Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Operophtera_20brumata_20[genbank_20GCA_5F001266575.1_202015-08-11] 25,801 sequences; 638,207,720 total letters Query= NC_008861.1 Length=2295 Score E Sequences producing significant alignments: (Bits) Value seq2447 111 2e-21 seq6422 109 8e-21 seq9855 105 1e-19 >seq2447 Length=64305 Score = 111 bits (122), Expect = 2e-21 Identities = 107/136 (79%), Gaps = 1/136 (1%) Strand=Plus/Plus Query 521 TGGCTGATAATTTATATTCTAGTATTTCCTATAGGCTTACCTCATTTCCTGTGGCTGTGG 580 |||| || || | |||||||| |||| |||||| || ||||| ||||||||||| Sbjct 3129 TGGCGGACCATCTCTATTCTAG-ATTTGCTATAGCTCTATACGATTTCTTGTGGCTGTGG 3187 Query 581 TATTTTATATATAACTCTTTACATAAGTTAAAATATCTTAAAGAGGTAAATAAATGATAT 640 | ||||||| ||||||||| ||||||| | |||||||||||||||| | | | || || Sbjct 3188 TTATTTATATCAAACTCTTTAAATAAGTTTATATATCTTAAAGAGGTATAAATAGGAAAT 3247 Query 641 AGTAATAGCTATATAG 656 || | ||||||||||| Sbjct 3248 AGAACTAGCTATATAG 3263 >seq6422 Length=30189 Score = 109 bits (120), Expect = 8e-21 Identities = 77/88 (88%), Gaps = 0/88 (0%) Strand=Plus/Minus Query 564 ATTTCCTGTGGCTGTGGTATTTTATATATAACTCTTTACATAAGTTAAAATATCTTAAAG 623 |||||| |||||||||||||||||||| |||||||||||||||||| | ||||||||||| Sbjct 21202 ATTTCCCGTGGCTGTGGTATTTTATATGTAACTCTTTACATAAGTTTATATATCTTAAAG 21143 Query 624 AGGTAAATAAATGATATAGTAATAGCTA 651 ||||| | | | |||||||| ||||| Sbjct 21142 AGGTATAAATAGCATATAGTATAAGCTA 21115 >seq9855 Length=15086 Score = 105 bits (116), Expect = 1e-19 Identities = 76/88 (86%), Gaps = 0/88 (0%) Strand=Plus/Minus Query 564 ATTTCCTGTGGCTGTGGTATTTTATATATAACTCTTTACATAAGTTAAAATATCTTAAAG 623 |||||| |||||||||||||||||||| |||||||||||||||||| | ||||||||||| Sbjct 3218 ATTTCCCGTGGCTGTGGTATTTTATATGTAACTCTTTACATAAGTTTATATATCTTAAAG 3159 Query 624 AGGTAAATAAATGATATAGTAATAGCTA 651 ||||| | | | ||||||| ||||| Sbjct 3158 AGGTATAAATAGCATATAGTGTAAGCTA 3131 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7233216573926