Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Operophtera_20brumata_20[genbank_20GCA_5F001266575.1_202015-08-11] 25,801 sequences; 638,207,720 total letters Query= NC_008892.1 Length=2785 Score E Sequences producing significant alignments: (Bits) Value seq9855 109 1e-20 seq6422 109 1e-20 seq2447 98.7 2e-17 >seq9855 Length=15086 Score = 109 bits (120), Expect = 1e-20 Identities = 68/73 (93%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 2403 TATACCTCTTTAAGATATATAAACTTATTTAAAGAGTTCAATATAAAATACCACAGCCAC 2462 |||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||| Sbjct 3152 TATACCTCTTTAAGATATATAAACTTATGTAAAGAGTTACATATAAAATACCACAGCCAC 3211 Query 2463 GCGAAATAATCTA 2475 | |||||||| || Sbjct 3212 GGGAAATAATATA 3224 >seq6422 Length=30189 Score = 109 bits (120), Expect = 1e-20 Identities = 68/73 (93%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 2403 TATACCTCTTTAAGATATATAAACTTATTTAAAGAGTTCAATATAAAATACCACAGCCAC 2462 |||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||| Sbjct 21136 TATACCTCTTTAAGATATATAAACTTATGTAAAGAGTTACATATAAAATACCACAGCCAC 21195 Query 2463 GCGAAATAATCTA 2475 | |||||||| || Sbjct 21196 GGGAAATAATATA 21208 >seq2447 Length=64305 Score = 98.7 bits (108), Expect = 2e-17 Identities = 81/99 (82%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 2403 TATACCTCTTTAAGATATATAAACTTATTTAAAGAGTTCAATATAAAATACCACAGCCAC 2462 |||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||| Sbjct 3237 TATACCTCTTTAAGATATATAAACTTATTTAAAGAGTTTGATATAAATAACCACAGCCAC 3178 Query 2463 GCGAAATAATCTAAGCCTGTAGAAAATTAAGGATACAGA 2501 ||||| | || || ||| |||| || ||| ||| Sbjct 3177 AAGAAATCGTATAGAGCTATAGCAAATCTAGAATAGAGA 3139 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8797516653750