Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Operophtera_20brumata_20[genbank_20GCA_5F001266575.1_202015-08-11]
25,801 sequences; 638,207,720 total letters
Query= NC_008885.1
Length=2641
Score E
Sequences producing significant alignments: (Bits) Value
seq2447 96.9 6e-17
seq6422 82.4 1e-12
seq9855 80.6 4e-12
>seq2447
Length=64305
Score = 96.9 bits (106), Expect = 6e-17
Identities = 113/151 (75%), Gaps = 4/151 (3%)
Strand=Plus/Minus
Query 1598 ATATATTTCTACTTATAATACCAGTGCTATTTACTATTCATATACCTCTTTAAGATAATT 1657
||| ||||||| |||| | ||| |||||| ||||| ||||||||||||||||| |
Sbjct 3275 ATACATTTCTAACTATATAGCTAGTTCTATTTCCTATT--TATACCTCTTTAAGATATAT 3218
Query 1658 ATAATTATTTAAAGAGTTATTAATAAAAGACCACAGCCACGGTAAATGAACTAATGCTAA 1717
| | |||||||||||||| ||||| ||||||||||| |||| || |||
Sbjct 3217 AAACTTATTTAAAGAGTTTGATATAAATAACCACAGCCACAAGAAATCGTATAGAGCT-- 3160
Query 1718 ATAGCAAATCAAGAATAGCGTTGTACGGCCA 1748
|||||||||| ||||||| | || | ||||
Sbjct 3159 ATAGCAAATCTAGAATAGAGATGGTCCGCCA 3129
>seq6422
Length=30189
Score = 82.4 bits (90), Expect = 1e-12
Identities = 88/114 (77%), Gaps = 3/114 (3%)
Strand=Plus/Plus
Query 1591 TATAGCTATATATTTCTACTTATAATACCAGTGCTATTTACTATTCATATACCTCTTTAA 1650
|||||| ||| ||||||| | | | | | |||| | ||||| |||||||||||||
Sbjct 21092 TATAGCAATACATTTCTAGCTGTTAGCTTA-TACTATATGCTATT--TATACCTCTTTAA 21148
Query 1651 GATAATTATAATTATTTAAAGAGTTATTAATAAAAGACCACAGCCACGGTAAAT 1704
|||| || | |||| |||||||||| |||||| ||||||||||||| ||||
Sbjct 21149 GATATATAAACTTATGTAAAGAGTTACATATAAAATACCACAGCCACGGGAAAT 21202
>seq9855
Length=15086
Score = 80.6 bits (88), Expect = 4e-12
Identities = 67/81 (83%), Gaps = 2/81 (2%)
Strand=Plus/Plus
Query 1624 CTATTTACTATTCATATACCTCTTTAAGATAATTATAATTATTTAAAGAGTTATTAATAA 1683
|||| | ||||| ||||||||||||||||| || | |||| |||||||||| ||||
Sbjct 3140 CTATATGCTATT--TATACCTCTTTAAGATATATAAACTTATGTAAAGAGTTACATATAA 3197
Query 1684 AAGACCACAGCCACGGTAAAT 1704
|| ||||||||||||| ||||
Sbjct 3198 AATACCACAGCCACGGGAAAT 3218
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 8340113050962
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |