Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Operophtera_20brumata_20[genbank_20GCA_5F001266575.1_202015-08-11] 25,801 sequences; 638,207,720 total letters Query= NC_008866.1 Length=2358 Score E Sequences producing significant alignments: (Bits) Value seq9855 109 8e-21 seq6422 109 8e-21 seq2447 89.7 8e-15 >seq9855 Length=15086 Score = 109 bits (120), Expect = 8e-21 Identities = 90/106 (85%), Gaps = 3/106 (3%) Strand=Plus/Minus Query 2192 AATGCTA-TCCTAGATTTTCTATGGATCTTTATTATTTCCCGTGGCTGTGGTATTTTATA 2250 ||| ||| | ||||| || | || | ||| |||||||||||||||||||||||||||||| Sbjct 3252 AATTCTAGTACTAGACTTACCATAGCTCTATATTATTTCCCGTGGCTGTGGTATTTTATA 3193 Query 2251 TATAACTCTTTGTA-AAGTTAAATATATCTTAAAGAGGTATATATA 2295 | ||||||||| | ||||| | ||||||||||||||||||| ||| Sbjct 3192 TGTAACTCTTTACATAAGTTTA-TATATCTTAAAGAGGTATAAATA 3148 >seq6422 Length=30189 Score = 109 bits (120), Expect = 8e-21 Identities = 90/106 (85%), Gaps = 3/106 (3%) Strand=Plus/Minus Query 2192 AATGCTA-TCCTAGATTTTCTATGGATCTTTATTATTTCCCGTGGCTGTGGTATTTTATA 2250 ||| ||| | ||||| || | || | ||| |||||||||||||||||||||||||||||| Sbjct 21236 AATTCTAGTACTAGACTTACCATAGCTCTATATTATTTCCCGTGGCTGTGGTATTTTATA 21177 Query 2251 TATAACTCTTTGTA-AAGTTAAATATATCTTAAAGAGGTATATATA 2295 | ||||||||| | ||||| | ||||||||||||||||||| ||| Sbjct 21176 TGTAACTCTTTACATAAGTTTA-TATATCTTAAAGAGGTATAAATA 21132 >seq2447 Length=64305 Score = 89.7 bits (98), Expect = 8e-15 Identities = 82/101 (81%), Gaps = 2/101 (2%) Strand=Plus/Plus Query 2196 CTATCCTAGATTTTCTATGGATCTTTATTATTTCCCGTGGCTGTGGTATTTTATATATAA 2255 |||| |||||||| |||| | ||| || ||||| ||||||||||| ||||||| || Sbjct 3142 CTATTCTAGATTTGCTATAGCTCTATACGATTTCTTGTGGCTGTGGTTATTTATATCAAA 3201 Query 2256 CTCTTTGTA-AAGTTAAATATATCTTAAAGAGGTATATATA 2295 |||||| | ||||| |||||||||||||||||||| ||| Sbjct 3202 CTCTTTAAATAAGTT-TATATATCTTAAAGAGGTATAAATA 3241 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7434761308184