Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Operophtera_20brumata_20[genbank_20GCA_5F001266575.1_202015-08-11] 25,801 sequences; 638,207,720 total letters Query= NC_008905.1 Length=2997 Score E Sequences producing significant alignments: (Bits) Value seq9855 107 4e-20 seq6422 107 4e-20 >seq9855 Length=15086 Score = 107 bits (118), Expect = 4e-20 Identities = 203/288 (70%), Gaps = 12/288 (4%) Strand=Plus/Plus Query 772 TTTTTGGGAAAAAGTATCTGGCACACAGATTGGGTATATTTGGGCTTGTAAAAACTCACC 831 |||||| ||||| || ||| || || ||| ||| || | | ||||| ||| | ||| Sbjct 2855 TTTTTGAAAAAAATTACCTGCTACTCATGTTGATTATTTTCGTGGTTGTAGAAAGTTACC 2914 Query 832 -TTCGAGAATCACAGTCC--TGATCCAGGGCTCGTTGGTTTCCTCTCGTCAAGACGAATC 888 ||| || |||| ||| |||| ||||| | || |||||| |||||||||||||| Sbjct 2915 CTTCAAGG-TCACCCTCCCGTGATTA--GGCTCATCGGATTCCTCGCGTCAAGACGAATC 2971 Query 889 CAATGAGCTCATATTCGATTAAAAATGTCCACGTGATGTGCTTGA--GCAACAGTGTGGC 946 ||| | | ||| |||| ||||||| | || || || | || | || ||||| Sbjct 2972 CAACGGGTCCATGGTCGACCAAAAATGGCTACTGGAAGTCCCCGATTGGAAATTGGTGGC 3031 Query 947 GAGTGTGGCGGGACAAATCTATCCCGCTCTTAGCTTATATTTATACTATAATTTCATACA 1006 | ||||||| | || ||| ||| | | || ||||||| ||||||||| ||||||| | Sbjct 3032 GGGTGTGGCAGCCCAGATC-ATCACAC-CTCAGCTTAT-GCTATACTATATTTTCATATA 3088 Query 1007 GCTTATAGTGGTTATGCTACATAGCATTACATACTTAGCTATATAGCT 1054 ||| || ||| ||||| |||||| ||||| ||||| | ||||| Sbjct 3089 ACTTTTATTGGCTATGCCCTATAGCAATACATTTCTAGCTGT-TAGCT 3135 >seq6422 Length=30189 Score = 107 bits (118), Expect = 4e-20 Identities = 203/288 (70%), Gaps = 12/288 (4%) Strand=Plus/Plus Query 772 TTTTTGGGAAAAAGTATCTGGCACACAGATTGGGTATATTTGGGCTTGTAAAAACTCACC 831 |||||| ||||| || ||| || || ||| ||| || | | ||||| ||| | ||| Sbjct 20839 TTTTTGAAAAAAATTACCTGCTACTCATGTTGATTATTTTCGTGGTTGTAGAAAGTTACC 20898 Query 832 -TTCGAGAATCACAGTCC--TGATCCAGGGCTCGTTGGTTTCCTCTCGTCAAGACGAATC 888 ||| || |||| ||| |||| ||||| | || |||||| |||||||||||||| Sbjct 20899 CTTCAAGG-TCACCCTCCCGTGATTA--GGCTCATCGGATTCCTCGCGTCAAGACGAATC 20955 Query 889 CAATGAGCTCATATTCGATTAAAAATGTCCACGTGATGTGCTTGA--GCAACAGTGTGGC 946 ||| | | ||| |||| ||||||| | || || || | || | || ||||| Sbjct 20956 CAACGGGTCCATGGTCGACCAAAAATGGCTACTGGAAGTCCCCGATTGGAAATTGGTGGC 21015 Query 947 GAGTGTGGCGGGACAAATCTATCCCGCTCTTAGCTTATATTTATACTATAATTTCATACA 1006 | ||||||| | || ||| ||| | | || ||||||| ||||||||| ||||||| | Sbjct 21016 GGGTGTGGCAGCCCAGATC-ATCTCAC-CTCAGCTTAT-GCTATACTATATTTTCATATA 21072 Query 1007 GCTTATAGTGGTTATGCTACATAGCATTACATACTTAGCTATATAGCT 1054 ||| || ||| ||||| |||||| ||||| ||||| | ||||| Sbjct 21073 ACTTTTATTGGCTATGCCCTATAGCAATACATTTCTAGCTGT-TAGCT 21119 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 9475725210330