Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Operophtera_20brumata_20[genbank_20GCA_5F001266575.1_202015-08-11]
25,801 sequences; 638,207,720 total letters
Query= NC_008861.1
Length=2295
Score E
Sequences producing significant alignments: (Bits) Value
seq2447 111 2e-21
seq6422 109 8e-21
seq9855 105 1e-19
>seq2447
Length=64305
Score = 111 bits (122), Expect = 2e-21
Identities = 107/136 (79%), Gaps = 1/136 (1%)
Strand=Plus/Plus
Query 521 TGGCTGATAATTTATATTCTAGTATTTCCTATAGGCTTACCTCATTTCCTGTGGCTGTGG 580
|||| || || | |||||||| |||| |||||| || ||||| |||||||||||
Sbjct 3129 TGGCGGACCATCTCTATTCTAG-ATTTGCTATAGCTCTATACGATTTCTTGTGGCTGTGG 3187
Query 581 TATTTTATATATAACTCTTTACATAAGTTAAAATATCTTAAAGAGGTAAATAAATGATAT 640
| ||||||| ||||||||| ||||||| | |||||||||||||||| | | | || ||
Sbjct 3188 TTATTTATATCAAACTCTTTAAATAAGTTTATATATCTTAAAGAGGTATAAATAGGAAAT 3247
Query 641 AGTAATAGCTATATAG 656
|| | |||||||||||
Sbjct 3248 AGAACTAGCTATATAG 3263
>seq6422
Length=30189
Score = 109 bits (120), Expect = 8e-21
Identities = 77/88 (88%), Gaps = 0/88 (0%)
Strand=Plus/Minus
Query 564 ATTTCCTGTGGCTGTGGTATTTTATATATAACTCTTTACATAAGTTAAAATATCTTAAAG 623
|||||| |||||||||||||||||||| |||||||||||||||||| | |||||||||||
Sbjct 21202 ATTTCCCGTGGCTGTGGTATTTTATATGTAACTCTTTACATAAGTTTATATATCTTAAAG 21143
Query 624 AGGTAAATAAATGATATAGTAATAGCTA 651
||||| | | | |||||||| |||||
Sbjct 21142 AGGTATAAATAGCATATAGTATAAGCTA 21115
>seq9855
Length=15086
Score = 105 bits (116), Expect = 1e-19
Identities = 76/88 (86%), Gaps = 0/88 (0%)
Strand=Plus/Minus
Query 564 ATTTCCTGTGGCTGTGGTATTTTATATATAACTCTTTACATAAGTTAAAATATCTTAAAG 623
|||||| |||||||||||||||||||| |||||||||||||||||| | |||||||||||
Sbjct 3218 ATTTCCCGTGGCTGTGGTATTTTATATGTAACTCTTTACATAAGTTTATATATCTTAAAG 3159
Query 624 AGGTAAATAAATGATATAGTAATAGCTA 651
||||| | | | ||||||| |||||
Sbjct 3158 AGGTATAAATAGCATATAGTGTAAGCTA 3131
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7233216573926
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |