Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Operophtera_20brumata_20[genbank_20GCA_5F001266575.1_202015-08-11]
25,801 sequences; 638,207,720 total letters
Query= NC_008906.1
Length=3036
Score E
Sequences producing significant alignments: (Bits) Value
seq6422 168 1e-38
seq9855 163 5e-37
>seq6422
Length=30189
Score = 168 bits (186), Expect = 1e-38
Identities = 161/204 (79%), Gaps = 8/204 (4%)
Strand=Plus/Plus
Query 1598 AGCTTATAGTATAAGACTATATATACTtatac----tagtgtctattttctatagcatca 1653
||||||| |||| |||||| | | |||| || || |||| |||||||| |
Sbjct 21045 AGCTTATGCTATA---CTATATTTTCATATAACTTTTATTGGCTATGCCCTATAGCAATA 21101
Query 1654 tatttctagctatatagctagtattatattatatttatacctatttaagatatatataat 1713
|||||||||| | ||||| || ||||| ||||||||||| ||||||||||||| | |
Sbjct 21102 CATTTCTAGCTGT-TAGCTTATACTATATGCTATTTATACCTCTTTAAGATATATAAACT 21160
Query 1714 tatgaaaagagttatatataaaataCCACAGCCACCGGAAATAATGTAAGGCTATAGGAA 1773
|||| ||||||||| |||||||||||||||||||| ||||||||| || ||||| | ||
Sbjct 21161 TATGTAAAGAGTTACATATAAAATACCACAGCCACGGGAAATAATATAGAGCTATGGTAA 21220
Query 1774 ATCTAGTATTGAAATTGGCAGCCA 1797
||||||| | ||||||||||||
Sbjct 21221 GTCTAGTACTAGAATTGGCAGCCA 21244
>seq9855
Length=15086
Score = 163 bits (180), Expect = 5e-37
Identities = 160/204 (78%), Gaps = 8/204 (4%)
Strand=Plus/Plus
Query 1598 AGCTTATAGTATAAGACTATATATACTtatac----tagtgtctattttctatagcatca 1653
||||||| |||| |||||| | | |||| || || |||| |||||||| |
Sbjct 3061 AGCTTATGCTATA---CTATATTTTCATATAACTTTTATTGGCTATGCCCTATAGCAATA 3117
Query 1654 tatttctagctatatagctagtattatattatatttatacctatttaagatatatataat 1713
|||||||||| | ||||| | ||||| ||||||||||| ||||||||||||| | |
Sbjct 3118 CATTTCTAGCTGT-TAGCTTACACTATATGCTATTTATACCTCTTTAAGATATATAAACT 3176
Query 1714 tatgaaaagagttatatataaaataCCACAGCCACCGGAAATAATGTAAGGCTATAGGAA 1773
|||| ||||||||| |||||||||||||||||||| ||||||||| || ||||| | ||
Sbjct 3177 TATGTAAAGAGTTACATATAAAATACCACAGCCACGGGAAATAATATAGAGCTATGGTAA 3236
Query 1774 ATCTAGTATTGAAATTGGCAGCCA 1797
||||||| | ||||||||||||
Sbjct 3237 GTCTAGTACTAGAATTGGCAGCCA 3260
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 9600489991965
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |