Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Operophtera_20brumata_20[genbank_20GCA_5F001266575.1_202015-08-11] 25,801 sequences; 638,207,720 total letters Query= NC_008913.1 Length=3157 Score E Sequences producing significant alignments: (Bits) Value seq9855 91.5 3e-15 seq6422 91.5 3e-15 >seq9855 Length=15086 Score = 91.5 bits (100), Expect = 3e-15 Identities = 211/308 (69%), Gaps = 20/308 (6%) Strand=Plus/Minus Query 1311 AAATACATTGCTATAGAACGTAGCCGCTATAAGTTGTATGAATATATATCGTATAAATAT 1370 |||| |||||||||| | ||||| || ||||| |||||| ||||| ||||| || Sbjct 3122 AAATGTATTGCTATAGGGCATAGCCAATAAAAGTTATATGAAAATATA--GTATAGC-AT 3066 Query 1371 AAGTTGAGGCGGGACAGGAT-TAACCCGCCATACCCGCCAC--ATCGCCATTCAGGCACA 1427 ||| ||||| | || ||| | | |||| ||||||||| || ||| || || || Sbjct 3065 AAGCTGAGGTGTGAT--GATCTGGGCTGCCACACCCGCCACCAATTTCCAATCGGGGACT 3008 Query 1428 TCACGTGGACATTTTGCATCGAACATGAGCTCATTGGATTCGTCTCGGCGAGAGAAACTC 1487 || || | |||||| |||| |||| | | |||||||||||| | || ||| || | Sbjct 3007 TCCAGTAGCCATTTTTGGTCGACCATGGACCCGTTGGATTCGTCTTGACGCGAGGAATCC 2948 Query 1488 AACGAGCCCTAAATCA--GGGCTGTGATTTTTGAGGTTACATTTTTACAAGTCCAAATGT 1545 | ||||| ||||| || |||| || ||| || ||| ||||| | || | Sbjct 2947 GATGAGCC--TAATCACGGGAGGGTGACCTTGAAGGGTAACTTTCTACAACCACGAAAAT 2890 Query 1546 ATTCAACATGCGTGGCAGTCACTTTGTTTTCCGAAAA---ATTCCTCTTTTCAATTGCAA 1602 | |||||||| || |||| | ||| ||||| |||| ||||| ||||| |||| Sbjct 2889 AATCAACATGAGTAGCAGGTAATTT-TTTTCAAAAAATGTATTCC----CTCAATCGCAA 2835 Query 1603 TTGGTGAT 1610 || |||| Sbjct 2834 TTAATGAT 2827 >seq6422 Length=30189 Score = 91.5 bits (100), Expect = 3e-15 Identities = 211/308 (69%), Gaps = 20/308 (6%) Strand=Plus/Minus Query 1311 AAATACATTGCTATAGAACGTAGCCGCTATAAGTTGTATGAATATATATCGTATAAATAT 1370 |||| |||||||||| | ||||| || ||||| |||||| ||||| ||||| || Sbjct 21106 AAATGTATTGCTATAGGGCATAGCCAATAAAAGTTATATGAAAATATA--GTATAGC-AT 21050 Query 1371 AAGTTGAGGCGGGACAGGAT-TAACCCGCCATACCCGCCAC--ATCGCCATTCAGGCACA 1427 ||| ||||| | || ||| | | |||| ||||||||| || ||| || || || Sbjct 21049 AAGCTGAGGTGAGAT--GATCTGGGCTGCCACACCCGCCACCAATTTCCAATCGGGGACT 20992 Query 1428 TCACGTGGACATTTTGCATCGAACATGAGCTCATTGGATTCGTCTCGGCGAGAGAAACTC 1487 || || | |||||| |||| |||| | | |||||||||||| | || ||| || | Sbjct 20991 TCCAGTAGCCATTTTTGGTCGACCATGGACCCGTTGGATTCGTCTTGACGCGAGGAATCC 20932 Query 1488 AACGAGCCCTAAATCA--GGGCTGTGATTTTTGAGGTTACATTTTTACAAGTCCAAATGT 1545 | ||||| ||||| || |||| || ||| || ||| ||||| | || | Sbjct 20931 GATGAGCC--TAATCACGGGAGGGTGACCTTGAAGGGTAACTTTCTACAACCACGAAAAT 20874 Query 1546 ATTCAACATGCGTGGCAGTCACTTTGTTTTCCGAAAA---ATTCCTCTTTTCAATTGCAA 1602 | |||||||| || |||| | ||| ||||| |||| ||||| ||||| |||| Sbjct 20873 AATCAACATGAGTAGCAGGTAATTT-TTTTCAAAAAATGTATTCC----CTCAATCGCAA 20819 Query 1603 TTGGTGAT 1610 || |||| Sbjct 20818 TTAATGAT 20811 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 9987580724730