Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Operophtera_20brumata_20[genbank_20GCA_5F001266575.1_202015-08-11]
25,801 sequences; 638,207,720 total letters
Query= NC_008856.1
Length=2195
Score E
Sequences producing significant alignments: (Bits) Value
seq6422 107 3e-20
seq9855 104 3e-19
seq2447 102 1e-18
>seq6422
Length=30189
Score = 107 bits (118), Expect = 3e-20
Identities = 164/234 (70%), Gaps = 8/234 (3%)
Strand=Plus/Plus
Query 16 GTGGCGGATGTGGCAGCCATTACCAGTCT-ATCTCGGCTTATGCCTATATACGTAATAAT 74
||||||| |||||||||| | || ||| | ||| |||||||| ||||| || |
Sbjct 21011 GTGGCGGGTGTGGCAGCCCAGATCA-TCTCACCTCAGCTTATGC---TATACTATATTTT 21066
Query 75 CATATAGCCTTTAACGGCTATGCC-TATAGCTATATATTTNNNNNNNNNNNNNNNNNNNN 133
|||||| | |||| ||||||||| |||||| ||| ||||
Sbjct 21067 CATATAACTTTTATTGGCTATGCCCTATAGCAATACATTTCTAGCTGTTAGCTTATACTA 21126
Query 134 NNNTTATATTTATACCTCTTTAAGAAATATTATATTCTTTAAAGAGTTATTAATAAAAGA 193
| ||||||||||||||||||| |||| | || | |||||||||| |||||| |
Sbjct 21127 TA-TGCTATTTATACCTCTTTAAGATATATAAACTTATGTAAAGAGTTACATATAAAATA 21185
Query 194 CCACAGCCACGTGAAATACTATAGATTTATATTAAATCTAGGA-TAGAGATGGC 246
||||||||||| |||||| |||||| ||| ||| ||||| | |||| ||||
Sbjct 21186 CCACAGCCACGGGAAATAATATAGAGCTATGGTAAGTCTAGTACTAGAATTGGC 21239
>seq9855
Length=15086
Score = 104 bits (114), Expect = 3e-19
Identities = 161/233 (69%), Gaps = 6/233 (3%)
Strand=Plus/Plus
Query 16 GTGGCGGATGTGGCAGCCATTACCAGTCTATCTCGGCTTATGCCTATATACGTAATAATC 75
||||||| |||||||||| | || | ||| |||||||| ||||| || ||
Sbjct 3027 GTGGCGGGTGTGGCAGCCCAGATCATCACACCTCAGCTTATGC---TATACTATATTTTC 3083
Query 76 ATATAGCCTTTAACGGCTATGCC-TATAGCTATATATTTNNNNNNNNNNNNNNNNNNNNN 134
||||| | |||| ||||||||| |||||| ||| ||||
Sbjct 3084 ATATAACTTTTATTGGCTATGCCCTATAGCAATACATTTCTAGCTGTTAGCTTACACTAT 3143
Query 135 NNTTATATTTATACCTCTTTAAGAAATATTATATTCTTTAAAGAGTTATTAATAAAAGAC 194
| ||||||||||||||||||| |||| | || | |||||||||| |||||| ||
Sbjct 3144 A-TGCTATTTATACCTCTTTAAGATATATAAACTTATGTAAAGAGTTACATATAAAATAC 3202
Query 195 CACAGCCACGTGAAATACTATAGATTTATATTAAATCTAGGA-TAGAGATGGC 246
|||||||||| |||||| |||||| ||| ||| ||||| | |||| ||||
Sbjct 3203 CACAGCCACGGGAAATAATATAGAGCTATGGTAAGTCTAGTACTAGAATTGGC 3255
>seq2447
Length=64305
Score = 102 bits (112), Expect = 1e-18
Identities = 86/106 (81%), Gaps = 0/106 (0%)
Strand=Plus/Minus
Query 140 TATTTATACCTCTTTAAGAAATATTATATTCTTTAAAGAGTTATTAATAAAAGACCACAG 199
||||||||||||||||||| |||| | || ||||||||||| ||||| |||||||
Sbjct 3241 TATTTATACCTCTTTAAGATATATAAACTTATTTAAAGAGTTTGATATAAATAACCACAG 3182
Query 200 CCACGTGAAATACTATAGATTTATATTAAATCTAGGATAGAGATGG 245
|||| ||||| |||||| |||| |||||||| ||||||||||
Sbjct 3181 CCACAAGAAATCGTATAGAGCTATAGCAAATCTAGAATAGAGATGG 3136
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 6913304297326
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |