Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Operophtera_20brumata_20[genbank_20GCA_5F001266575.1_202015-08-11] 25,801 sequences; 638,207,720 total letters Query= NC_008903.1 Length=2934 Score E Sequences producing significant alignments: (Bits) Value seq2447 127 4e-26 seq6422 122 2e-24 seq9855 120 6e-24 >seq2447 Length=64305 Score = 127 bits (140), Expect = 4e-26 Identities = 129/163 (79%), Gaps = 4/163 (2%) Strand=Plus/Plus Query 2690 TGGCGAGCCAT-TCTAATCCTAGATTAACTATAGATCTCATAGTATTCTTTCGTGGCTGT 2748 ||||| |||| |||| || |||||| |||||| ||| ||| ||| || |||||||| Sbjct 3129 TGGCGGACCATCTCTATTC-TAGATTTGCTATAGCTCT-ATACGATTTCTT-GTGGCTGT 3185 Query 2749 GGTATTTTATATATAACTCTTTAAATAATGTTATATATCTTAAAGAGGTATAAGTAGCAA 2808 ||| ||||||| |||||||||||||| ||||||||||||||||||||||| ||| || Sbjct 3186 GGTTATTTATATCAAACTCTTTAAATAAGTTTATATATCTTAAAGAGGTATAAATAGGAA 3245 Query 2809 ATAAGACTAGCTAAATAAGCAGGAAGATATTACAATGAGCATA 2851 ||| |||||||| ||| || || ||||| ||| ||| || Sbjct 3246 ATAGAACTAGCTATATAGTTAGAAATGTATTATAATAAGCGTA 3288 >seq6422 Length=30189 Score = 122 bits (134), Expect = 2e-24 Identities = 103/124 (83%), Gaps = 2/124 (2%) Strand=Plus/Minus Query 2699 ATTCTAATCCTAGATTAACTATAGATCTCATAGTATTCTTTCGTGGCTGTGGTATTTTAT 2758 |||||| | ||||| | || |||| ||| ||| |||| | ||||||||||||||||||| Sbjct 21235 ATTCTAGTACTAGACTTACCATAGCTCT-ATATTATT-TCCCGTGGCTGTGGTATTTTAT 21178 Query 2759 ATATAACTCTTTAAATAATGTTATATATCTTAAAGAGGTATAAGTAGCAAATAAGACTAG 2818 || |||||||||| |||| ||||||||||||||||||||||| ||||| ||| | || Sbjct 21177 ATGTAACTCTTTACATAAGTTTATATATCTTAAAGAGGTATAAATAGCATATAGTATAAG 21118 Query 2819 CTAA 2822 |||| Sbjct 21117 CTAA 21114 >seq9855 Length=15086 Score = 120 bits (132), Expect = 6e-24 Identities = 96/113 (85%), Gaps = 2/113 (2%) Strand=Plus/Minus Query 2699 ATTCTAATCCTAGATTAACTATAGATCTCATAGTATTCTTTCGTGGCTGTGGTATTTTAT 2758 |||||| | ||||| | || |||| ||| ||| |||| | ||||||||||||||||||| Sbjct 3251 ATTCTAGTACTAGACTTACCATAGCTCT-ATATTATT-TCCCGTGGCTGTGGTATTTTAT 3194 Query 2759 ATATAACTCTTTAAATAATGTTATATATCTTAAAGAGGTATAAGTAGCAAATA 2811 || |||||||||| |||| ||||||||||||||||||||||| ||||| ||| Sbjct 3193 ATGTAACTCTTTACATAAGTTTATATATCTTAAAGAGGTATAAATAGCATATA 3141 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 9274182101535