Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Operophtera_20brumata_20[genbank_20GCA_5F001266575.1_202015-08-11] 25,801 sequences; 638,207,720 total letters Query= NC_008885.1 Length=2641 Score E Sequences producing significant alignments: (Bits) Value seq2447 96.9 6e-17 seq6422 82.4 1e-12 seq9855 80.6 4e-12 >seq2447 Length=64305 Score = 96.9 bits (106), Expect = 6e-17 Identities = 113/151 (75%), Gaps = 4/151 (3%) Strand=Plus/Minus Query 1598 ATATATTTCTACTTATAATACCAGTGCTATTTACTATTCATATACCTCTTTAAGATAATT 1657 ||| ||||||| |||| | ||| |||||| ||||| ||||||||||||||||| | Sbjct 3275 ATACATTTCTAACTATATAGCTAGTTCTATTTCCTATT--TATACCTCTTTAAGATATAT 3218 Query 1658 ATAATTATTTAAAGAGTTATTAATAAAAGACCACAGCCACGGTAAATGAACTAATGCTAA 1717 | | |||||||||||||| ||||| ||||||||||| |||| || ||| Sbjct 3217 AAACTTATTTAAAGAGTTTGATATAAATAACCACAGCCACAAGAAATCGTATAGAGCT-- 3160 Query 1718 ATAGCAAATCAAGAATAGCGTTGTACGGCCA 1748 |||||||||| ||||||| | || | |||| Sbjct 3159 ATAGCAAATCTAGAATAGAGATGGTCCGCCA 3129 >seq6422 Length=30189 Score = 82.4 bits (90), Expect = 1e-12 Identities = 88/114 (77%), Gaps = 3/114 (3%) Strand=Plus/Plus Query 1591 TATAGCTATATATTTCTACTTATAATACCAGTGCTATTTACTATTCATATACCTCTTTAA 1650 |||||| ||| ||||||| | | | | | |||| | ||||| ||||||||||||| Sbjct 21092 TATAGCAATACATTTCTAGCTGTTAGCTTA-TACTATATGCTATT--TATACCTCTTTAA 21148 Query 1651 GATAATTATAATTATTTAAAGAGTTATTAATAAAAGACCACAGCCACGGTAAAT 1704 |||| || | |||| |||||||||| |||||| ||||||||||||| |||| Sbjct 21149 GATATATAAACTTATGTAAAGAGTTACATATAAAATACCACAGCCACGGGAAAT 21202 >seq9855 Length=15086 Score = 80.6 bits (88), Expect = 4e-12 Identities = 67/81 (83%), Gaps = 2/81 (2%) Strand=Plus/Plus Query 1624 CTATTTACTATTCATATACCTCTTTAAGATAATTATAATTATTTAAAGAGTTATTAATAA 1683 |||| | ||||| ||||||||||||||||| || | |||| |||||||||| |||| Sbjct 3140 CTATATGCTATT--TATACCTCTTTAAGATATATAAACTTATGTAAAGAGTTACATATAA 3197 Query 1684 AAGACCACAGCCACGGTAAAT 1704 || ||||||||||||| |||| Sbjct 3198 AATACCACAGCCACGGGAAAT 3218 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8340113050962