Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Operophtera_20brumata_20[genbank_20GCA_5F001266575.1_202015-08-11] 25,801 sequences; 638,207,720 total letters Query= NC_008901.1 Length=2930 Score E Sequences producing significant alignments: (Bits) Value seq6422 91.5 3e-15 seq9855 87.8 3e-14 seq2447 86.0 1e-13 >seq6422 Length=30189 Score = 91.5 bits (100), Expect = 3e-15 Identities = 100/129 (78%), Gaps = 3/129 (2%) Strand=Plus/Minus Query 816 GGCTGCCAGATTCTA-TCCTAGATTTTCTATAGCCTTACATTAATTTCTGTGGCTATGGT 874 |||||||| |||||| | ||||| || | ||||| || |||| || | |||||| |||| Sbjct 21243 GGCTGCCA-ATTCTAGTACTAGACTTACCATAGCTCTATATTATTTCCCGTGGCTGTGGT 21185 Query 875 AGTTTATAAATAACTCTTTTAATAATTATAATTATCTTAAAGAGGTAAATTATAGTAAAT 934 | |||||| ||||||||| |||| | || ||||||||||||||| | |||| | || Sbjct 21184 ATTTTATATGTAACTCTTTACATAAGTTTATATATCTTAAAGAGGTATA-AATAGCATAT 21126 Query 935 AGCATTAGC 943 || || ||| Sbjct 21125 AGTATAAGC 21117 >seq9855 Length=15086 Score = 87.8 bits (96), Expect = 3e-14 Identities = 95/122 (78%), Gaps = 3/122 (2%) Strand=Plus/Minus Query 816 GGCTGCCAGATTCTA-TCCTAGATTTTCTATAGCCTTACATTAATTTCTGTGGCTATGGT 874 |||||||| |||||| | ||||| || | ||||| || |||| || | |||||| |||| Sbjct 3259 GGCTGCCA-ATTCTAGTACTAGACTTACCATAGCTCTATATTATTTCCCGTGGCTGTGGT 3201 Query 875 AGTTTATAAATAACTCTTTTAATAATTATAATTATCTTAAAGAGGTAAATTATAGTAAAT 934 | |||||| ||||||||| |||| | || ||||||||||||||| | |||| | || Sbjct 3200 ATTTTATATGTAACTCTTTACATAAGTTTATATATCTTAAAGAGGTATA-AATAGCATAT 3142 Query 935 AG 936 || Sbjct 3141 AG 3140 >seq2447 Length=64305 Score = 86.0 bits (94), Expect = 1e-13 Identities = 90/117 (77%), Gaps = 1/117 (1%) Strand=Plus/Plus Query 827 TCTATCCTAGATTTTCTATAGCCTTACATTAATTTCTGTGGCTATGGTAGTTTATAAATA 886 ||||| |||||||| ||||||| || | | || ||||||| |||| |||||| | Sbjct 3141 TCTATTCTAGATTTGCTATAGCTCTATACGATTTCTTGTGGCTGTGGTTATTTATATCAA 3200 Query 887 ACTCTTTTAATAATTATAATTATCTTAAAGAGGTAAATTATAGTAAATAGCATTAGC 943 ||||||| ||||| | || ||||||||||||||| | |||| |||||| | |||| Sbjct 3201 ACTCTTTAAATAAGTTTATATATCTTAAAGAGGTATA-AATAGGAAATAGAACTAGC 3256 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 9261385713675