Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Operophtera_20brumata_20[genbank_20GCA_5F001266575.1_202015-08-11] 25,801 sequences; 638,207,720 total letters Query= NC_008889.1 Length=2738 Score E Sequences producing significant alignments: (Bits) Value seq6422 156 7e-35 seq9855 152 9e-34 >seq6422 Length=30189 Score = 156 bits (172), Expect = 7e-35 Identities = 148/189 (78%), Gaps = 1/189 (1%) Strand=Plus/Plus Query 1916 ACTATATATTTATTTAGCTCATAGTGTctatgcactatagcaatatatctttcgctatat 1975 ||||||| || || || || || || |||||| ||||||||||| || | | ||| | | Sbjct 21057 ACTATATTTTCATATAACTTTTATTGGCTATGCCCTATAGCAATACATTTCTAGCTGT-T 21115 Query 1976 agctaatattatattnnnnttatacctatttaaaaaatatataattatgaaaagagttat 2035 |||| ||| ||||| |||||||| ||||| | ||||| | ||||| ||||||||| Sbjct 21116 AGCTTATACTATATGCTATTTATACCTCTTTAAGATATATAAACTTATGTAAAGAGTTAC 21175 Query 2036 atataaaaCACCACAGCCAACGGAAATAATATAAGACTATAGGAAATCTAGTATTGCAAT 2095 |||||||| |||||||||| |||||||||||| |||| | || ||||||| | ||| Sbjct 21176 ATATAAAATACCACAGCCACGGGAAATAATATAGAGCTATGGTAAGTCTAGTACTAGAAT 21235 Query 2096 TGGCAGCCA 2104 ||||||||| Sbjct 21236 TGGCAGCCA 21244 >seq9855 Length=15086 Score = 152 bits (168), Expect = 9e-34 Identities = 147/189 (78%), Gaps = 1/189 (1%) Strand=Plus/Plus Query 1916 ACTATATATTTATTTAGCTCATAGTGTctatgcactatagcaatatatctttcgctatat 1975 ||||||| || || || || || || |||||| ||||||||||| || | | ||| | | Sbjct 3073 ACTATATTTTCATATAACTTTTATTGGCTATGCCCTATAGCAATACATTTCTAGCTGT-T 3131 Query 1976 agctaatattatattnnnnttatacctatttaaaaaatatataattatgaaaagagttat 2035 |||| | | ||||| |||||||| ||||| | ||||| | ||||| ||||||||| Sbjct 3132 AGCTTACACTATATGCTATTTATACCTCTTTAAGATATATAAACTTATGTAAAGAGTTAC 3191 Query 2036 atataaaaCACCACAGCCAACGGAAATAATATAAGACTATAGGAAATCTAGTATTGCAAT 2095 |||||||| |||||||||| |||||||||||| |||| | || ||||||| | ||| Sbjct 3192 ATATAAAATACCACAGCCACGGGAAATAATATAGAGCTATGGTAAGTCTAGTACTAGAAT 3251 Query 2096 TGGCAGCCA 2104 ||||||||| Sbjct 3252 TGGCAGCCA 3260 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8650427959264