Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Operophtera_20brumata_20[genbank_20GCA_5F001266575.1_202015-08-11] 25,801 sequences; 638,207,720 total letters Query= NC_008883.1 Length=2631 Score E Sequences producing significant alignments: (Bits) Value seq6422 179 6e-42 seq9855 178 2e-41 >seq6422 Length=30189 Score = 179 bits (198), Expect = 6e-42 Identities = 251/341 (74%), Gaps = 22/341 (6%) Strand=Plus/Minus Query 325 TGGCTGGCTAATTCCATT-CTAGATTCACCATAGCTTTAAATTATTTTTCGTGGCTGTGG 383 |||||| | ||||| | | ||||| | ||||||||| || ||||||| ||||||||||| Sbjct 21244 TGGCTGCC-AATTCTAGTACTAGACTTACCATAGCTCTATATTATTTCCCGTGGCTGTGG 21186 Query 384 tattatatatttaactctttatataatattatatatcttaaagaggtatttat---atat 440 |||| ||||| |||||||||| |||| ||||||||||||||||||||| || |||| Sbjct 21185 TATTTTATATGTAACTCTTTACATAAGTTTATATATCTTAAAGAGGTATAAATAGCATAT 21126 Query 441 gatataatgctagtatatagctgggaatataGTGCTATA-AGTATAGCCTGTAAATGTTG 499 ||||| |||| | |||| | ||| || ||||||| | |||||| |||| ||| Sbjct 21125 AGTATAA-GCTA----ACAGCTAGAAATGTATTGCTATAGGGCATAGCCAATAAAAGTTA 21071 Query 500 TACGAATATAAAGTATAAGTATAAGCTGTGGAAAGATTGAAATTGGTTGCCACGCCTGCC 559 || ||| ||| ||||| || |||||||| || ||| ||| | || |||||| || ||| Sbjct 21070 TATGAAAATATAGTAT-AGCATAAGCTGAGGTGAGA-TGATCTGGGCTGCCACACCCGCC 21013 Query 560 A-CACTTACGGCTCAGACACTTCCAGTGGGAATAACAAGATGGCTGAC----GGCTCCTT 614 | || || | || | ||||||||| | || ||| ||| | | | || Sbjct 21012 ACCAATTTCCAATCGGGGACTTCCAGTAGCCAT----TTTTGGTCGACCATGGACCCGTT 20957 Query 615 GGATTCGTCTTGACGAGACGAATCGAATGAACCCAATCTCG 655 ||||||||||||||| || ||||| |||| || |||| || Sbjct 20956 GGATTCGTCTTGACGCGAGGAATCCGATGAGCCTAATCACG 20916 >seq9855 Length=15086 Score = 178 bits (196), Expect = 2e-41 Identities = 248/338 (73%), Gaps = 16/338 (5%) Strand=Plus/Minus Query 325 TGGCTGGCTAATTCCATT-CTAGATTCACCATAGCTTTAAATTATTTTTCGTGGCTGTGG 383 |||||| | ||||| | | ||||| | ||||||||| || ||||||| ||||||||||| Sbjct 3260 TGGCTGCC-AATTCTAGTACTAGACTTACCATAGCTCTATATTATTTCCCGTGGCTGTGG 3202 Query 384 tattatatatttaactctttatataatattatatatcttaaagaggtatttatatatgat 443 |||| ||||| |||||||||| |||| |||||||||||||||||||| || ||| || Sbjct 3201 TATTTTATATGTAACTCTTTACATAAGTTTATATATCTTAAAGAGGTA--TAAATAGCAT 3144 Query 444 ataatgctagtatatagctgggaatataGTGCTATA-AGTATAGCCTGTAAATGTTGTAC 502 ||| || || | |||| | ||| || ||||||| | |||||| |||| ||| || Sbjct 3143 ATAGTGTAAGCTAACAGCTAGAAATGTATTGCTATAGGGCATAGCCAATAAAAGTTATAT 3084 Query 503 GAATATAAAGTATAAGTATAAGCTGTGGAAAGATTGAAATTGGTTGCCACGCCTGCCA-C 561 ||| ||| ||||| || |||||||| || || ||| | || |||||| || |||| | Sbjct 3083 GAAAATATAGTAT-AGCATAAGCTGAGGTGTGA-TGATCTGGGCTGCCACACCCGCCACC 3026 Query 562 ACTTACGGCTCAGACACTTCCAGTGGGAATAACAAGATGGCTGAC----GGCTCCTTGGA 617 | || | || | ||||||||| | || ||| ||| | | | ||||| Sbjct 3025 AATTTCCAATCGGGGACTTCCAGTAGCCAT----TTTTGGTCGACCATGGACCCGTTGGA 2970 Query 618 TTCGTCTTGACGAGACGAATCGAATGAACCCAATCTCG 655 |||||||||||| || ||||| |||| || |||| || Sbjct 2969 TTCGTCTTGACGCGAGGAATCCGATGAGCCTAATCACG 2932 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8308121823302