Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Operophtera_20brumata_20[genbank_20GCA_5F001266575.1_202015-08-11]
25,801 sequences; 638,207,720 total letters
Query= NC_008890.1
Length=2768
Score E
Sequences producing significant alignments: (Bits) Value
seq6422 156 7e-35
seq9855 154 3e-34
>seq6422
Length=30189
Score = 156 bits (172), Expect = 7e-35
Identities = 271/387 (70%), Gaps = 13/387 (3%)
Strand=Plus/Minus
Query 2085 GCTGAATTGGCGAGCATGGCTGTCAAATCTCATTCTAGATTCACCATAGCTTTAAATTAT 2144
||||| ||| | | |||||| ||| ||| | ||||| | ||||||||| || |||||
Sbjct 21260 GCTGATGTGGTAAACGTGGCTGCCAATTCTAGTACTAGACTTACCATAGCTCTATATTAT 21201
Query 2145 TTTTCGTGGCTGTGGtatcttatttataactctttgtataatattatttatcttaaagag 2204
|| |||||||||||||| |||| | ||||||||| |||| |||| ||||||||||||
Sbjct 21200 TTCCCGTGGCTGTGGTATTTTATATGTAACTCTTTACATAAGTTTATATATCTTAAAGAG 21141
Query 2205 gtatatat---atatgatataaatctagcatatagctaggaatatattgctata-agtat 2260
||||| || |||| |||| ||| | |||||| ||| |||||||||| | ||
Sbjct 21140 GTATAAATAGCATATAGTATA-----AGCTAACAGCTAGAAATGTATTGCTATAGGGCAT 21086
Query 2261 agCCAGTAAATGCTGTACGAAGTATAACGTATAAGTATAAGCTGTGCTAAGATTGAAATT 2320
||||| |||| | | || ||| ||| |||| || |||||||| | | ||| ||| |
Sbjct 21085 AGCCAATAAAAGTTATATGAA-AATATAGTAT-AGCATAAGCTGAGGTGAGA-TGATCTG 21029
Query 2321 GTCGGCCACGCTCGCCA-CATTTACGTCTCAGACACTTTCAGTGGAAATAATAAGATGGC 2379
| | ||||| | ||||| || || | || | |||| |||| | || | | | |
Sbjct 21028 GGCTGCCACACCCGCCACCAATTTCCAATCGGGGACTTCCAGTAGCCATTTTTGGTCGAC 20969
Query 2380 CGATGACTCGTTGAATTCCTCTCGACGAGCCAAGTCGAATGAGCCCTATCCCCAGAGTGT 2439
| ||| ||||| |||| ||| |||| | | || ||||||| ||| | ||| ||
Sbjct 20968 CATGGACCCGTTGGATTCGTCTTGACGCGAGGAATCCGATGAGCCTAATCACGGGAGGGT 20909
Query 2440 TACCATTATGGATGGGTTTTCACAACC 2466
||| | | || | ||| ||||||
Sbjct 20908 GACCTTGAAGGGTAACTTTCTACAACC 20882
>seq9855
Length=15086
Score = 154 bits (170), Expect = 3e-34
Identities = 269/384 (70%), Gaps = 7/384 (2%)
Strand=Plus/Minus
Query 2085 GCTGAATTGGCGAGCATGGCTGTCAAATCTCATTCTAGATTCACCATAGCTTTAAATTAT 2144
||||| |||| | | |||||| ||| ||| | ||||| | ||||||||| || |||||
Sbjct 3276 GCTGATGTGGCAAACGTGGCTGCCAATTCTAGTACTAGACTTACCATAGCTCTATATTAT 3217
Query 2145 TTTTCGTGGCTGTGGtatcttatttataactctttgtataatattatttatcttaaagag 2204
|| |||||||||||||| |||| | ||||||||| |||| |||| ||||||||||||
Sbjct 3216 TTCCCGTGGCTGTGGTATTTTATATGTAACTCTTTACATAAGTTTATATATCTTAAAGAG 3157
Query 2205 gtatatatatatgatataaatctagcatatagctaggaatatattgctata-agtatagC 2263
| |||| ||| ||||| ||| | |||||| ||| |||||||||| | |||||
Sbjct 3156 G--TATAAATAGCATATAGTGTAAGCTAACAGCTAGAAATGTATTGCTATAGGGCATAGC 3099
Query 2264 CAGTAAATGCTGTACGAAGTATAACGTATAAGTATAAGCTGTGCTAAGATTGAAATTGTC 2323
|| |||| | | || ||| ||| |||| || |||||||| | | || ||| | | |
Sbjct 3098 CAATAAAAGTTATATGAA-AATATAGTAT-AGCATAAGCTGAGGTGTGA-TGATCTGGGC 3042
Query 2324 GGCCACGCTCGCCA-CATTTACGTCTCAGACACTTTCAGTGGAAATAATAAGATGGCCGA 2382
||||| | ||||| || || | || | |||| |||| | || | | | ||
Sbjct 3041 TGCCACACCCGCCACCAATTTCCAATCGGGGACTTCCAGTAGCCATTTTTGGTCGACCAT 2982
Query 2383 TGACTCGTTGAATTCCTCTCGACGAGCCAAGTCGAATGAGCCCTATCCCCAGAGTGTTAC 2442
||| ||||| |||| ||| |||| | | || ||||||| ||| | ||| || ||
Sbjct 2981 GGACCCGTTGGATTCGTCTTGACGCGAGGAATCCGATGAGCCTAATCACGGGAGGGTGAC 2922
Query 2443 CATTATGGATGGGTTTTCACAACC 2466
| | | || | ||| ||||||
Sbjct 2921 CTTGAAGGGTAACTTTCTACAACC 2898
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 8743132005345
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |