Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Operophtera_20brumata_20[genbank_20GCA_5F001266575.1_202015-08-11] 25,801 sequences; 638,207,720 total letters Query= NC_008860.1 Length=2285 Score E Sequences producing significant alignments: (Bits) Value seq9855 95.1 2e-16 seq6422 95.1 2e-16 seq2447 80.6 4e-12 >seq9855 Length=15086 Score = 95.1 bits (104), Expect = 2e-16 Identities = 84/100 (84%), Gaps = 4/100 (4%) Strand=Plus/Plus Query 118 CCTCTTTAAGATATATTATACTT-TATAAAGAGTTACATATAAAATACCACAGCCACGAG 176 ||||||||||||||| || |||| | |||||||||||||||||||||||||||||||| | Sbjct 3156 CCTCTTTAAGATATA-TAAACTTATGTAAAGAGTTACATATAAAATACCACAGCCACGGG 3214 Query 177 AAATAATGAAGTTCTATAGAAAATTTAGGA-TAGCAATTG 215 ||||||| || |||| | || | ||| | ||| ||||| Sbjct 3215 AAATAATATAGAGCTATGGTAAGTCTAGTACTAG-AATTG 3253 >seq6422 Length=30189 Score = 95.1 bits (104), Expect = 2e-16 Identities = 84/100 (84%), Gaps = 4/100 (4%) Strand=Plus/Plus Query 118 CCTCTTTAAGATATATTATACTT-TATAAAGAGTTACATATAAAATACCACAGCCACGAG 176 ||||||||||||||| || |||| | |||||||||||||||||||||||||||||||| | Sbjct 21140 CCTCTTTAAGATATA-TAAACTTATGTAAAGAGTTACATATAAAATACCACAGCCACGGG 21198 Query 177 AAATAATGAAGTTCTATAGAAAATTTAGGA-TAGCAATTG 215 ||||||| || |||| | || | ||| | ||| ||||| Sbjct 21199 AAATAATATAGAGCTATGGTAAGTCTAGTACTAG-AATTG 21237 >seq2447 Length=64305 Score = 80.6 bits (88), Expect = 4e-12 Identities = 75/93 (81%), Gaps = 2/93 (2%) Strand=Plus/Minus Query 118 CCTCTTTAAGATATATTATACTT-TATAAAGAGTTACATATAAAATACCACAGCCACGAG 176 |||||||||||||||| | |||| | ||||||||| ||||||| ||||||||||| || Sbjct 3233 CCTCTTTAAGATATATAA-ACTTATTTAAAGAGTTTGATATAAATAACCACAGCCACAAG 3175 Query 177 AAATAATGAAGTTCTATAGAAAATTTAGGATAG 209 |||| | || |||||| |||| ||| |||| Sbjct 3174 AAATCGTATAGAGCTATAGCAAATCTAGAATAG 3142 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7201225346266