Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Operophtera_20brumata_20[genbank_20GCA_5F001266575.1_202015-08-11]
25,801 sequences; 638,207,720 total letters
Query= NC_008916.1
Length=3331
Score E
Sequences producing significant alignments: (Bits) Value
seq9855 122 2e-24
seq6422 122 2e-24
seq2447 113 1e-21
>seq9855
Length=15086
Score = 122 bits (134), Expect = 2e-24
Identities = 84/95 (88%), Gaps = 0/95 (0%)
Strand=Plus/Plus
Query 2178 TATATATACCTCTTTAAGATATATAACTTTATTTAAAGAGTTACTTATAAAATACCACAG 2237
||| |||||||||||||||||||||| |||| ||||||||||| |||||||||||||||
Sbjct 3148 TATTTATACCTCTTTAAGATATATAAACTTATGTAAAGAGTTACATATAAAATACCACAG 3207
Query 2238 CCACGCGAAATAATATAGGCCTATAGAAAATCTAG 2272
||||| |||||||||||| |||| | || |||||
Sbjct 3208 CCACGGGAAATAATATAGAGCTATGGTAAGTCTAG 3242
>seq6422
Length=30189
Score = 122 bits (134), Expect = 2e-24
Identities = 84/95 (88%), Gaps = 0/95 (0%)
Strand=Plus/Plus
Query 2178 TATATATACCTCTTTAAGATATATAACTTTATTTAAAGAGTTACTTATAAAATACCACAG 2237
||| |||||||||||||||||||||| |||| ||||||||||| |||||||||||||||
Sbjct 21132 TATTTATACCTCTTTAAGATATATAAACTTATGTAAAGAGTTACATATAAAATACCACAG 21191
Query 2238 CCACGCGAAATAATATAGGCCTATAGAAAATCTAG 2272
||||| |||||||||||| |||| | || |||||
Sbjct 21192 CCACGGGAAATAATATAGAGCTATGGTAAGTCTAG 21226
>seq2447
Length=64305
Score = 113 bits (124), Expect = 1e-21
Identities = 102/127 (80%), Gaps = 1/127 (1%)
Strand=Plus/Minus
Query 2175 TCTTATATATACCTCTTTAAGATATATAACTTTATTTAAAGAGTTACTTATAAAATACCA 2234
|| ||| |||||||||||||||||||||| |||||||||||||| |||||| ||||
Sbjct 3244 TCCTATTTATACCTCTTTAAGATATATAAACTTATTTAAAGAGTTTGATATAAATAACCA 3185
Query 2235 CAGCCACGCGAAATAATATAGGCCTATAGAAAATCTAGAATTGAAAAGTTTAGCCATACC 2294
||||||| ||||| ||||| |||||| ||||||||||| || | | | |||| ||
Sbjct 3184 CAGCCACAAGAAATCGTATAGAGCTATAGCAAATCTAGAATAGAGATGGTCCGCCA-CCC 3126
Query 2295 AGCCACA 2301
| |||||
Sbjct 3125 AACCACA 3119
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 10544223596640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |