Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Operophtera_20brumata_20[genbank_20GCA_5F001266575.1_202015-08-11] 25,801 sequences; 638,207,720 total letters Query= NC_008864.1 Length=2341 Score E Sequences producing significant alignments: (Bits) Value seq2447 107 3e-20 seq6422 98.7 1e-17 seq9855 96.9 5e-17 >seq2447 Length=64305 Score = 107 bits (118), Expect = 3e-20 Identities = 105/134 (78%), Gaps = 1/134 (1%) Strand=Plus/Plus Query 760 CCATCTCTATCCTAGATTTAATATAAAGCTATAGTATTTCACCGTGGCTGTGGTCTTTTA 819 |||||||||| |||||||| |||| ||||| ||||| ||||||||||| |||| Sbjct 3136 CCATCTCTATTCTAGATTTGCTATAGCTCTATACGATTTCTT-GTGGCTGTGGTTATTTA 3194 Query 820 TTAATAACTCTTTAAAGAATATAATATATCTTAAAGGGGTATAGGTAGCATATAGCTATA 879 | ||||||||||| || | ||||||||||||| |||||| ||| | |||| || Sbjct 3195 TATCAAACTCTTTAAATAAGTTTATATATCTTAAAGAGGTATAAATAGGAAATAGAACTA 3254 Query 880 GCTATATAGTTAGA 893 |||||||||||||| Sbjct 3255 GCTATATAGTTAGA 3268 >seq6422 Length=30189 Score = 98.7 bits (108), Expect = 1e-17 Identities = 108/137 (79%), Gaps = 5/137 (4%) Strand=Plus/Minus Query 759 GCCATCTCTA-TCCTAGATTTAATATAAAGCTATAGTATTTCACCGTGGCTGTGGTCTTT 817 |||| |||| | ||||| ||| ||| ||||| |||||| ||||||||||||| ||| Sbjct 21239 GCCAATTCTAGTACTAGACTTACCATAGCTCTATATTATTTC-CCGTGGCTGTGGTATTT 21181 Query 818 TATTAATAACTCTTTAAAGAATATAATATATCTTAAAGGGGTATAGGTAGCATATAGCTA 877 ||| |||||||||| | || | ||||||||||||| |||||| |||||||||| || Sbjct 21180 TATATGTAACTCTTTACATAAGTTTATATATCTTAAAGAGGTATAAATAGCATATAG-TA 21122 Query 878 T-AGCTATATAGTTAGA 893 | ||||| | || |||| Sbjct 21121 TAAGCTA-ACAGCTAGA 21106 >seq9855 Length=15086 Score = 96.9 bits (106), Expect = 5e-17 Identities = 93/117 (79%), Gaps = 2/117 (2%) Strand=Plus/Minus Query 759 GCCATCTCTA-TCCTAGATTTAATATAAAGCTATAGTATTTCACCGTGGCTGTGGTCTTT 817 |||| |||| | ||||| ||| ||| ||||| |||||| ||||||||||||| ||| Sbjct 3255 GCCAATTCTAGTACTAGACTTACCATAGCTCTATATTATTTC-CCGTGGCTGTGGTATTT 3197 Query 818 TATTAATAACTCTTTAAAGAATATAATATATCTTAAAGGGGTATAGGTAGCATATAG 874 ||| |||||||||| | || | ||||||||||||| |||||| |||||||||| Sbjct 3196 TATATGTAACTCTTTACATAAGTTTATATATCTTAAAGAGGTATAAATAGCATATAG 3140 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7380376221162