Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Operophtera_20brumata_20[genbank_20GCA_5F001266575.1_202015-08-11]
25,801 sequences; 638,207,720 total letters
Query= NC_008914.1
Length=3243
Score E
Sequences producing significant alignments: (Bits) Value
seq2447 131 3e-27
seq6422 118 2e-23
seq9855 116 8e-23
>seq2447
Length=64305
Score = 131 bits (144), Expect = 3e-27
Identities = 130/163 (80%), Gaps = 4/163 (2%)
Strand=Plus/Minus
Query 1721 TATGCTCATTATAATATATTCCTGCTTATTTAGCTAGTCTTATTTGCTACTTATACCTCT 1780
|| ||| ||||||||| ||| || ||| |||||||| ||||| ||| ||||||||||
Sbjct 3288 TACGCTTATTATAATACATTTCTAACTATATAGCTAGTTCTATTTCCTATTTATACCTCT 3229
Query 1781 TTAAGATATATAACATTATTTAAAGAGTTATATATAAAATACCACAGCCACGAAAGAATA 1840
||||||||||||| |||||||||||||| ||||||| ||||||||||| || |||
Sbjct 3228 TTAAGATATATAAACTTATTTAAAGAGTTTGATATAAATAACCACAGCCAC-AAGAAATC 3170
Query 1841 CTATAAGATCTATAGTTAATTTAGGATTAGA-ATGGCTCGCCA 1882
||| ||| |||||| ||| || || |||| |||| |||||
Sbjct 3169 GTAT-AGAGCTATAGCAAATCTA-GAATAGAGATGGTCCGCCA 3129
>seq6422
Length=30189
Score = 118 bits (130), Expect = 2e-23
Identities = 102/124 (82%), Gaps = 2/124 (2%)
Strand=Plus/Plus
Query 1750 TTAGCTAGTCTTATTTGCTACTTATACCTCTTTAAGATATATAACATTATTTAAAGAGTT 1809
|||||| | ||| ||||| ||||||||||||||||||||||| |||| |||||||||
Sbjct 21114 TTAGCTTATACTATATGCTATTTATACCTCTTTAAGATATATAAACTTATGTAAAGAGTT 21173
Query 1810 ATATATAAAATACCACAGCCACGAAAGAATACTATAAGATCTATAGTTAATTTAGGATTA 1869
| ||||||||||||||||||||| | |||| ||| ||| |||| || | | ||| | ||
Sbjct 21174 ACATATAAAATACCACAGCCACGGGA-AATAATAT-AGAGCTATGGTAAGTCTAGTACTA 21231
Query 1870 GAAT 1873
||||
Sbjct 21232 GAAT 21235
>seq9855
Length=15086
Score = 116 bits (128), Expect = 8e-23
Identities = 95/113 (84%), Gaps = 2/113 (2%)
Strand=Plus/Plus
Query 1761 TATTTGCTACTTATACCTCTTTAAGATATATAACATTATTTAAAGAGTTATATATAAAAT 1820
||| ||||| ||||||||||||||||||||||| |||| |||||||||| |||||||||
Sbjct 3141 TATATGCTATTTATACCTCTTTAAGATATATAAACTTATGTAAAGAGTTACATATAAAAT 3200
Query 1821 ACCACAGCCACGAAAGAATACTATAAGATCTATAGTTAATTTAGGATTAGAAT 1873
|||||||||||| | |||| ||| ||| |||| || | | ||| | ||||||
Sbjct 3201 ACCACAGCCACGGGA-AATAATAT-AGAGCTATGGTAAGTCTAGTACTAGAAT 3251
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 10262703063720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |