Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Operophtera_20brumata_20[genbank_20GCA_5F001266575.1_202015-08-11] 25,801 sequences; 638,207,720 total letters Query= NC_008879.1 Length=2590 Score E Sequences producing significant alignments: (Bits) Value seq16437 78.8 2e-11 >seq16437 Length=3918 Score = 78.8 bits (86), Expect = 2e-11 Identities = 114/151 (75%), Gaps = 9/151 (6%) Strand=Plus/Plus Query 2264 CGTGTGGCGGGTTTGGCAGGTAATCTCCATTCCT-CCTTAGCTCATTAAtata-tactat 2321 ||||| || ||| ||| |||| | |||| ||| ||| |||| || | |||| || ||| Sbjct 1016 CGTGTAGCAGGTG-GGCGGGTA-TATCCAGTCCAACCTCAGCTTAT-ATTATACTATTAT 1072 Query 2322 atttttacactacgtttaccgactatacctatattagtatatttctaactatatagctga 2381 | ||| || ||| |||| ||||| | ||| || || |||||||||||||||||| Sbjct 1073 AATTT-ACTATACTTTTAT-GACTACGCTTATTATAATACATTTCTAACTATATAGCTA- 1129 Query 2382 cgctatatatactatttataCCTCTTTAAGA 2412 | | ||| | |||||||||||||||||||| Sbjct 1130 -GTTCTATTTCCTATTTATACCTCTTTAAGA 1159 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8176957789896