Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Operophtera_20brumata_20[genbank_20GCA_5F001266575.1_202015-08-11] 25,801 sequences; 638,207,720 total letters Query= NC_008915.1 Length=3307 Score E Sequences producing significant alignments: (Bits) Value seq9855 78.8 2e-11 seq6422 78.8 2e-11 >seq9855 Length=15086 Score = 78.8 bits (86), Expect = 2e-11 Identities = 111/151 (74%), Gaps = 5/151 (3%) Strand=Plus/Plus Query 3036 GCGATTGAAATGATGAAtttttttAAAAAACTT-CCTGCTACACATTTTGGGTATAT-CG 3093 |||||||| || ||||||| |||||| || |||||||| ||| ||| ||| | || Sbjct 2837 GCGATTGAGGGAATACATTTTTTGAAAAAAATTACCTGCTACTCATGTTGATTATTTTCG 2896 Query 3094 AGACTTGGGAGAACCTTAAGGTTGGAT-TAACACGCCCGTGATAAGGTTCATTGATTTCC 3152 | | | |||| ||| || | | || | |||||||| ||| |||| | |||| Sbjct 2897 TGGTT--GTAGAAAGTTACCCTTCAAGGTCACCCTCCCGTGATTAGGCTCATCGGATTCC 2954 Query 3153 TCTCGTCAAGACGAATCCAACGGGCCCATGG 3183 || ||||||||||||||||||||| |||||| Sbjct 2955 TCGCGTCAAGACGAATCCAACGGGTCCATGG 2985 >seq6422 Length=30189 Score = 78.8 bits (86), Expect = 2e-11 Identities = 111/151 (74%), Gaps = 5/151 (3%) Strand=Plus/Plus Query 3036 GCGATTGAAATGATGAAtttttttAAAAAACTT-CCTGCTACACATTTTGGGTATAT-CG 3093 |||||||| || ||||||| |||||| || |||||||| ||| ||| ||| | || Sbjct 20821 GCGATTGAGGGAATACATTTTTTGAAAAAAATTACCTGCTACTCATGTTGATTATTTTCG 20880 Query 3094 AGACTTGGGAGAACCTTAAGGTTGGAT-TAACACGCCCGTGATAAGGTTCATTGATTTCC 3152 | | | |||| ||| || | | || | |||||||| ||| |||| | |||| Sbjct 20881 TGGTT--GTAGAAAGTTACCCTTCAAGGTCACCCTCCCGTGATTAGGCTCATCGGATTCC 20938 Query 3153 TCTCGTCAAGACGAATCCAACGGGCCCATGG 3183 || ||||||||||||||||||||| |||||| Sbjct 20939 TCGCGTCAAGACGAATCCAACGGGTCCATGG 20969 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 10467445269480