Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Operophtera_20brumata_20[genbank_20GCA_5F001266575.1_202015-08-11] 25,801 sequences; 638,207,720 total letters Query= NC_008906.1 Length=3036 Score E Sequences producing significant alignments: (Bits) Value seq6422 168 1e-38 seq9855 163 5e-37 >seq6422 Length=30189 Score = 168 bits (186), Expect = 1e-38 Identities = 161/204 (79%), Gaps = 8/204 (4%) Strand=Plus/Plus Query 1598 AGCTTATAGTATAAGACTATATATACTtatac----tagtgtctattttctatagcatca 1653 ||||||| |||| |||||| | | |||| || || |||| |||||||| | Sbjct 21045 AGCTTATGCTATA---CTATATTTTCATATAACTTTTATTGGCTATGCCCTATAGCAATA 21101 Query 1654 tatttctagctatatagctagtattatattatatttatacctatttaagatatatataat 1713 |||||||||| | ||||| || ||||| ||||||||||| ||||||||||||| | | Sbjct 21102 CATTTCTAGCTGT-TAGCTTATACTATATGCTATTTATACCTCTTTAAGATATATAAACT 21160 Query 1714 tatgaaaagagttatatataaaataCCACAGCCACCGGAAATAATGTAAGGCTATAGGAA 1773 |||| ||||||||| |||||||||||||||||||| ||||||||| || ||||| | || Sbjct 21161 TATGTAAAGAGTTACATATAAAATACCACAGCCACGGGAAATAATATAGAGCTATGGTAA 21220 Query 1774 ATCTAGTATTGAAATTGGCAGCCA 1797 ||||||| | |||||||||||| Sbjct 21221 GTCTAGTACTAGAATTGGCAGCCA 21244 >seq9855 Length=15086 Score = 163 bits (180), Expect = 5e-37 Identities = 160/204 (78%), Gaps = 8/204 (4%) Strand=Plus/Plus Query 1598 AGCTTATAGTATAAGACTATATATACTtatac----tagtgtctattttctatagcatca 1653 ||||||| |||| |||||| | | |||| || || |||| |||||||| | Sbjct 3061 AGCTTATGCTATA---CTATATTTTCATATAACTTTTATTGGCTATGCCCTATAGCAATA 3117 Query 1654 tatttctagctatatagctagtattatattatatttatacctatttaagatatatataat 1713 |||||||||| | ||||| | ||||| ||||||||||| ||||||||||||| | | Sbjct 3118 CATTTCTAGCTGT-TAGCTTACACTATATGCTATTTATACCTCTTTAAGATATATAAACT 3176 Query 1714 tatgaaaagagttatatataaaataCCACAGCCACCGGAAATAATGTAAGGCTATAGGAA 1773 |||| ||||||||| |||||||||||||||||||| ||||||||| || ||||| | || Sbjct 3177 TATGTAAAGAGTTACATATAAAATACCACAGCCACGGGAAATAATATAGAGCTATGGTAA 3236 Query 1774 ATCTAGTATTGAAATTGGCAGCCA 1797 ||||||| | |||||||||||| Sbjct 3237 GTCTAGTACTAGAATTGGCAGCCA 3260 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 9600489991965