Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Operophtera_20brumata_20[genbank_20GCA_5F001266575.1_202015-08-11] 25,801 sequences; 638,207,720 total letters Query= NC_008873.1 Length=2462 Score E Sequences producing significant alignments: (Bits) Value seq1249 78.8 1e-11 >seq1249 Length=132591 Score = 78.8 bits (86), Expect = 1e-11 Identities = 125/176 (71%), Gaps = 4/176 (2%) Strand=Plus/Minus Query 891 GTGGAACATGACCCTTCTTGACCCATTT-AG--GGTATTATTTAGAACTAAAAAATACCT 947 ||||||||||||||| ||||||||||| || || | |||| ||| |||||||| Sbjct 111265 GTGGAACATGACCCTGTTTGACCCATTTGAGTTCGTCTAATTTTGAAAAAAAAAATAGTG 111206 Query 948 TCGTGTAGCTCAGGTCATCAATAGGCCAGATCAGGAATAAAAATTGGGAATTTTTAATCC 1007 || |||||| | |||| | ||| ||| |||||||| || ||| || ||| | Sbjct 111205 TCAGGTAGCTTGGCTCATTGACAGGTTGGATAGAGAATAAAATTTCCGAAATTCCAATTC 111146 Query 1008 CATCATTTATaaaaaaaaTGTTTTTTCAAACGCTCACGCTGGAACATTTTTTGGAA 1063 ||||| || |||||| |||| |||| | | || ||||||| ||| ||||| Sbjct 111145 TTTCATTGCAAAGAAAAAT-ATTTTCCAAATGATTACCTTGGAACACTTTGTGGAA 111091 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7767470075848