Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Operophtera_20brumata_20[genbank_20GCA_5F001266575.1_202015-08-11]
25,801 sequences; 638,207,720 total letters
Query= NC_008895.1
Length=2854
Score E
Sequences producing significant alignments: (Bits) Value
seq9855 149 1e-32
seq6422 149 1e-32
seq2447 116 7e-23
>seq9855
Length=15086
Score = 149 bits (164), Expect = 1e-32
Identities = 179/242 (74%), Gaps = 4/242 (2%)
Strand=Plus/Minus
Query 1397 GTGGCAGCCAAATCTCATACTAGAATTACTATAGCGCTATACGATTCTTCGTGGCTTTGG 1456
||||| ||||| ||| ||||||| |||| ||||| ||||| ||| ||||||| |||
Sbjct 3261 GTGGCTGCCAATTCTAGTACTAGACTTACCATAGCTCTATATTATTTCCCGTGGCTGTGG 3202
Query 1457 TTATTTATATGTAACTCTTTAAATAAGTTTATTTATCTTAAAGGGataaatatagcatat 1516
| |||||||||||||||||| |||||||||| |||||||||| | || | |||||||||
Sbjct 3201 TATTTTATATGTAACTCTTTACATAAGTTTATATATCTTAAAGAGGTATAAATAGCATAT 3142
Query 1517 aatgataataatataggtaggagtatatagC-NNNNNNNNNNNCCGATAAAAGCTATGTA 1575
| || ||| | || ||| | | ||| || || ||||||| ||| |
Sbjct 3141 AGTG-TAAGCTAACAGCTAGAAATGTATTGCTATAGGGCATAGCCAATAAAAGTTATATG 3083
Query 1576 AAAATATAGTATGAGCATAAGCTAAGGCGGGATAGAAATAACACGCCACACCTGCCACAA 1635
|||||||||||| |||||||||| ||| | ||| || | |||||||| ||||| |
Sbjct 3082 AAAATATAGTAT-AGCATAAGCTGAGGTGTGAT-GATCTGGGCTGCCACACCCGCCACCA 3025
Query 1636 AT 1637
||
Sbjct 3024 AT 3023
>seq6422
Length=30189
Score = 149 bits (164), Expect = 1e-32
Identities = 179/242 (74%), Gaps = 4/242 (2%)
Strand=Plus/Minus
Query 1397 GTGGCAGCCAAATCTCATACTAGAATTACTATAGCGCTATACGATTCTTCGTGGCTTTGG 1456
||||| ||||| ||| ||||||| |||| ||||| ||||| ||| ||||||| |||
Sbjct 21245 GTGGCTGCCAATTCTAGTACTAGACTTACCATAGCTCTATATTATTTCCCGTGGCTGTGG 21186
Query 1457 TTATTTATATGTAACTCTTTAAATAAGTTTATTTATCTTAAAGGGataaatatagcatat 1516
| |||||||||||||||||| |||||||||| |||||||||| | || | |||||||||
Sbjct 21185 TATTTTATATGTAACTCTTTACATAAGTTTATATATCTTAAAGAGGTATAAATAGCATAT 21126
Query 1517 aatgataataatataggtaggagtatatagC-NNNNNNNNNNNCCGATAAAAGCTATGTA 1575
| | |||| | || ||| | | ||| || || ||||||| ||| |
Sbjct 21125 AGT-ATAAGCTAACAGCTAGAAATGTATTGCTATAGGGCATAGCCAATAAAAGTTATATG 21067
Query 1576 AAAATATAGTATGAGCATAAGCTAAGGCGGGATAGAAATAACACGCCACACCTGCCACAA 1635
|||||||||||| |||||||||| ||| | ||| || | |||||||| ||||| |
Sbjct 21066 AAAATATAGTAT-AGCATAAGCTGAGGTGAGAT-GATCTGGGCTGCCACACCCGCCACCA 21009
Query 1636 AT 1637
||
Sbjct 21008 AT 21007
>seq2447
Length=64305
Score = 116 bits (128), Expect = 7e-23
Identities = 93/111 (84%), Gaps = 1/111 (1%)
Strand=Plus/Plus
Query 1408 ATCTC-ATACTAGAATTACTATAGCGCTATACGATTCTTCGTGGCTTTGGTTATTTATAT 1466
||||| || ||||| || ||||||| |||||||||| | |||||| |||||||||||||
Sbjct 3138 ATCTCTATTCTAGATTTGCTATAGCTCTATACGATTTCTTGTGGCTGTGGTTATTTATAT 3197
Query 1467 GTAACTCTTTAAATAAGTTTATTTATCTTAAAGGGataaatatagcatata 1517
|||||||||||||||||||| |||||||||| | || | |||| | |||
Sbjct 3198 CAAACTCTTTAAATAAGTTTATATATCTTAAAGAGGTATAAATAGGAAATA 3248
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 9018254344335
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |