Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Operophtera_20brumata_20[genbank_20GCA_5F001266575.1_202015-08-11]
25,801 sequences; 638,207,720 total letters
Query= NC_008900.1
Length=2924
Score E
Sequences producing significant alignments: (Bits) Value
seq9855 154 3e-34
seq6422 154 3e-34
seq2447 152 9e-34
seq1896 93.3 8e-16
seq1668 77.0 6e-11
>seq9855
Length=15086
Score = 154 bits (170), Expect = 3e-34
Identities = 191/251 (76%), Gaps = 13/251 (5%)
Strand=Plus/Plus
Query 1619 GTGGCGGGTTTGGCAGCC-AGTTCCAATCCCATCAGAGCTTATGCTA----AT-TACTCG 1672
||||||||| |||||||| || || ||| || | ||||||||||| || | ||
Sbjct 3027 GTGGCGGGTGTGGCAGCCCAGATC--ATCACACCTCAGCTTATGCTATACTATATTTTCA 3084
Query 1673 CTTAGCCTCTATCGGCTGTACT-TATAGCGATACATTCCTGCCTACATAGCTAATGCTTA 1731
|| | | ||| |||| | | |||||| ||||||| || || ||||| | || |
Sbjct 3085 TATAACTTTTATTGGCTATGCCCTATAGCAATACATTTCTAGCTGT-TAGCTTACACT-A 3142
Query 1732 TATCCTATATTTACCTCTTTAAGATATATAAACTTATTTAAAGAGTTAAATATAAAATAC 1791
||| |||| | |||||||||||||||||||||||||| |||||||||| |||||||||||
Sbjct 3143 TATGCTATTTATACCTCTTTAAGATATATAAACTTATGTAAAGAGTTACATATAAAATAC 3202
Query 1792 CACAGCCACAGGAAATTCTATAGTTCTATAGAAAATCTAG-AATAGAAATATGCAGCCTC 1850
||||||||| |||||| ||||| |||| | || ||||| | ||| ||| |||||| |
Sbjct 3203 CACAGCCACGGGAAATAATATAGAGCTATGGTAAGTCTAGTACTAG-AATTGGCAGCCAC 3261
Query 1851 AGCTGCCACAT 1861
||||||||
Sbjct 3262 GTTTGCCACAT 3272
>seq6422
Length=30189
Score = 154 bits (170), Expect = 3e-34
Identities = 191/251 (76%), Gaps = 13/251 (5%)
Strand=Plus/Plus
Query 1619 GTGGCGGGTTTGGCAGCC-AGTTCCAATCCCATCAGAGCTTATGCTA----AT-TACTCG 1672
||||||||| |||||||| || || ||| || | ||||||||||| || | ||
Sbjct 21011 GTGGCGGGTGTGGCAGCCCAGATC--ATCTCACCTCAGCTTATGCTATACTATATTTTCA 21068
Query 1673 CTTAGCCTCTATCGGCTGTACT-TATAGCGATACATTCCTGCCTACATAGCTAATGCTTA 1731
|| | | ||| |||| | | |||||| ||||||| || || ||||| || || |
Sbjct 21069 TATAACTTTTATTGGCTATGCCCTATAGCAATACATTTCTAGCTGT-TAGCTTATACT-A 21126
Query 1732 TATCCTATATTTACCTCTTTAAGATATATAAACTTATTTAAAGAGTTAAATATAAAATAC 1791
||| |||| | |||||||||||||||||||||||||| |||||||||| |||||||||||
Sbjct 21127 TATGCTATTTATACCTCTTTAAGATATATAAACTTATGTAAAGAGTTACATATAAAATAC 21186
Query 1792 CACAGCCACAGGAAATTCTATAGTTCTATAGAAAATCTAG-AATAGAAATATGCAGCCTC 1850
||||||||| |||||| ||||| |||| | || ||||| | ||| ||| |||||| |
Sbjct 21187 CACAGCCACGGGAAATAATATAGAGCTATGGTAAGTCTAGTACTAG-AATTGGCAGCCAC 21245
Query 1851 AGCTGCCACAT 1861
| ||||||
Sbjct 21246 GTTTACCACAT 21256
>seq2447
Length=64305
Score = 152 bits (168), Expect = 9e-34
Identities = 118/139 (85%), Gaps = 1/139 (1%)
Strand=Plus/Minus
Query 1702 ATACATTCCTGCCTACATAGCTAATGCTTATATCCTATATTTACCTCTTTAAGATATATA 1761
||||||| || ||| ||||||| | || || |||||| | |||||||||||||||||||
Sbjct 3275 ATACATTTCTAACTATATAGCTAGTTCT-ATTTCCTATTTATACCTCTTTAAGATATATA 3217
Query 1762 AACTTATTTAAAGAGTTAAATATAAAATACCACAGCCACAGGAAATTCTATAGTTCTATA 1821
||||||||||||||||| ||||||| |||||||||||| ||||| ||||| |||||
Sbjct 3216 AACTTATTTAAAGAGTTTGATATAAATAACCACAGCCACAAGAAATCGTATAGAGCTATA 3157
Query 1822 GAAAATCTAGAATAGAAAT 1840
| |||||||||||||| ||
Sbjct 3156 GCAAATCTAGAATAGAGAT 3138
>seq1896
Length=105120
Score = 93.3 bits (102), Expect = 8e-16
Identities = 96/126 (76%), Gaps = 11/126 (9%)
Strand=Plus/Plus
Query 1719 TAGCTAATGCTTATATCCTATATTTACCTCTTTAAGATATA----TAAACTTATTTAAAG 1774
|||||| |||| | ||||| | | || ||| |||||||| |||| |||||||||
Sbjct 45655 TAGCTAGTGCTATAACCCTATTTATTCCCCTTCAAGATATAAGTATAAAATTATTTAAAC 45714
Query 1775 AGTTAAATATAAAATACCACAGCCACAGGAAATTCTATAGTTCTATAGAAAATCTAGAAT 1834
|||||||||||||||||||| |||||| |||| |||||| |||||||| ||
Sbjct 45715 -------TATAAAATACCACAGCCACAAGAAATTATATAAAGCTATAGTAAATCTAGGAT 45767
Query 1835 AGAAAT 1840
||||||
Sbjct 45768 AGAAAT 45773
>seq1668
Length=82418
Score = 77.0 bits (84), Expect = 6e-11
Identities = 79/104 (76%), Gaps = 11/104 (11%)
Strand=Plus/Minus
Query 1743 TACCTCTTTAAGATATA----TAAACTTATTTAAAGAGTTAAATATAAAATACCACAGCC 1798
|||||||| |||||||| |||| ||||| ||| |||||||||||||| ||
Sbjct 67450 TACCTCTTCAAGATATAAGTATAAAATTATTAAAAC-------TATAAAATACCACACCC 67398
Query 1799 ACAGGAAATTCTATAGTTCTATAGAAAATCTAGAATAGAAATAT 1842
||| ||||| |||| |||||| |||||||| ||||||| ||
Sbjct 67397 ACAAGAAATCATATAAAGCTATAGTAAATCTAGGATAGAAACAT 67354
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 9242191131885
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |