Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Operophtera_20brumata_20[genbank_20GCA_5F001266575.1_202015-08-11] 25,801 sequences; 638,207,720 total letters Query= NC_008896.1 Length=2856 Score E Sequences producing significant alignments: (Bits) Value seq6422 134 2e-28 seq2447 132 9e-28 seq9855 129 1e-26 >seq6422 Length=30189 Score = 134 bits (148), Expect = 2e-28 Identities = 118/146 (81%), Gaps = 1/146 (1%) Strand=Plus/Minus Query 2698 TTTTATTTCTAGATTTTCTATAGCCTTATACGATTTCCCATGGCTGTGGTATTTTATATG 2757 || || | ||||| || | ||||| |||| ||||||| |||||||||||||||||||| Sbjct 21234 TTCTAGTACTAGACTTACCATAGCTCTATATTATTTCCCGTGGCTGTGGTATTTTATATG 21175 Query 2758 TAACTCTTTAAATAAAGTtatatatcttaaagaggtatatgaaagatataggaatagcta 2817 |||||||||| |||| |||||||||||||||||||||| | |||||| | ||||| Sbjct 21174 TAACTCTTTACATAAGTTTATATATCTTAAAGAGGTATAAATAGCATATAGTATAAGCTA 21115 Query 2818 tatagcaaggaatatatagctatagG 2843 | ||| || ||| ||| |||||||| Sbjct 21114 -ACAGCTAGAAATGTATTGCTATAGG 21090 >seq2447 Length=64305 Score = 132 bits (146), Expect = 9e-28 Identities = 108/131 (82%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 2704 TTCTAGATTTTCTATAGCCTTATACGATTTCCCATGGCTGTGGTATTTTATATGTAACTC 2763 |||||||||| ||||||| ||||||||||| |||||||||| ||||||| ||||| Sbjct 3145 TTCTAGATTTGCTATAGCTCTATACGATTTCTTGTGGCTGTGGTTATTTATATCAAACTC 3204 Query 2764 TTTAAATAAAGTtatatatcttaaagaggtatatgaaagatataggaatagctatatagc 2823 ||||||||| |||||||||||||||||||||| | || |||| | ||||||||||| Sbjct 3205 TTTAAATAAGTTTATATATCTTAAAGAGGTATAAATAGGAAATAGAACTAGCTATATAGT 3264 Query 2824 aaggaatatat 2834 || ||| ||| Sbjct 3265 TAGAAATGTAT 3275 >seq9855 Length=15086 Score = 129 bits (142), Expect = 1e-26 Identities = 117/146 (80%), Gaps = 1/146 (1%) Strand=Plus/Minus Query 2698 TTTTATTTCTAGATTTTCTATAGCCTTATACGATTTCCCATGGCTGTGGTATTTTATATG 2757 || || | ||||| || | ||||| |||| ||||||| |||||||||||||||||||| Sbjct 3250 TTCTAGTACTAGACTTACCATAGCTCTATATTATTTCCCGTGGCTGTGGTATTTTATATG 3191 Query 2758 TAACTCTTTAAATAAAGTtatatatcttaaagaggtatatgaaagatataggaatagcta 2817 |||||||||| |||| |||||||||||||||||||||| | |||||| ||||| Sbjct 3190 TAACTCTTTACATAAGTTTATATATCTTAAAGAGGTATAAATAGCATATAGTGTAAGCTA 3131 Query 2818 tatagcaaggaatatatagctatagG 2843 | ||| || ||| ||| |||||||| Sbjct 3130 -ACAGCTAGAAATGTATTGCTATAGG 3106 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 9024652538265