Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Operophtera_20brumata_20[genbank_20GCA_5F001266575.1_202015-08-11] 25,801 sequences; 638,207,720 total letters Query= NC_008882.1 Length=2625 Score E Sequences producing significant alignments: (Bits) Value seq9855 138 2e-29 seq6422 138 2e-29 seq2447 105 1e-19 >seq9855 Length=15086 Score = 138 bits (152), Expect = 2e-29 Identities = 90/98 (92%), Gaps = 1/98 (1%) Strand=Plus/Plus Query 1638 CTATATGCTATATATACCTCTTTAAGATAATTAAACTTATTTAAAGAGTTAAATATAATA 1697 ||||||||||| ||||||||||||||||| ||||||||| |||||||||| |||||| | Sbjct 3140 CTATATGCTATTTATACCTCTTTAAGATATATAAACTTATGTAAAGAGTTACATATAAAA 3199 Query 1698 TACCACAGCCATGGGAAATAATATAGAGCTATAGGTAA 1735 ||||||||||| |||||||||||||||||||| ||||| Sbjct 3200 TACCACAGCCACGGGAAATAATATAGAGCTAT-GGTAA 3236 >seq6422 Length=30189 Score = 138 bits (152), Expect = 2e-29 Identities = 90/98 (92%), Gaps = 1/98 (1%) Strand=Plus/Plus Query 1638 CTATATGCTATATATACCTCTTTAAGATAATTAAACTTATTTAAAGAGTTAAATATAATA 1697 ||||||||||| ||||||||||||||||| ||||||||| |||||||||| |||||| | Sbjct 21124 CTATATGCTATTTATACCTCTTTAAGATATATAAACTTATGTAAAGAGTTACATATAAAA 21183 Query 1698 TACCACAGCCATGGGAAATAATATAGAGCTATAGGTAA 1735 ||||||||||| |||||||||||||||||||| ||||| Sbjct 21184 TACCACAGCCACGGGAAATAATATAGAGCTAT-GGTAA 21220 >seq2447 Length=64305 Score = 105 bits (116), Expect = 1e-19 Identities = 88/108 (81%), Gaps = 0/108 (0%) Strand=Plus/Minus Query 1638 CTATATGCTATATATACCTCTTTAAGATAATTAAACTTATTTAAAGAGTTAAATATAATA 1697 |||| | |||| ||||||||||||||||| ||||||||||||||||||| |||||| Sbjct 3249 CTATTTCCTATTTATACCTCTTTAAGATATATAAACTTATTTAAAGAGTTTGATATAAAT 3190 Query 1698 TACCACAGCCATGGGAAATAATATAGAGCTATAGGTAATAAAGTATAG 1745 |||||||||| ||||| ||||||||||||| ||| || |||| Sbjct 3189 AACCACAGCCACAAGAAATCGTATAGAGCTATAGCAAATCTAGAATAG 3142 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8288927086706