Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Operophtera_20brumata_20[genbank_20GCA_5F001266575.1_202015-08-11]
25,801 sequences; 638,207,720 total letters
Query= NC_008857.1
Length=2199
Score E
Sequences producing significant alignments: (Bits) Value
seq9855 161 1e-36
seq6422 161 1e-36
>seq9855
Length=15086
Score = 161 bits (178), Expect = 1e-36
Identities = 247/354 (70%), Gaps = 29/354 (8%)
Strand=Plus/Plus
Query 1229 ATTGGATTCTCCTCGTTGAGACATTTTCAACGAGTCCATGTCCGACTCAAAATGGCCGCG 1288
|| |||||| | ||| |||| | ||||| ||||||| |||| |||||||| |
Sbjct 2945 ATCGGATTCCTCGCGTCAAGACGAATCCAACGGGTCCATGGTCGACCAAAAATGGCTACT 3004
Query 1289 CCAAGTGCCCATTTGGCGAT--GTGGCGGGTGTGGCGGGTTTTTTCCAATCCCACCTTAG 1346
|||| ||| |||| || |||||||||||||| | || ||| ||||| ||
Sbjct 3005 GGAAGTCCCCGATTGGAAATTGGTGGCGGGTGTGGCAGCCCAGATC--ATCACACCTCAG 3062
Query 1347 CTCATGCTTATACTATATACTTATACTTAGNNNNNNNNNNNNTACATATAGCTTATAGTG 1406
|| ||||| ||||||||| | |||||| ||| || ||
Sbjct 3063 CTTATGCT-ATACTATAT-----------------------TTTCATATAACTTTTATTG 3098
Query 1407 TCCATGCTCAATAGCATCatattcctagttatatagcttatgctatattatatttatacc 1466
| |||| | |||||| | ||| |||| | | ||||||| |||||| ||||||||||
Sbjct 3099 GCTATGCCCTATAGCAATACATTTCTAGCTGT-TAGCTTACACTATATGCTATTTATACC 3157
Query 1467 tctttaaaaaatatataattattaaaagagttatatataaaaTGACACAGCCACCGGAAA 1526
||||||| | ||||| | |||| ||||||||| ||||||||| ||||||||| |||||
Sbjct 3158 TCTTTAAGATATATAAACTTATGTAAAGAGTTACATATAAAATACCACAGCCACGGGAAA 3217
Query 1527 TAATATTACGCTATTGTTAATCTAGAATTGAAATTGGCGGCCATGCTCGCCACA 1580
|||||| ||||| || | ||||| | | ||||||| |||| | | ||||||
Sbjct 3218 TAATATAGAGCTATGGTAAGTCTAGTACTAGAATTGGCAGCCACGTTTGCCACA 3271
>seq6422
Length=30189
Score = 161 bits (178), Expect = 1e-36
Identities = 247/354 (70%), Gaps = 29/354 (8%)
Strand=Plus/Plus
Query 1229 ATTGGATTCTCCTCGTTGAGACATTTTCAACGAGTCCATGTCCGACTCAAAATGGCCGCG 1288
|| |||||| | ||| |||| | ||||| ||||||| |||| |||||||| |
Sbjct 20929 ATCGGATTCCTCGCGTCAAGACGAATCCAACGGGTCCATGGTCGACCAAAAATGGCTACT 20988
Query 1289 CCAAGTGCCCATTTGGCGAT--GTGGCGGGTGTGGCGGGTTTTTTCCAATCCCACCTTAG 1346
|||| ||| |||| || |||||||||||||| | || ||| ||||| ||
Sbjct 20989 GGAAGTCCCCGATTGGAAATTGGTGGCGGGTGTGGCAGCCCAGATC--ATCTCACCTCAG 21046
Query 1347 CTCATGCTTATACTATATACTTATACTTAGNNNNNNNNNNNNTACATATAGCTTATAGTG 1406
|| ||||| ||||||||| | |||||| ||| || ||
Sbjct 21047 CTTATGCT-ATACTATAT-----------------------TTTCATATAACTTTTATTG 21082
Query 1407 TCCATGCTCAATAGCATCatattcctagttatatagcttatgctatattatatttatacc 1466
| |||| | |||||| | ||| |||| | | |||||||| |||||| ||||||||||
Sbjct 21083 GCTATGCCCTATAGCAATACATTTCTAGCTGT-TAGCTTATACTATATGCTATTTATACC 21141
Query 1467 tctttaaaaaatatataattattaaaagagttatatataaaaTGACACAGCCACCGGAAA 1526
||||||| | ||||| | |||| ||||||||| ||||||||| ||||||||| |||||
Sbjct 21142 TCTTTAAGATATATAAACTTATGTAAAGAGTTACATATAAAATACCACAGCCACGGGAAA 21201
Query 1527 TAATATTACGCTATTGTTAATCTAGAATTGAAATTGGCGGCCATGCTCGCCACA 1580
|||||| ||||| || | ||||| | | ||||||| |||| | | |||||
Sbjct 21202 TAATATAGAGCTATGGTAAGTCTAGTACTAGAATTGGCAGCCACGTTTACCACA 21255
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 6926100788390
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |