Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Operophtera_20brumata_20[genbank_20GCA_5F001266575.1_202015-08-11]
25,801 sequences; 638,207,720 total letters
Query= NC_008896.1
Length=2856
Score E
Sequences producing significant alignments: (Bits) Value
seq6422 134 2e-28
seq2447 132 9e-28
seq9855 129 1e-26
>seq6422
Length=30189
Score = 134 bits (148), Expect = 2e-28
Identities = 118/146 (81%), Gaps = 1/146 (1%)
Strand=Plus/Minus
Query 2698 TTTTATTTCTAGATTTTCTATAGCCTTATACGATTTCCCATGGCTGTGGTATTTTATATG 2757
|| || | ||||| || | ||||| |||| ||||||| ||||||||||||||||||||
Sbjct 21234 TTCTAGTACTAGACTTACCATAGCTCTATATTATTTCCCGTGGCTGTGGTATTTTATATG 21175
Query 2758 TAACTCTTTAAATAAAGTtatatatcttaaagaggtatatgaaagatataggaatagcta 2817
|||||||||| |||| |||||||||||||||||||||| | |||||| | |||||
Sbjct 21174 TAACTCTTTACATAAGTTTATATATCTTAAAGAGGTATAAATAGCATATAGTATAAGCTA 21115
Query 2818 tatagcaaggaatatatagctatagG 2843
| ||| || ||| ||| ||||||||
Sbjct 21114 -ACAGCTAGAAATGTATTGCTATAGG 21090
>seq2447
Length=64305
Score = 132 bits (146), Expect = 9e-28
Identities = 108/131 (82%), Gaps = 0/131 (0%)
Strand=Plus/Plus
Query 2704 TTCTAGATTTTCTATAGCCTTATACGATTTCCCATGGCTGTGGTATTTTATATGTAACTC 2763
|||||||||| ||||||| ||||||||||| |||||||||| ||||||| |||||
Sbjct 3145 TTCTAGATTTGCTATAGCTCTATACGATTTCTTGTGGCTGTGGTTATTTATATCAAACTC 3204
Query 2764 TTTAAATAAAGTtatatatcttaaagaggtatatgaaagatataggaatagctatatagc 2823
||||||||| |||||||||||||||||||||| | || |||| | |||||||||||
Sbjct 3205 TTTAAATAAGTTTATATATCTTAAAGAGGTATAAATAGGAAATAGAACTAGCTATATAGT 3264
Query 2824 aaggaatatat 2834
|| ||| |||
Sbjct 3265 TAGAAATGTAT 3275
>seq9855
Length=15086
Score = 129 bits (142), Expect = 1e-26
Identities = 117/146 (80%), Gaps = 1/146 (1%)
Strand=Plus/Minus
Query 2698 TTTTATTTCTAGATTTTCTATAGCCTTATACGATTTCCCATGGCTGTGGTATTTTATATG 2757
|| || | ||||| || | ||||| |||| ||||||| ||||||||||||||||||||
Sbjct 3250 TTCTAGTACTAGACTTACCATAGCTCTATATTATTTCCCGTGGCTGTGGTATTTTATATG 3191
Query 2758 TAACTCTTTAAATAAAGTtatatatcttaaagaggtatatgaaagatataggaatagcta 2817
|||||||||| |||| |||||||||||||||||||||| | |||||| |||||
Sbjct 3190 TAACTCTTTACATAAGTTTATATATCTTAAAGAGGTATAAATAGCATATAGTGTAAGCTA 3131
Query 2818 tatagcaaggaatatatagctatagG 2843
| ||| || ||| ||| ||||||||
Sbjct 3130 -ACAGCTAGAAATGTATTGCTATAGG 3106
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 9024652538265
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |