Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Operophtera_20brumata_20[genbank_20GCA_5F001266575.1_202015-08-11]
25,801 sequences; 638,207,720 total letters
Query= NC_008881.1
Length=2615
Score E
Sequences producing significant alignments: (Bits) Value
seq9855 170 3e-39
seq6422 165 1e-37
seq2447 140 5e-30
seq1896 77.0 5e-11
>seq9855
Length=15086
Score = 170 bits (188), Expect = 3e-39
Identities = 156/191 (82%), Gaps = 6/191 (3%)
Strand=Plus/Plus
Query 308 ACCTCAGCCTATGCTTATACCTTATTTTCCAATAGCCTTTACTGGCGATATC-TCTAGTA 366
|||||||| |||||| |||| ||||||| ||| | |||| |||| || | | ||| |
Sbjct 3056 ACCTCAGCTTATGCT-ATACTATATTTTCATATAACTTTTATTGGCTATGCCCTATAGCA 3114
Query 367 ATACATTTCTACCTATATAGCTAGCGTTATATTCTATATTTATAC-TCTTTAAGATAAAT 425
||||||||||| || | ||||| | ||||| |||| |||||| ||||||||||| ||
Sbjct 3115 ATACATTTCTAGCTGT-TAGCTTACACTATATGCTAT--TTATACCTCTTTAAGATATAT 3171
Query 426 AACATTATTTAAAGAGTTACATATAAAATACCACAGCCACGAGAAATAATATACGGCTAT 485
|| |||| |||||||||||||||||||||||||||||||| ||||||||||| |||||
Sbjct 3172 AAACTTATGTAAAGAGTTACATATAAAATACCACAGCCACGGGAAATAATATAGAGCTAT 3231
Query 486 GGAAAATCTAG 496
|| || |||||
Sbjct 3232 GGTAAGTCTAG 3242
>seq6422
Length=30189
Score = 165 bits (182), Expect = 1e-37
Identities = 155/191 (81%), Gaps = 6/191 (3%)
Strand=Plus/Plus
Query 308 ACCTCAGCCTATGCTTATACCTTATTTTCCAATAGCCTTTACTGGCGATATC-TCTAGTA 366
|||||||| |||||| |||| ||||||| ||| | |||| |||| || | | ||| |
Sbjct 21040 ACCTCAGCTTATGCT-ATACTATATTTTCATATAACTTTTATTGGCTATGCCCTATAGCA 21098
Query 367 ATACATTTCTACCTATATAGCTAGCGTTATATTCTATATTTATAC-TCTTTAAGATAAAT 425
||||||||||| || | ||||| ||||| |||| |||||| ||||||||||| ||
Sbjct 21099 ATACATTTCTAGCTGT-TAGCTTATACTATATGCTAT--TTATACCTCTTTAAGATATAT 21155
Query 426 AACATTATTTAAAGAGTTACATATAAAATACCACAGCCACGAGAAATAATATACGGCTAT 485
|| |||| |||||||||||||||||||||||||||||||| ||||||||||| |||||
Sbjct 21156 AAACTTATGTAAAGAGTTACATATAAAATACCACAGCCACGGGAAATAATATAGAGCTAT 21215
Query 486 GGAAAATCTAG 496
|| || |||||
Sbjct 21216 GGTAAGTCTAG 21226
>seq2447
Length=64305
Score = 140 bits (154), Expect = 5e-30
Identities = 114/136 (84%), Gaps = 3/136 (2%)
Strand=Plus/Minus
Query 365 TAATACATTTCTACCTATATAGCTAGCGTTATATTCTATATTTATAC-TCTTTAAGATAA 423
||||||||||||| |||||||||||| || |||| ||||||||| |||||||||||
Sbjct 3277 TAATACATTTCTAACTATATAGCTAG--TTCTATTTCCTATTTATACCTCTTTAAGATAT 3220
Query 424 ATAACATTATTTAAAGAGTTACATATAAAATACCACAGCCACGAGAAATAATATACGGCT 483
|||| |||||||||||||| ||||||| ||||||||||| |||||| |||| |||
Sbjct 3219 ATAAACTTATTTAAAGAGTTTGATATAAATAACCACAGCCACAAGAAATCGTATAGAGCT 3160
Query 484 ATGGAAAATCTAGAAT 499
|| | |||||||||||
Sbjct 3159 ATAGCAAATCTAGAAT 3144
>seq1896
Length=105120
Score = 77.0 bits (84), Expect = 5e-11
Identities = 113/158 (72%), Gaps = 13/158 (8%)
Strand=Plus/Plus
Query 347 TACTGGCGATATCTCTAGTAATACATTTCTACCTATATAGCTAGCGTTATATTCTATATT 406
|| |||| || || ||| ||| ||| || | | ||||||| | |||| | ||||
Sbjct 45618 TAATGGCATTAACTATAGCAATTTATTATTAGGTCTCTAGCTAGTGCTATAACCC-TATT 45676
Query 407 TATACTCTTT-AAGATAAA----TAACATTATTTAAAGAGTTACATATAAAATACCACAG 461
||| | | || |||||| | ||| |||||||||| |||||||||||||||
Sbjct 45677 TATTCCCCTTCAAGATATAAGTATAAAATTATTTAAAC-------TATAAAATACCACAG 45729
Query 462 CCACGAGAAATAATATACGGCTATGGAAAATCTAGAAT 499
|||| |||||| ||||| ||||| | |||||||| ||
Sbjct 45730 CCACAAGAAATTATATAAAGCTATAGTAAATCTAGGAT 45767
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 8256935859046
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |