Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Operophtera_20brumata_20[genbank_20GCA_5F001266575.1_202015-08-11] 25,801 sequences; 638,207,720 total letters Query= NC_008890.1 Length=2768 Score E Sequences producing significant alignments: (Bits) Value seq6422 156 7e-35 seq9855 154 3e-34 >seq6422 Length=30189 Score = 156 bits (172), Expect = 7e-35 Identities = 271/387 (70%), Gaps = 13/387 (3%) Strand=Plus/Minus Query 2085 GCTGAATTGGCGAGCATGGCTGTCAAATCTCATTCTAGATTCACCATAGCTTTAAATTAT 2144 ||||| ||| | | |||||| ||| ||| | ||||| | ||||||||| || ||||| Sbjct 21260 GCTGATGTGGTAAACGTGGCTGCCAATTCTAGTACTAGACTTACCATAGCTCTATATTAT 21201 Query 2145 TTTTCGTGGCTGTGGtatcttatttataactctttgtataatattatttatcttaaagag 2204 || |||||||||||||| |||| | ||||||||| |||| |||| |||||||||||| Sbjct 21200 TTCCCGTGGCTGTGGTATTTTATATGTAACTCTTTACATAAGTTTATATATCTTAAAGAG 21141 Query 2205 gtatatat---atatgatataaatctagcatatagctaggaatatattgctata-agtat 2260 ||||| || |||| |||| ||| | |||||| ||| |||||||||| | || Sbjct 21140 GTATAAATAGCATATAGTATA-----AGCTAACAGCTAGAAATGTATTGCTATAGGGCAT 21086 Query 2261 agCCAGTAAATGCTGTACGAAGTATAACGTATAAGTATAAGCTGTGCTAAGATTGAAATT 2320 ||||| |||| | | || ||| ||| |||| || |||||||| | | ||| ||| | Sbjct 21085 AGCCAATAAAAGTTATATGAA-AATATAGTAT-AGCATAAGCTGAGGTGAGA-TGATCTG 21029 Query 2321 GTCGGCCACGCTCGCCA-CATTTACGTCTCAGACACTTTCAGTGGAAATAATAAGATGGC 2379 | | ||||| | ||||| || || | || | |||| |||| | || | | | | Sbjct 21028 GGCTGCCACACCCGCCACCAATTTCCAATCGGGGACTTCCAGTAGCCATTTTTGGTCGAC 20969 Query 2380 CGATGACTCGTTGAATTCCTCTCGACGAGCCAAGTCGAATGAGCCCTATCCCCAGAGTGT 2439 | ||| ||||| |||| ||| |||| | | || ||||||| ||| | ||| || Sbjct 20968 CATGGACCCGTTGGATTCGTCTTGACGCGAGGAATCCGATGAGCCTAATCACGGGAGGGT 20909 Query 2440 TACCATTATGGATGGGTTTTCACAACC 2466 ||| | | || | ||| |||||| Sbjct 20908 GACCTTGAAGGGTAACTTTCTACAACC 20882 >seq9855 Length=15086 Score = 154 bits (170), Expect = 3e-34 Identities = 269/384 (70%), Gaps = 7/384 (2%) Strand=Plus/Minus Query 2085 GCTGAATTGGCGAGCATGGCTGTCAAATCTCATTCTAGATTCACCATAGCTTTAAATTAT 2144 ||||| |||| | | |||||| ||| ||| | ||||| | ||||||||| || ||||| Sbjct 3276 GCTGATGTGGCAAACGTGGCTGCCAATTCTAGTACTAGACTTACCATAGCTCTATATTAT 3217 Query 2145 TTTTCGTGGCTGTGGtatcttatttataactctttgtataatattatttatcttaaagag 2204 || |||||||||||||| |||| | ||||||||| |||| |||| |||||||||||| Sbjct 3216 TTCCCGTGGCTGTGGTATTTTATATGTAACTCTTTACATAAGTTTATATATCTTAAAGAG 3157 Query 2205 gtatatatatatgatataaatctagcatatagctaggaatatattgctata-agtatagC 2263 | |||| ||| ||||| ||| | |||||| ||| |||||||||| | ||||| Sbjct 3156 G--TATAAATAGCATATAGTGTAAGCTAACAGCTAGAAATGTATTGCTATAGGGCATAGC 3099 Query 2264 CAGTAAATGCTGTACGAAGTATAACGTATAAGTATAAGCTGTGCTAAGATTGAAATTGTC 2323 || |||| | | || ||| ||| |||| || |||||||| | | || ||| | | | Sbjct 3098 CAATAAAAGTTATATGAA-AATATAGTAT-AGCATAAGCTGAGGTGTGA-TGATCTGGGC 3042 Query 2324 GGCCACGCTCGCCA-CATTTACGTCTCAGACACTTTCAGTGGAAATAATAAGATGGCCGA 2382 ||||| | ||||| || || | || | |||| |||| | || | | | || Sbjct 3041 TGCCACACCCGCCACCAATTTCCAATCGGGGACTTCCAGTAGCCATTTTTGGTCGACCAT 2982 Query 2383 TGACTCGTTGAATTCCTCTCGACGAGCCAAGTCGAATGAGCCCTATCCCCAGAGTGTTAC 2442 ||| ||||| |||| ||| |||| | | || ||||||| ||| | ||| || || Sbjct 2981 GGACCCGTTGGATTCGTCTTGACGCGAGGAATCCGATGAGCCTAATCACGGGAGGGTGAC 2922 Query 2443 CATTATGGATGGGTTTTCACAACC 2466 | | | || | ||| |||||| Sbjct 2921 CTTGAAGGGTAACTTTCTACAACC 2898 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8743132005345