Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Operophtera_20brumata_20[genbank_20GCA_5F001266575.1_202015-08-11]
25,801 sequences; 638,207,720 total letters
Query= NC_008866.1
Length=2358
Score E
Sequences producing significant alignments: (Bits) Value
seq9855 109 8e-21
seq6422 109 8e-21
seq2447 89.7 8e-15
>seq9855
Length=15086
Score = 109 bits (120), Expect = 8e-21
Identities = 90/106 (85%), Gaps = 3/106 (3%)
Strand=Plus/Minus
Query 2192 AATGCTA-TCCTAGATTTTCTATGGATCTTTATTATTTCCCGTGGCTGTGGTATTTTATA 2250
||| ||| | ||||| || | || | ||| ||||||||||||||||||||||||||||||
Sbjct 3252 AATTCTAGTACTAGACTTACCATAGCTCTATATTATTTCCCGTGGCTGTGGTATTTTATA 3193
Query 2251 TATAACTCTTTGTA-AAGTTAAATATATCTTAAAGAGGTATATATA 2295
| ||||||||| | ||||| | ||||||||||||||||||| |||
Sbjct 3192 TGTAACTCTTTACATAAGTTTA-TATATCTTAAAGAGGTATAAATA 3148
>seq6422
Length=30189
Score = 109 bits (120), Expect = 8e-21
Identities = 90/106 (85%), Gaps = 3/106 (3%)
Strand=Plus/Minus
Query 2192 AATGCTA-TCCTAGATTTTCTATGGATCTTTATTATTTCCCGTGGCTGTGGTATTTTATA 2250
||| ||| | ||||| || | || | ||| ||||||||||||||||||||||||||||||
Sbjct 21236 AATTCTAGTACTAGACTTACCATAGCTCTATATTATTTCCCGTGGCTGTGGTATTTTATA 21177
Query 2251 TATAACTCTTTGTA-AAGTTAAATATATCTTAAAGAGGTATATATA 2295
| ||||||||| | ||||| | ||||||||||||||||||| |||
Sbjct 21176 TGTAACTCTTTACATAAGTTTA-TATATCTTAAAGAGGTATAAATA 21132
>seq2447
Length=64305
Score = 89.7 bits (98), Expect = 8e-15
Identities = 82/101 (81%), Gaps = 2/101 (2%)
Strand=Plus/Plus
Query 2196 CTATCCTAGATTTTCTATGGATCTTTATTATTTCCCGTGGCTGTGGTATTTTATATATAA 2255
|||| |||||||| |||| | ||| || ||||| ||||||||||| ||||||| ||
Sbjct 3142 CTATTCTAGATTTGCTATAGCTCTATACGATTTCTTGTGGCTGTGGTTATTTATATCAAA 3201
Query 2256 CTCTTTGTA-AAGTTAAATATATCTTAAAGAGGTATATATA 2295
|||||| | ||||| |||||||||||||||||||| |||
Sbjct 3202 CTCTTTAAATAAGTT-TATATATCTTAAAGAGGTATAAATA 3241
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7434761308184
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |