Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Operophtera_20brumata_20[genbank_20GCA_5F001266575.1_202015-08-11]
25,801 sequences; 638,207,720 total letters
Query= NC_008864.1
Length=2341
Score E
Sequences producing significant alignments: (Bits) Value
seq2447 107 3e-20
seq6422 98.7 1e-17
seq9855 96.9 5e-17
>seq2447
Length=64305
Score = 107 bits (118), Expect = 3e-20
Identities = 105/134 (78%), Gaps = 1/134 (1%)
Strand=Plus/Plus
Query 760 CCATCTCTATCCTAGATTTAATATAAAGCTATAGTATTTCACCGTGGCTGTGGTCTTTTA 819
|||||||||| |||||||| |||| ||||| ||||| ||||||||||| ||||
Sbjct 3136 CCATCTCTATTCTAGATTTGCTATAGCTCTATACGATTTCTT-GTGGCTGTGGTTATTTA 3194
Query 820 TTAATAACTCTTTAAAGAATATAATATATCTTAAAGGGGTATAGGTAGCATATAGCTATA 879
| ||||||||||| || | ||||||||||||| |||||| ||| | |||| ||
Sbjct 3195 TATCAAACTCTTTAAATAAGTTTATATATCTTAAAGAGGTATAAATAGGAAATAGAACTA 3254
Query 880 GCTATATAGTTAGA 893
||||||||||||||
Sbjct 3255 GCTATATAGTTAGA 3268
>seq6422
Length=30189
Score = 98.7 bits (108), Expect = 1e-17
Identities = 108/137 (79%), Gaps = 5/137 (4%)
Strand=Plus/Minus
Query 759 GCCATCTCTA-TCCTAGATTTAATATAAAGCTATAGTATTTCACCGTGGCTGTGGTCTTT 817
|||| |||| | ||||| ||| ||| ||||| |||||| ||||||||||||| |||
Sbjct 21239 GCCAATTCTAGTACTAGACTTACCATAGCTCTATATTATTTC-CCGTGGCTGTGGTATTT 21181
Query 818 TATTAATAACTCTTTAAAGAATATAATATATCTTAAAGGGGTATAGGTAGCATATAGCTA 877
||| |||||||||| | || | ||||||||||||| |||||| |||||||||| ||
Sbjct 21180 TATATGTAACTCTTTACATAAGTTTATATATCTTAAAGAGGTATAAATAGCATATAG-TA 21122
Query 878 T-AGCTATATAGTTAGA 893
| ||||| | || ||||
Sbjct 21121 TAAGCTA-ACAGCTAGA 21106
>seq9855
Length=15086
Score = 96.9 bits (106), Expect = 5e-17
Identities = 93/117 (79%), Gaps = 2/117 (2%)
Strand=Plus/Minus
Query 759 GCCATCTCTA-TCCTAGATTTAATATAAAGCTATAGTATTTCACCGTGGCTGTGGTCTTT 817
|||| |||| | ||||| ||| ||| ||||| |||||| ||||||||||||| |||
Sbjct 3255 GCCAATTCTAGTACTAGACTTACCATAGCTCTATATTATTTC-CCGTGGCTGTGGTATTT 3197
Query 818 TATTAATAACTCTTTAAAGAATATAATATATCTTAAAGGGGTATAGGTAGCATATAG 874
||| |||||||||| | || | ||||||||||||| |||||| ||||||||||
Sbjct 3196 TATATGTAACTCTTTACATAAGTTTATATATCTTAAAGAGGTATAAATAGCATATAG 3140
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7380376221162
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |