || ||||||
Sbjct 3121 TTCTAGCTGT-TAGCTTACACT-ATATGCTATTTATACCTCTTTAAGATATATAAACTTA 3178
Query 1023 TTTAAAGAGTTGGATATAAAATACCACAGCCACGAGAAATCTTTTAATGCTATAGCAAAT 1082
| ||||||||| ||||||||||||||||||||| ||||| | || ||||| | || |
Sbjct 3179 TGTAAAGAGTTACATATAAAATACCACAGCCACGGGAAATAATATAGAGCTATGGTAAGT 3238
Query 1083 TAAGGATAGGAAATGGTCAGCCACGGTCGCCACATC 1118
|| | ||| ||| |||||||| | ||||||||
Sbjct 3239 CTAGTACTAGAATTGG-CAGCCACGTTTGCCACATC 3273
>seq6422
Length=30189
Score = 136 bits (150), Expect = 5e-29
Identities = 240/336 (71%), Gaps = 13/336 (4%)
Strand=Plus/Plus
Query 789 ATTGGATTCCTTTCACCAAGATGAGTCCAACGAGCCC-TCATCCATCTTGGAATACCTGC 847
|| |||||||| | ||||| || ||||||| | || | || | | ||| || |
Sbjct 20929 ATCGGATTCCTCGCGTCAAGACGAATCCAACGGGTCCATGGTCGACCAAA-AATGGCTAC 20987
Query 848 GGGAAGTGCCTGAGTGGCCAT--GTGGCGGGTGTGGCAGGC-ATTTCCTATCCTACTTTA 904
|||||| || || ||| || |||||||||||||||| | | || | || || | |
Sbjct 20988 TGGAAGTCCCCGATTGGAAATTGGTGGCGGGTGTGGCAGCCCAGATCATCTC--ACCTCA 21045
Query 905 GCTTACGCTCATACCATGCCTTAAAATAGCCTCTAGTGCCTTAACAC-ATAATAATATAC 963
||||| ||| |||| || || | ||| | | || || || | | ||| |||| |
Sbjct 21046 GCTTATGCT-ATACTATATTTTCATATAACTTTTATTGGCTATGCCCTATAGCAATACAT 21104
Query 964 TCCTAGCCTTATAGCT-AGAGTGATATCCTATTTATAACTCTTTAAGATAAATTAACTTA 1022
| ||||| | ||||| | | | |||| ||||||||| |||||||||||| || ||||||
Sbjct 21105 TTCTAGCTGT-TAGCTTATACT-ATATGCTATTTATACCTCTTTAAGATATATAAACTTA 21162
Query 1023 TTTAAAGAGTTGGATATAAAATACCACAGCCACGAGAAATCTTTTAATGCTATAGCAAAT 1082
| ||||||||| ||||||||||||||||||||| ||||| | || ||||| | || |
Sbjct 21163 TGTAAAGAGTTACATATAAAATACCACAGCCACGGGAAATAATATAGAGCTATGGTAAGT 21222
Query 1083 TAAGGATAGGAAATGGTCAGCCACGGTCGCCACATC 1118
|| | ||| ||| |||||||| | |||||||
Sbjct 21223 CTAGTACTAGAATTGG-CAGCCACGTTTACCACATC 21257
>seq1896
Length=105120
Score = 77.0 bits (84), Expect = 4e-11
Identities = 97/131 (74%), Gaps = 13/131 (10%)
Strand=Plus/Plus
Query 975 TAGCTAGAGTGATATCC-TATTTATAACTCTTTAAGATAAA----TTAACTTATTTAAAG 1029
||||||| | ||| || ||||||| | ||| |||||| | | || |||||||||
Sbjct 45655 TAGCTAGTGCTATAACCCTATTTATTCCCCTTCAAGATATAAGTATAAAATTATTTAAAC 45714
Query 1030 AGTTGGATATAAAATACCACAGCCACGAGAAATCTTTTAATGCTATAGCAAATTAAGGAT 1089
||||||||||||||||||| |||||| | ||| ||||||| |||| |||||
Sbjct 45715 -------TATAAAATACCACAGCCACAAGAAATTATATAAAGCTATAGTAAATCTAGGAT 45767
Query 1090 AGGAAATGGTC 1100
| |||||| ||
Sbjct 45768 A-GAAATGATC 45777
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 6500617460512
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |