Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Operophtera_20brumata_20[genbank_20GCA_5F001266575.1_202015-08-11]
25,801 sequences; 638,207,720 total letters
Query= NC_008894.1
Length=2819
Score E
Sequences producing significant alignments: (Bits) Value
seq2447 132 9e-28
seq6422 116 7e-23
seq9855 113 8e-22
seq1896 104 4e-19
>seq2447
Length=64305
Score = 132 bits (146), Expect = 9e-28
Identities = 105/123 (85%), Gaps = 5/123 (4%)
Strand=Plus/Minus
Query 282 CTAGCTCTATAGCTAGTCCTATATTCCTATTTATACCTCTTTAAGATATATAAACTTATT 341
||| || |||||||||| |||| |||||||||||||||||||||||||||||||||||||
Sbjct 3267 CTAACTATATAGCTAGTTCTAT-TTCCTATTTATACCTCTTTAAGATATATAAACTTATT 3209
Query 342 TAAAGAGTT--AAATAAATAATACCACAGCCACAAAAAATTATATAAATTCATAGTAATT 399
||||||||| | |||||||| |||||||||||| |||| |||| | |||| || |
Sbjct 3208 TAAAGAGTTTGATATAAATAA--CCACAGCCACAAGAAATCGTATAGAGCTATAGCAAAT 3151
Query 400 CTA 402
|||
Sbjct 3150 CTA 3148
>seq6422
Length=30189
Score = 116 bits (128), Expect = 7e-23
Identities = 100/121 (83%), Gaps = 2/121 (2%)
Strand=Plus/Plus
Query 282 CTAGCTCTATAGCTAGTCCTATATTCCTATTTATACCTCTTTAAGATATATAAACTTATT 341
|||||| | ||||| | |||||| | ||||||||||||||||||||||||||||||||
Sbjct 21107 CTAGCTGT-TAGCTTATACTATATGC-TATTTATACCTCTTTAAGATATATAAACTTATG 21164
Query 342 TAAAGAGTTAAATAAATAATACCACAGCCACAAAAAATTATATAAATTCATAGTAATTCT 401
|||||||||| ||| | |||||||||||||| |||| ||||| | || |||| |||
Sbjct 21165 TAAAGAGTTACATATAAAATACCACAGCCACGGGAAATAATATAGAGCTATGGTAAGTCT 21224
Query 402 A 402
|
Sbjct 21225 A 21225
>seq9855
Length=15086
Score = 113 bits (124), Expect = 8e-22
Identities = 99/121 (82%), Gaps = 2/121 (2%)
Strand=Plus/Plus
Query 282 CTAGCTCTATAGCTAGTCCTATATTCCTATTTATACCTCTTTAAGATATATAAACTTATT 341
|||||| | ||||| |||||| | ||||||||||||||||||||||||||||||||
Sbjct 3123 CTAGCTGT-TAGCTTACACTATATGC-TATTTATACCTCTTTAAGATATATAAACTTATG 3180
Query 342 TAAAGAGTTAAATAAATAATACCACAGCCACAAAAAATTATATAAATTCATAGTAATTCT 401
|||||||||| ||| | |||||||||||||| |||| ||||| | || |||| |||
Sbjct 3181 TAAAGAGTTACATATAAAATACCACAGCCACGGGAAATAATATAGAGCTATGGTAAGTCT 3240
Query 402 A 402
|
Sbjct 3241 A 3241
>seq1896
Length=105120
Score = 104 bits (114), Expect = 4e-19
Identities = 101/129 (78%), Gaps = 11/129 (9%)
Strand=Plus/Plus
Query 283 TAGCTCTATAGCTAGTCCTATATTCCTATTTATACCTCTTTAAGATATA----TAAACTT 338
||| ||| |||||||| ||||| ||||||||| || ||| |||||||| |||| ||
Sbjct 45647 TAGGTCTCTAGCTAGTGCTATAACCCTATTTATTCCCCTTCAAGATATAAGTATAAAATT 45706
Query 339 ATTTAAAGAGTTAAATAAATAATACCACAGCCACAAAAAATTATATAAATTCATAGTAAT 398
||||||| ||||| ||||||||||||||| |||||||||||| |||||||
Sbjct 45707 ATTTAAACT-----ATAAA--ATACCACAGCCACAAGAAATTATATAAAGCTATAGTAAA 45759
Query 399 TCTAAGATA 407
|||| ||||
Sbjct 45760 TCTAGGATA 45768
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 8906285950560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |