Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Operophtera_20brumata_20[genbank_20GCA_5F001266575.1_202015-08-11]
25,801 sequences; 638,207,720 total letters
Query= NC_008876.1
Length=2548
Score E
Sequences producing significant alignments: (Bits) Value
seq6422 127 3e-26
seq9855 118 2e-23
seq2447 95.1 2e-16
seq2536 93.3 7e-16
>seq6422
Length=30189
Score = 127 bits (140), Expect = 3e-26
Identities = 160/213 (75%), Gaps = 9/213 (4%)
Strand=Plus/Minus
Query 18 ATAGCTTTGCGTTATTCTTCGTGGCTGTGGTATATTATATTTAACTCTTTAGATAATTTT 77
|||||| | ||||| |||||||||||||| |||||| |||||||||| |||| |||
Sbjct 21215 ATAGCTCTATATTATTTCCCGTGGCTGTGGTATTTTATATGTAACTCTTTACATAAGTTT 21156
Query 78 AATTATCTTAAAGAGGCATATGTCTAGCAAATAGCAATAGCATTGTGAATAGGAATATAC 137
| ||||||||||||| ||| ||||| |||| | ||| | ||| ||| ||
Sbjct 21155 ATATATCTTAAAGAGG--TATAAATAGCATATAGTATAAGC-TAACAGCTAGAAATGTAT 21099
Query 138 TGCTATA-GGCATAGTCACTAATGATTATAGTAAACTTGTATAGTCTAGGCATAAGCTGA 196
||||||| ||||||| || ||| ||||| ||| |||||| || |||||||||||
Sbjct 21098 TGCTATAGGGCATAGCCAATAAAAGTTATATGAAA---ATATAGTATA-GCATAAGCTGA 21043
Query 197 GGTGAGACTGAATGTGCCTGTCACACCCGCCAC 229
||||||| ||| | ||| ||||||||||||
Sbjct 21042 GGTGAGA-TGATCTGGGCTGCCACACCCGCCAC 21011
>seq9855
Length=15086
Score = 118 bits (130), Expect = 2e-23
Identities = 158/213 (74%), Gaps = 9/213 (4%)
Strand=Plus/Minus
Query 18 ATAGCTTTGCGTTATTCTTCGTGGCTGTGGTATATTATATTTAACTCTTTAGATAATTTT 77
|||||| | ||||| |||||||||||||| |||||| |||||||||| |||| |||
Sbjct 3231 ATAGCTCTATATTATTTCCCGTGGCTGTGGTATTTTATATGTAACTCTTTACATAAGTTT 3172
Query 78 AATTATCTTAAAGAGGCATATGTCTAGCAAATAGCAATAGCATTGTGAATAGGAATATAC 137
| ||||||||||||| ||| ||||| |||| ||| | ||| ||| ||
Sbjct 3171 ATATATCTTAAAGAGG--TATAAATAGCATATAGTGTAAGC-TAACAGCTAGAAATGTAT 3115
Query 138 TGCTATA-GGCATAGTCACTAATGATTATAGTAAACTTGTATAGTCTAGGCATAAGCTGA 196
||||||| ||||||| || ||| ||||| ||| |||||| || |||||||||||
Sbjct 3114 TGCTATAGGGCATAGCCAATAAAAGTTATATGAAA---ATATAGTATA-GCATAAGCTGA 3059
Query 197 GGTGAGACTGAATGTGCCTGTCACACCCGCCAC 229
|||| || ||| | ||| ||||||||||||
Sbjct 3058 GGTGTGA-TGATCTGGGCTGCCACACCCGCCAC 3027
>seq2447
Length=64305
Score = 95.1 bits (104), Expect = 2e-16
Identities = 134/184 (73%), Gaps = 6/184 (3%)
Strand=Plus/Plus
Query 1 TATTCTAGATTTGCTCTATAGCTTTGCGTTATTCTTCGTGGCTGTGGTATATTATATTTA 60
||||||||||||||| || || | || | ||||| ||||||||||| |||||| |
Sbjct 3143 TATTCTAGATTTGCTATAGCTCTATACGAT-TTCTT-GTGGCTGTGGTTATTTATATCAA 3200
Query 61 ACTCTTTAGATAATTTTAATTATCTTAAAGAGGCATATGTCTAGCAAATAGCAATAGCAT 120
|||||||| |||| |||| ||||||||||||| ||| ||| |||||| | ||||
Sbjct 3201 ACTCTTTAAATAAGTTTATATATCTTAAAGAGG--TATAAATAGGAAATAGAACTAGCTA 3258
Query 121 TGTGAATAGGAATATACTGCTATAGGCATAGTCACTAATGATTATAGTAAACTTGTATAG 180
| | ||| ||| || | ||| || |||||| || | ||||||||| | ||||
Sbjct 3259 TATAGTTAGAAATGTATTATAATAAGCGTAGTCA--TATAAGTATAGTAAATTATAATAG 3316
Query 181 TCTA 184
| ||
Sbjct 3317 TATA 3320
>seq2536
Length=66406
Score = 93.3 bits (102), Expect = 7e-16
Identities = 175/254 (69%), Gaps = 15/254 (6%)
Strand=Plus/Minus
Query 1494 GACCAATATGGATAACATTTCTCCTCGTTGTTCTCAATGATCTTGGTCAACACCACGATG 1553
|||||||| ||||| ||||||| || |||| ||| |||| || ||||| ||||||||
Sbjct 62205 GACCAATAAGGATATCATTTCTGCTTATTGTCCTCTTTGATATTTGTCAATACCACGATA 62146
Query 1554 ATTCGGGAATTTTGCTGCGTGATCATGTCGAAAAAATCATCGATCGTTTCGTCCATGGGC 1613
||| | | | |||| | |||||| |||| ||||| ||||| || || ||
Sbjct 62145 ATTTCGCTCTCATTCTGCCAAA-CATGTCCCAAAAGTCATCCATCGTCCAGTACAACGGT 62087
Query 1614 GCTTGGGTAGCGATGAGAT-CTTGTCCCTTTCTCAAACTGCGCACATAATTTGCGTGGAT 1672
|||| |||||||||| | ||| | ||||| || | | ||| ||||| || | ||
Sbjct 62086 GCTTAAGTAGCGATGAATTTCTTCTGACTTTCCCAGCC-GTTCACGTAATTGGCATTAAT 62028
Query 1673 GTAGTCCGATGCATTGGCAGACACAAAATCATCAGACTCTGACAATATCACACGCGAATG 1732
|||||||||| | || ||| | || ||| || ||||||| ||||
Sbjct 62027 GTAGTCCGAT---TGGGTAGA---------GTTCGATCTTGATAACTTCACACGGGAATA 61980
Query 1733 ATCCCAGCATGGGA 1746
||||||||||||||
Sbjct 61979 ATCCCAGCATGGGA 61966
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 8042594633724
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |